Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 RNA5SP401-201ENST00000515920 127 ntBASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 MIR2114-201ENST00000516645 80 ntBASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 SNORD60.2-201ENST00000516883 86 ntBASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 AC087369.1-201ENST00000520775 996 ntBASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 AC008489.1-201ENST00000524271 483 ntBASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 HIF1AP1-201ENST00000553642 175 ntBASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 PARP1P2-201ENST00000556806 195 ntBASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 AC090877.1-201ENST00000561418 344 ntBASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 FAM60BP-201ENST00000578364 658 ntBASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 AC024619.4-201ENST00000580924 316 ntBASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 AC083809.1-201ENST00000615051 472 ntBASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 AL360181.4-201ENST00000621752 134 ntBASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 AC024614.3-201ENST00000637860 256 ntBASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 AL157700.1-201ENST00000561973 1432 ntBASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 AC092326.2-201ENST00000624772 1561 ntBASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 AC004972.1-201ENST00000623934 2209 ntBASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 RPL7P26-201ENST00000333817 754 ntBASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 SNORA72.1-201ENST00000363485 129 ntBASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 RNU6-188P-201ENST00000364207 107 ntBASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 RNU6-173P-201ENST00000364215 104 ntBASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 SNORA70.2-201ENST00000364506 135 ntBASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 RNU6-1181P-201ENST00000384191 106 ntBASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 AC009237.5-201ENST00000414271 501 ntBASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 AC079780.1-201ENST00000428259 207 ntBASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 RANP8-201ENST00000444720 713 ntBASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 AC073415.1-201ENST00000449240 153 ntBASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 AL132838.2-201ENST00000492041 314 ntBASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 MLLT10P2-201ENST00000506434 249 ntBASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 AC020593.1-201ENST00000507399 299 ntBASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 ERHP1-201ENST00000523006 310 ntBASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 AC109635.4-202ENST00000531666 412 ntBASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 BNIP3P30-201ENST00000601184 574 ntBASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 AL445567.2-201ENST00000618935 498 ntBASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHA3Q9Y5H8 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 MAPK10-372ENST00000641954 3413 ntBASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 AL139276.1-201ENST00000311910 1001 ntBASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 RNU6-179P-201ENST00000363350 107 ntBASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 SNORA7.2-201ENST00000364446 145 ntBASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 SNORA36C-201ENST00000384289 132 ntBASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 RNU6-876P-201ENST00000391295 104 ntBASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 AL136116.1-201ENST00000403591 381 ntBASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 OR9R1P-201ENST00000412200 877 ntBASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 TBCAP1-201ENST00000436520 327 ntBASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 MTND5P20-201ENST00000448677 143 ntBASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 RPL7L1P8-201ENST00000469911 741 ntBASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 AC146944.2-203ENST00000502493 354 ntBASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 AC139495.1-202ENST00000513164 354 ntBASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 NARSP2-201ENST00000518524 679 ntBASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms