Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 AL670379.11-201ENST00000604059 253 ntBASIC5.18□□□□□ -1.58
USP35Q9P2H5 AC008162.1-201ENST00000604718 254 ntBASIC5.18□□□□□ -1.58
USP35Q9P2H5 AL670379.1-201ENST00000604752 252 ntBASIC5.18□□□□□ -1.58
USP35Q9P2H5 AL670379.5-201ENST00000605253 252 ntBASIC5.18□□□□□ -1.58
USP35Q9P2H5 AL670379.12-201ENST00000605291 253 ntBASIC5.18□□□□□ -1.58
USP35Q9P2H5 AL670379.8-201ENST00000605353 252 ntBASIC5.18□□□□□ -1.58
USP35Q9P2H5 AL670379.7-201ENST00000605823 252 ntBASIC5.18□□□□□ -1.58
USP35Q9P2H5 AC128687.2-201ENST00000609657 566 ntBASIC5.18□□□□□ -1.58
USP35Q9P2H5 AC091834.1-201ENST00000614543 472 ntBASIC5.18□□□□□ -1.58
USP35Q9P2H5 MIR7702-201ENST00000621931 59 ntBASIC5.18□□□□□ -1.58
USP35Q9P2H5 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.18□□□□□ -1.58
USP35Q9P2H5 AL392088.2-201ENST00000637607 285 ntBASIC5.18□□□□□ -1.58
USP35Q9P2H5 AC119674.1-207ENST00000641355 633 ntBASIC5.18□□□□□ -1.58
USP35Q9P2H5 OR4G2P-202ENST00000641004 1759 ntBASIC5.18□□□□□ -1.58
USP35Q9P2H5 AC066616.2-201ENST00000559334 1481 ntBASIC5.18□□□□□ -1.58
USP35Q9P2H5 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
USP35Q9P2H5 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC5.18□□□□□ -1.58
USP35Q9P2H5 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC5.18□□□□□ -1.58
USP35Q9P2H5 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
USP35Q9P2H5 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
USP35Q9P2H5 ANKRD26P2-201ENST00000445530 1710 ntBASIC5.17□□□□□ -1.58
USP35Q9P2H5 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
USP35Q9P2H5 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
USP35Q9P2H5 RNA5SP267-201ENST00000364893 126 ntBASIC5.17□□□□□ -1.58
USP35Q9P2H5 SNORA20.2-201ENST00000383922 131 ntBASIC5.17□□□□□ -1.58
USP35Q9P2H5 MIR128-1-201ENST00000384921 82 ntBASIC5.17□□□□□ -1.58
USP35Q9P2H5 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
USP35Q9P2H5 ZNF90P2-204ENST00000419323 1075 ntBASIC5.17□□□□□ -1.58
USP35Q9P2H5 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC5.17□□□□□ -1.58
USP35Q9P2H5 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC5.17□□□□□ -1.58
USP35Q9P2H5 AC082651.2-201ENST00000496833 166 ntBASIC5.17□□□□□ -1.58
USP35Q9P2H5 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.17□□□□□ -1.58
USP35Q9P2H5 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC5.17□□□□□ -1.58
USP35Q9P2H5 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC5.17□□□□□ -1.58
USP35Q9P2H5 AC007458.1-201ENST00000542812 373 ntBASIC5.17□□□□□ -1.58
USP35Q9P2H5 AC087883.1-201ENST00000551882 391 ntBASIC5.17□□□□□ -1.58
USP35Q9P2H5 AGGF1P4-201ENST00000568249 801 ntBASIC5.17□□□□□ -1.58
USP35Q9P2H5 MIR3913-1-201ENST00000577744 102 ntBASIC5.17□□□□□ -1.58
USP35Q9P2H5 AC064801.1-201ENST00000612025 407 ntBASIC5.17□□□□□ -1.58
USP35Q9P2H5 AL390240.1-201ENST00000612950 384 ntBASIC5.17□□□□□ -1.58
USP35Q9P2H5 AC099842.1-201ENST00000619919 596 ntBASIC5.17□□□□□ -1.58
USP35Q9P2H5 AL732618.1-201ENST00000623251 301 ntBASIC5.17□□□□□ -1.58
USP35Q9P2H5 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
USP35Q9P2H5 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
USP35Q9P2H5 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
USP35Q9P2H5 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
USP35Q9P2H5 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
USP35Q9P2H5 SYF2-202ENST00000354361 926 ntTSL 2 BASIC5.16□□□□□ -1.58
USP35Q9P2H5 RNA5SP295-201ENST00000362655 121 ntBASIC5.16□□□□□ -1.58
USP35Q9P2H5 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
USP35Q9P2H5 Y_RNA.582-201ENST00000391023 95 ntBASIC5.16□□□□□ -1.58
USP35Q9P2H5 RN7SKP53-201ENST00000411337 315 ntBASIC5.16□□□□□ -1.58
USP35Q9P2H5 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC5.16□□□□□ -1.58
USP35Q9P2H5 MTCO3P41-201ENST00000414801 328 ntBASIC5.16□□□□□ -1.58
USP35Q9P2H5 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
USP35Q9P2H5 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.16□□□□□ -1.58
USP35Q9P2H5 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC5.16□□□□□ -1.58
USP35Q9P2H5 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC5.16□□□□□ -1.58
USP35Q9P2H5 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC5.16□□□□□ -1.58
USP35Q9P2H5 TAAR7P-201ENST00000436141 242 ntBASIC5.16□□□□□ -1.58
USP35Q9P2H5 NDUFB4P6-201ENST00000436819 366 ntBASIC5.16□□□□□ -1.58
USP35Q9P2H5 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.16□□□□□ -1.58
USP35Q9P2H5 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC5.16□□□□□ -1.58
USP35Q9P2H5 RPL21P11-201ENST00000461458 483 ntBASIC5.16□□□□□ -1.58
USP35Q9P2H5 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC5.16□□□□□ -1.58
USP35Q9P2H5 RN7SKP258-201ENST00000517151 304 ntBASIC5.16□□□□□ -1.58
USP35Q9P2H5 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC5.16□□□□□ -1.58
USP35Q9P2H5 AC022616.3-201ENST00000523940 148 ntBASIC5.16□□□□□ -1.58
USP35Q9P2H5 AC004024.1-201ENST00000549244 247 ntBASIC5.16□□□□□ -1.58
USP35Q9P2H5 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.16□□□□□ -1.58
USP35Q9P2H5 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC5.16□□□□□ -1.58
USP35Q9P2H5 MIR3167-201ENST00000579623 85 ntBASIC5.16□□□□□ -1.58
USP35Q9P2H5 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC5.16□□□□□ -1.58
USP35Q9P2H5 AC073648.5-201ENST00000603502 305 ntBASIC5.16□□□□□ -1.58
USP35Q9P2H5 AL161729.4-201ENST00000604650 476 ntBASIC5.16□□□□□ -1.58
USP35Q9P2H5 AL161734.1-201ENST00000609720 557 ntBASIC5.16□□□□□ -1.58
USP35Q9P2H5 AC008498.1-201ENST00000613012 531 ntBASIC5.16□□□□□ -1.58
USP35Q9P2H5 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC5.16□□□□□ -1.58
USP35Q9P2H5 AP001148.1-201ENST00000624124 2359 ntBASIC5.16□□□□□ -1.58
USP35Q9P2H5 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC5.16□□□□□ -1.58
USP35Q9P2H5 CR848007.1-201ENST00000442354 1699 ntBASIC5.15□□□□□ -1.58
USP35Q9P2H5 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC5.15□□□□□ -1.58
USP35Q9P2H5 MAPK10-373ENST00000641983 6772 ntBASIC5.15□□□□□ -1.58
USP35Q9P2H5 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
USP35Q9P2H5 RNU1-18P-201ENST00000363062 164 ntBASIC5.15□□□□□ -1.59
USP35Q9P2H5 SNORD56.2-201ENST00000363242 71 ntBASIC5.15□□□□□ -1.59
USP35Q9P2H5 SNORD6-201ENST00000365444 73 ntBASIC5.15□□□□□ -1.59
USP35Q9P2H5 HMGN2P8-201ENST00000391458 268 ntBASIC5.15□□□□□ -1.59
USP35Q9P2H5 BX842559.1-201ENST00000419615 532 ntBASIC5.15□□□□□ -1.59
USP35Q9P2H5 AL158156.1-201ENST00000422509 473 ntBASIC5.15□□□□□ -1.59
USP35Q9P2H5 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC5.15□□□□□ -1.59
USP35Q9P2H5 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC5.15□□□□□ -1.59
USP35Q9P2H5 Z74696.2-201ENST00000436514 498 ntBASIC5.15□□□□□ -1.59
USP35Q9P2H5 AC009237.8-201ENST00000445492 379 ntBASIC5.15□□□□□ -1.59
USP35Q9P2H5 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC5.15□□□□□ -1.59
USP35Q9P2H5 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC5.15□□□□□ -1.59
USP35Q9P2H5 AL049873.1-201ENST00000480540 376 ntBASIC5.15□□□□□ -1.59
USP35Q9P2H5 RN7SL432P-201ENST00000484057 298 ntBASIC5.15□□□□□ -1.59
USP35Q9P2H5 RPL30P5-201ENST00000494923 336 ntBASIC5.15□□□□□ -1.59
USP35Q9P2H5 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms