Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 MIR4303-201ENST00000581299 66 ntBASIC1.27□□□□□ -2.21
HMGN4O00479 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.27□□□□□ -2.21
HMGN4O00479 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.27□□□□□ -2.21
HMGN4O00479 OR10AB1P-201ENST00000609613 938 ntBASIC1.27□□□□□ -2.21
HMGN4O00479 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.27□□□□□ -2.21
HMGN4O00479 ZNF72P-201ENST00000425869 1908 ntBASIC1.27□□□□□ -2.21
HMGN4O00479 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
HMGN4O00479 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
HMGN4O00479 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
HMGN4O00479 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
HMGN4O00479 MIR758-201ENST00000390227 88 ntBASIC1.26□□□□□ -2.21
HMGN4O00479 AL021407.1-201ENST00000404531 386 ntBASIC1.26□□□□□ -2.21
HMGN4O00479 RPS15AP38-201ENST00000413110 372 ntBASIC1.26□□□□□ -2.21
HMGN4O00479 SEPT2P1-201ENST00000419651 180 ntBASIC1.26□□□□□ -2.21
HMGN4O00479 ARPC3P1-201ENST00000437218 533 ntBASIC1.26□□□□□ -2.21
HMGN4O00479 AC023512.1-201ENST00000444513 499 ntBASIC1.26□□□□□ -2.21
HMGN4O00479 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.26□□□□□ -2.21
HMGN4O00479 BX248409.1-201ENST00000455497 255 ntBASIC1.26□□□□□ -2.21
HMGN4O00479 CABYRP1-201ENST00000465493 1045 ntBASIC1.26□□□□□ -2.21
HMGN4O00479 HMGB3P17-201ENST00000504195 649 ntBASIC1.26□□□□□ -2.21
HMGN4O00479 AP005597.4-201ENST00000526762 229 ntBASIC1.26□□□□□ -2.21
HMGN4O00479 AC090888.1-201ENST00000561335 1141 ntBASIC1.26□□□□□ -2.21
HMGN4O00479 AC068338.1-201ENST00000565567 176 ntBASIC1.26□□□□□ -2.21
HMGN4O00479 AC002487.1-201ENST00000604565 994 ntBASIC1.26□□□□□ -2.21
HMGN4O00479 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
HMGN4O00479 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
HMGN4O00479 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.26□□□□□ -2.21
HMGN4O00479 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
HMGN4O00479 AL513185.3-201ENST00000433335 1300 ntBASIC1.25□□□□□ -2.21
HMGN4O00479 U8.3-201ENST00000363321 132 ntBASIC1.25□□□□□ -2.21
HMGN4O00479 RNU6-452P-201ENST00000384406 107 ntBASIC1.25□□□□□ -2.21
HMGN4O00479 PTGES3P2-201ENST00000407942 482 ntBASIC1.25□□□□□ -2.21
HMGN4O00479 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.25□□□□□ -2.21
HMGN4O00479 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.25□□□□□ -2.21
HMGN4O00479 PAICSP7-201ENST00000419829 962 ntBASIC1.25□□□□□ -2.21
HMGN4O00479 RPL7L1P10-201ENST00000427790 463 ntBASIC1.25□□□□□ -2.21
HMGN4O00479 RPL35AP22-201ENST00000436855 335 ntBASIC1.25□□□□□ -2.21
HMGN4O00479 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.25□□□□□ -2.21
HMGN4O00479 AC092155.2-201ENST00000454675 477 ntBASIC1.25□□□□□ -2.21
HMGN4O00479 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.25□□□□□ -2.21
HMGN4O00479 PNPLA4P1-201ENST00000458328 305 ntBASIC1.25□□□□□ -2.21
HMGN4O00479 AC087588.1-201ENST00000462203 316 ntBASIC1.25□□□□□ -2.21
HMGN4O00479 MTCYBP18-201ENST00000501056 747 ntBASIC1.25□□□□□ -2.21
HMGN4O00479 CBX3P3-201ENST00000508108 532 ntBASIC1.25□□□□□ -2.21
HMGN4O00479 AP003033.1-201ENST00000527244 415 ntBASIC1.25□□□□□ -2.21
HMGN4O00479 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.25□□□□□ -2.21
HMGN4O00479 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.25□□□□□ -2.21
HMGN4O00479 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.25□□□□□ -2.21
HMGN4O00479 AL627230.6-201ENST00000611129 280 ntBASIC1.25□□□□□ -2.21
HMGN4O00479 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
HMGN4O00479 AL161423.1-201ENST00000613700 262 ntBASIC1.25□□□□□ -2.21
HMGN4O00479 AC010872.1-201ENST00000624225 675 ntBASIC1.25□□□□□ -2.21
HMGN4O00479 RNU1-17P-201ENST00000363022 152 ntBASIC1.24□□□□□ -2.21
HMGN4O00479 RNU6-203P-201ENST00000384038 104 ntBASIC1.24□□□□□ -2.21
HMGN4O00479 MIR676-201ENST00000390702 67 ntBASIC1.24□□□□□ -2.21
HMGN4O00479 AC092745.2-202ENST00000411880 369 ntBASIC1.24□□□□□ -2.21
HMGN4O00479 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.24□□□□□ -2.21
HMGN4O00479 AC079780.1-201ENST00000428259 207 ntBASIC1.24□□□□□ -2.21
HMGN4O00479 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.24□□□□□ -2.21
HMGN4O00479 RPS15AP27-201ENST00000449183 343 ntBASIC1.24□□□□□ -2.21
HMGN4O00479 MTATP6P7-201ENST00000453315 681 ntBASIC1.24□□□□□ -2.21
HMGN4O00479 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC1.24□□□□□ -2.21
HMGN4O00479 HMGN2P23-201ENST00000456759 269 ntBASIC1.24□□□□□ -2.21
HMGN4O00479 RPS15AP36-201ENST00000492022 382 ntBASIC1.24□□□□□ -2.21
HMGN4O00479 RNF138P1-201ENST00000502765 546 ntBASIC1.24□□□□□ -2.21
HMGN4O00479 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.24□□□□□ -2.21
HMGN4O00479 MLLT10P2-201ENST00000506434 249 ntBASIC1.24□□□□□ -2.21
HMGN4O00479 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.24□□□□□ -2.21
HMGN4O00479 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.24□□□□□ -2.21
HMGN4O00479 MRPS36P2-201ENST00000512569 299 ntBASIC1.24□□□□□ -2.21
HMGN4O00479 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.24□□□□□ -2.21
HMGN4O00479 AC023813.2-201ENST00000564321 469 ntBASIC1.24□□□□□ -2.21
HMGN4O00479 MIR4504-201ENST00000577413 92 ntBASIC1.24□□□□□ -2.21
HMGN4O00479 AC012254.4-201ENST00000588843 273 ntBASIC1.24□□□□□ -2.21
HMGN4O00479 AC027309.3-201ENST00000623419 351 ntBASIC1.24□□□□□ -2.21
HMGN4O00479 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
HMGN4O00479 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.24□□□□□ -2.21
HMGN4O00479 AC068050.1-201ENST00000394891 380 ntBASIC1.23□□□□□ -2.21
HMGN4O00479 HMGB3P31-201ENST00000413333 595 ntBASIC1.23□□□□□ -2.21
HMGN4O00479 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.23□□□□□ -2.21
HMGN4O00479 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC1.23□□□□□ -2.21
HMGN4O00479 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.23□□□□□ -2.21
HMGN4O00479 USP12PX-201ENST00000432383 1057 ntBASIC1.23□□□□□ -2.21
HMGN4O00479 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.23□□□□□ -2.21
HMGN4O00479 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.23□□□□□ -2.21
HMGN4O00479 RPS29P29-201ENST00000456396 171 ntBASIC1.23□□□□□ -2.21
HMGN4O00479 AC055731.1-201ENST00000474387 401 ntBASIC1.23□□□□□ -2.21
HMGN4O00479 AC093801.2-201ENST00000503966 1050 ntBASIC1.23□□□□□ -2.21
HMGN4O00479 MRPS17P9-201ENST00000511924 393 ntBASIC1.23□□□□□ -2.21
HMGN4O00479 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.23□□□□□ -2.21
HMGN4O00479 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.23□□□□□ -2.21
HMGN4O00479 AP005902.1-201ENST00000521358 186 ntBASIC1.23□□□□□ -2.21
HMGN4O00479 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
HMGN4O00479 AC074029.2-201ENST00000551045 634 ntBASIC1.23□□□□□ -2.21
HMGN4O00479 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.23□□□□□ -2.21
HMGN4O00479 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.23□□□□□ -2.21
HMGN4O00479 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.23□□□□□ -2.21
HMGN4O00479 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.23□□□□□ -2.21
HMGN4O00479 DPRXP5-201ENST00000604662 539 ntBASIC1.23□□□□□ -2.21
HMGN4O00479 AL450336.1-201ENST00000605180 586 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms