Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 NDUFS5P1-201ENST00000405668 289 ntBASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 AP000567.1-201ENST00000406413 156 ntBASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 RPL30P2-201ENST00000414021 291 ntBASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 BX842559.1-201ENST00000419615 532 ntBASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 AL451054.2-201ENST00000420896 202 ntBASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 PIGFP2-201ENST00000421400 651 ntBASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 RAC1P6-201ENST00000423911 575 ntBASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 AC093106.2-201ENST00000428212 385 ntBASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 GOT2P5-201ENST00000433995 546 ntBASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 AC092573.2-201ENST00000434546 243 ntBASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 RPS24P1-201ENST00000438550 371 ntBASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 AL133547.1-201ENST00000448546 220 ntBASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 SNORD97-201ENST00000459187 142 ntBASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 RPS3AP17-201ENST00000472594 777 ntBASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 AL358832.1-201ENST00000497800 389 ntBASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 NRON-201ENST00000517270 370 ntBASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 MTCO2P4-201ENST00000517968 247 ntBASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 HMGB1P41-201ENST00000520234 440 ntBASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 SUMO2P20-201ENST00000520803 283 ntBASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 RPL21P12-201ENST00000559810 515 ntBASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 MIR5187-201ENST00000583479 76 ntBASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 AC068790.2-201ENST00000602601 557 ntBASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 AL136363.1-201ENST00000605349 337 ntBASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 NDUFA8P1-201ENST00000605525 367 ntBASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 BRDTP1-201ENST00000605735 677 ntBASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 AL589994.2-201ENST00000621124 579 ntBASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 AC244100.1-202ENST00000621554 382 ntBASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 RNU6-39P-201ENST00000384344 107 ntBASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 RNU2-66P-201ENST00000410650 161 ntBASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 RAB9AP3-201ENST00000412737 573 ntBASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 AL035423.1-201ENST00000420331 213 ntBASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 AC245054.1-201ENST00000420944 258 ntBASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 NDUFB4P7-201ENST00000423198 363 ntBASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 AC079448.1-201ENST00000449377 373 ntBASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 RAB9AP1-201ENST00000449393 573 ntBASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 RNA5SP310-201ENST00000459084 116 ntBASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 RNU6-1231P-201ENST00000517185 103 ntBASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 AC009063.1-201ENST00000563342 702 ntBASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 AC090132.2-201ENST00000615881 347 ntBASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 AC006133.1-201ENST00000617106 264 ntBASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 AC119674.1-207ENST00000641355 633 ntBASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
HCN3Q9P1Z3 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 Y_RNA.296-201ENST00000364930 108 ntBASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 RNU5E-6P-201ENST00000365574 115 ntBASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 MIR200C-201ENST00000384980 68 ntBASIC3.5□□□□□ -1.85
HCN3Q9P1Z3 RNU6-1197P-201ENST00000391183 107 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms