Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHGC4Q9Y5F7 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHGC4Q9Y5F7 RPL9P7-201ENST00000330965 580 ntBASIC5.21□□□□□ -1.58
PCDHGC4Q9Y5F7 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDHGC4Q9Y5F7 MIR133A2-201ENST00000347538 102 ntBASIC5.21□□□□□ -1.58
PCDHGC4Q9Y5F7 Y_RNA.143-201ENST00000363520 106 ntBASIC5.21□□□□□ -1.58
PCDHGC4Q9Y5F7 AC019155.1-201ENST00000382242 574 ntBASIC5.21□□□□□ -1.58
PCDHGC4Q9Y5F7 SNORA70-201ENST00000384436 135 ntBASIC5.21□□□□□ -1.58
PCDHGC4Q9Y5F7 AC013442.1-201ENST00000397347 228 ntBASIC5.21□□□□□ -1.58
PCDHGC4Q9Y5F7 AL391219.1-201ENST00000422570 483 ntBASIC5.21□□□□□ -1.58
PCDHGC4Q9Y5F7 AL513043.1-201ENST00000439124 535 ntBASIC5.21□□□□□ -1.58
PCDHGC4Q9Y5F7 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.21□□□□□ -1.58
PCDHGC4Q9Y5F7 RPL9P9-202ENST00000466501 579 ntBASIC5.21□□□□□ -1.58
PCDHGC4Q9Y5F7 AKIRIN2P1-201ENST00000505898 352 ntBASIC5.21□□□□□ -1.58
PCDHGC4Q9Y5F7 SNORA31.3-201ENST00000516029 96 ntBASIC5.21□□□□□ -1.58
PCDHGC4Q9Y5F7 RNU6-346P-201ENST00000516288 111 ntBASIC5.21□□□□□ -1.58
PCDHGC4Q9Y5F7 RNU6-914P-201ENST00000516749 109 ntBASIC5.21□□□□□ -1.58
PCDHGC4Q9Y5F7 RN7SKP258-201ENST00000517151 304 ntBASIC5.21□□□□□ -1.58
PCDHGC4Q9Y5F7 AC027369.5-201ENST00000533838 755 ntBASIC5.21□□□□□ -1.58
PCDHGC4Q9Y5F7 SYF2P1-201ENST00000550658 413 ntBASIC5.21□□□□□ -1.58
PCDHGC4Q9Y5F7 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.21□□□□□ -1.58
PCDHGC4Q9Y5F7 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDHGC4Q9Y5F7 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDHGC4Q9Y5F7 MIR548AC-201ENST00000585049 88 ntBASIC5.21□□□□□ -1.58
PCDHGC4Q9Y5F7 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.21□□□□□ -1.58
PCDHGC4Q9Y5F7 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDHGC4Q9Y5F7 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
PCDHGC4Q9Y5F7 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
PCDHGC4Q9Y5F7 AC114947.2-201ENST00000565748 2125 ntBASIC5.21□□□□□ -1.58
PCDHGC4Q9Y5F7 MTND5P9-201ENST00000503854 1755 ntBASIC5.21□□□□□ -1.58
PCDHGC4Q9Y5F7 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
PCDHGC4Q9Y5F7 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
PCDHGC4Q9Y5F7 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHGC4Q9Y5F7 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
PCDHGC4Q9Y5F7 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHGC4Q9Y5F7 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 RNU1-106P-201ENST00000384382 164 ntBASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 MIR135A2-201ENST00000384854 100 ntBASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 MIR521-1-201ENST00000384902 87 ntBASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 RNU6-821P-201ENST00000390995 107 ntBASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 AC004866.2-201ENST00000438285 481 ntBASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 RNU6-1037P-201ENST00000459571 107 ntBASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 RPS27AP13-201ENST00000498403 237 ntBASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 HIGD1AP3-201ENST00000515857 278 ntBASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 AC091144.1-201ENST00000519573 138 ntBASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 AC007458.1-201ENST00000542812 373 ntBASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 OR4H12P-201ENST00000556269 907 ntBASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 AC018552.1-201ENST00000562099 811 ntBASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 MIR4700-201ENST00000578311 74 ntBASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 AC006116.3-201ENST00000592968 361 ntBASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 AC123912.5-201ENST00000605470 343 ntBASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 AC093799.2-201ENST00000610062 578 ntBASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 RPSAP73-201ENST00000614820 330 ntBASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 AL450472.3-201ENST00000615578 367 ntBASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 U2.14-201ENST00000615943 113 ntBASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 AC018445.2-201ENST00000622987 260 ntBASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 AC010329.2-201ENST00000595195 2737 ntBASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDHGC4Q9Y5F7 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHGC4Q9Y5F7 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHGC4Q9Y5F7 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHGC4Q9Y5F7 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHGC4Q9Y5F7 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHGC4Q9Y5F7 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHGC4Q9Y5F7 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHGC4Q9Y5F7 SCARNA15-201ENST00000607520 4325 ntBASIC5.19□□□□□ -1.58
PCDHGC4Q9Y5F7 Y_RNA.76-201ENST00000362931 109 ntBASIC5.19□□□□□ -1.58
PCDHGC4Q9Y5F7 U3.13-201ENST00000364804 214 ntBASIC5.19□□□□□ -1.58
PCDHGC4Q9Y5F7 CYB5AP4-201ENST00000396692 399 ntBASIC5.19□□□□□ -1.58
PCDHGC4Q9Y5F7 AC079809.1-201ENST00000415468 276 ntBASIC5.19□□□□□ -1.58
PCDHGC4Q9Y5F7 AC063979.1-201ENST00000415539 377 ntBASIC5.19□□□□□ -1.58
PCDHGC4Q9Y5F7 EI24P1-201ENST00000416584 867 ntBASIC5.19□□□□□ -1.58
PCDHGC4Q9Y5F7 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC5.19□□□□□ -1.58
PCDHGC4Q9Y5F7 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.19□□□□□ -1.58
PCDHGC4Q9Y5F7 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC5.19□□□□□ -1.58
PCDHGC4Q9Y5F7 VTI1BP4-201ENST00000427516 527 ntBASIC5.19□□□□□ -1.58
PCDHGC4Q9Y5F7 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC5.19□□□□□ -1.58
PCDHGC4Q9Y5F7 PRDX3P3-201ENST00000447765 522 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms