Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 AC090877.1-201ENST00000561418 344 ntBASIC4.41□□□□□ -1.7
USP25Q9UHP3 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.41□□□□□ -1.7
USP25Q9UHP3 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.41□□□□□ -1.7
USP25Q9UHP3 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.41□□□□□ -1.7
USP25Q9UHP3 Y_RNA.804-201ENST00000615262 101 ntBASIC4.41□□□□□ -1.7
USP25Q9UHP3 AC243312.2-201ENST00000623340 601 ntBASIC4.41□□□□□ -1.7
USP25Q9UHP3 AC009033.1-201ENST00000624279 431 ntBASIC4.41□□□□□ -1.7
USP25Q9UHP3 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USP25Q9UHP3 AL133383.2-201ENST00000622958 2336 ntBASIC4.41□□□□□ -1.7
USP25Q9UHP3 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USP25Q9UHP3 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USP25Q9UHP3 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
USP25Q9UHP3 PRO1804-201ENST00000623780 2050 ntBASIC4.41□□□□□ -1.7
USP25Q9UHP3 GABPAP-201ENST00000419271 1356 ntBASIC4.4□□□□□ -1.7
USP25Q9UHP3 CEP170P1-201ENST00000502249 4587 ntBASIC4.4□□□□□ -1.7
USP25Q9UHP3 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
USP25Q9UHP3 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.4□□□□□ -1.7
USP25Q9UHP3 AC009812.4-201ENST00000569134 1805 ntBASIC4.4□□□□□ -1.7
USP25Q9UHP3 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
USP25Q9UHP3 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
USP25Q9UHP3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.4□□□□□ -1.71
USP25Q9UHP3 RNA5SP129-201ENST00000410276 118 ntBASIC4.4□□□□□ -1.71
USP25Q9UHP3 AC127391.1-201ENST00000411737 98 ntBASIC4.4□□□□□ -1.71
USP25Q9UHP3 SNRPEP10-201ENST00000420249 274 ntBASIC4.4□□□□□ -1.71
USP25Q9UHP3 AL353193.1-201ENST00000421444 268 ntBASIC4.4□□□□□ -1.71
USP25Q9UHP3 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.4□□□□□ -1.71
USP25Q9UHP3 RSL24D1P6-201ENST00000426934 401 ntBASIC4.4□□□□□ -1.71
USP25Q9UHP3 AC090774.1-201ENST00000435925 246 ntBASIC4.4□□□□□ -1.71
USP25Q9UHP3 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.4□□□□□ -1.71
USP25Q9UHP3 RANP8-201ENST00000444720 713 ntBASIC4.4□□□□□ -1.71
USP25Q9UHP3 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.4□□□□□ -1.71
USP25Q9UHP3 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.4□□□□□ -1.71
USP25Q9UHP3 AMD1P1-201ENST00000457220 922 ntBASIC4.4□□□□□ -1.71
USP25Q9UHP3 RPS4XP13-201ENST00000483219 789 ntBASIC4.4□□□□□ -1.71
USP25Q9UHP3 RPS3AP50-201ENST00000487064 803 ntBASIC4.4□□□□□ -1.71
USP25Q9UHP3 TRBV12-2-201ENST00000489763 344 ntBASIC4.4□□□□□ -1.71
USP25Q9UHP3 AC091951.2-201ENST00000500762 203 ntBASIC4.4□□□□□ -1.71
USP25Q9UHP3 AC008628.2-201ENST00000502605 298 ntBASIC4.4□□□□□ -1.71
USP25Q9UHP3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.4□□□□□ -1.71
USP25Q9UHP3 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.4□□□□□ -1.71
USP25Q9UHP3 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.4□□□□□ -1.71
USP25Q9UHP3 NPM1P41-201ENST00000512920 831 ntBASIC4.4□□□□□ -1.71
USP25Q9UHP3 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.4□□□□□ -1.71
USP25Q9UHP3 RNU6-1281P-201ENST00000516223 105 ntBASIC4.4□□□□□ -1.71
USP25Q9UHP3 RN7SKP289-201ENST00000517244 295 ntBASIC4.4□□□□□ -1.71
USP25Q9UHP3 RNA5SP179-201ENST00000517284 121 ntBASIC4.4□□□□□ -1.71
USP25Q9UHP3 IGKV2D-19-201ENST00000523346 262 ntBASIC4.4□□□□□ -1.71
USP25Q9UHP3 AL133271.1-201ENST00000538229 291 ntBASIC4.4□□□□□ -1.71
USP25Q9UHP3 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.4□□□□□ -1.71
USP25Q9UHP3 UBE2V2P2-201ENST00000587677 504 ntBASIC4.4□□□□□ -1.71
USP25Q9UHP3 AL117336.2-201ENST00000602435 335 ntBASIC4.4□□□□□ -1.71
USP25Q9UHP3 AL020997.2-201ENST00000602607 184 ntBASIC4.4□□□□□ -1.71
USP25Q9UHP3 AC007621.1-201ENST00000604544 437 ntBASIC4.4□□□□□ -1.71
USP25Q9UHP3 AL353621.2-201ENST00000605340 133 ntBASIC4.4□□□□□ -1.71
USP25Q9UHP3 AC121334.2-201ENST00000605387 271 ntBASIC4.4□□□□□ -1.71
USP25Q9UHP3 ARF4P1-201ENST00000605447 541 ntBASIC4.4□□□□□ -1.71
USP25Q9UHP3 AC103710.3-201ENST00000608157 948 ntBASIC4.4□□□□□ -1.71
USP25Q9UHP3 AL133173.2-201ENST00000614270 90 ntBASIC4.4□□□□□ -1.71
USP25Q9UHP3 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.4□□□□□ -1.71
USP25Q9UHP3 FER-210ENST00000628534 558 ntTSL 5 BASIC4.4□□□□□ -1.71
USP25Q9UHP3 MIR4275-201ENST00000636486 87 ntBASIC4.4□□□□□ -1.71
USP25Q9UHP3 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.4□□□□□ -1.71
USP25Q9UHP3 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
USP25Q9UHP3 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.4□□□□□ -1.71
USP25Q9UHP3 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
USP25Q9UHP3 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
USP25Q9UHP3 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.39□□□□□ -1.71
USP25Q9UHP3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
USP25Q9UHP3 Y_RNA.61-201ENST00000362835 102 ntBASIC4.39□□□□□ -1.71
USP25Q9UHP3 RNU6-1322P-201ENST00000364309 107 ntBASIC4.39□□□□□ -1.71
USP25Q9UHP3 MIR199A2-201ENST00000385289 110 ntBASIC4.39□□□□□ -1.71
USP25Q9UHP3 RNU6-908P-201ENST00000410160 94 ntBASIC4.39□□□□□ -1.71
USP25Q9UHP3 OR51A5P-201ENST00000415429 942 ntBASIC4.39□□□□□ -1.71
USP25Q9UHP3 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.39□□□□□ -1.71
USP25Q9UHP3 AC024082.2-201ENST00000434771 238 ntBASIC4.39□□□□□ -1.71
USP25Q9UHP3 HMGB1P12-201ENST00000438594 598 ntBASIC4.39□□□□□ -1.71
USP25Q9UHP3 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.39□□□□□ -1.71
USP25Q9UHP3 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.39□□□□□ -1.71
USP25Q9UHP3 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.39□□□□□ -1.71
USP25Q9UHP3 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.39□□□□□ -1.71
USP25Q9UHP3 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.39□□□□□ -1.71
USP25Q9UHP3 RPL36AP51-201ENST00000487216 318 ntBASIC4.39□□□□□ -1.71
USP25Q9UHP3 AC055855.1-201ENST00000489563 579 ntBASIC4.39□□□□□ -1.71
USP25Q9UHP3 AC079382.1-201ENST00000493346 557 ntBASIC4.39□□□□□ -1.71
USP25Q9UHP3 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
USP25Q9UHP3 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.39□□□□□ -1.71
USP25Q9UHP3 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.39□□□□□ -1.71
USP25Q9UHP3 RNA5SP468-201ENST00000516782 93 ntBASIC4.39□□□□□ -1.71
USP25Q9UHP3 AF235103.2-201ENST00000525753 346 ntBASIC4.39□□□□□ -1.71
USP25Q9UHP3 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.39□□□□□ -1.71
USP25Q9UHP3 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.39□□□□□ -1.71
USP25Q9UHP3 AC125611.2-201ENST00000551907 647 ntBASIC4.39□□□□□ -1.71
USP25Q9UHP3 OR4T1P-201ENST00000554933 911 ntBASIC4.39□□□□□ -1.71
USP25Q9UHP3 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.39□□□□□ -1.71
USP25Q9UHP3 SUB1P2-201ENST00000556401 297 ntBASIC4.39□□□□□ -1.71
USP25Q9UHP3 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.39□□□□□ -1.71
USP25Q9UHP3 COX6CP3-201ENST00000580869 223 ntBASIC4.39□□□□□ -1.71
USP25Q9UHP3 MIR3118-1-201ENST00000581787 76 ntBASIC4.39□□□□□ -1.71
USP25Q9UHP3 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.39□□□□□ -1.71
USP25Q9UHP3 NRBF2P5-201ENST00000603087 788 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms