Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CLN6Q9NWW5 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CLN6Q9NWW5 RNU6-1207P-201ENST00000384343 107 ntBASIC2.29□□□□□ -2.04
CLN6Q9NWW5 RNU6-1257P-201ENST00000384625 110 ntBASIC2.29□□□□□ -2.04
CLN6Q9NWW5 AL513475.1-201ENST00000406602 315 ntBASIC2.29□□□□□ -2.04
CLN6Q9NWW5 RNA5SP80-201ENST00000410475 111 ntBASIC2.29□□□□□ -2.04
CLN6Q9NWW5 AL592148.1-201ENST00000413568 445 ntBASIC2.29□□□□□ -2.04
CLN6Q9NWW5 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.29□□□□□ -2.04
CLN6Q9NWW5 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.29□□□□□ -2.04
CLN6Q9NWW5 RPL23AP76-201ENST00000441860 458 ntBASIC2.29□□□□□ -2.04
CLN6Q9NWW5 AL513328.1-201ENST00000446460 224 ntBASIC2.29□□□□□ -2.04
CLN6Q9NWW5 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.29□□□□□ -2.04
CLN6Q9NWW5 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CLN6Q9NWW5 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CLN6Q9NWW5 SUMO2P6-201ENST00000505273 288 ntBASIC2.29□□□□□ -2.04
CLN6Q9NWW5 AC026427.2-201ENST00000506228 536 ntBASIC2.29□□□□□ -2.04
CLN6Q9NWW5 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.29□□□□□ -2.04
CLN6Q9NWW5 RNU6-150P-201ENST00000516237 95 ntBASIC2.29□□□□□ -2.04
CLN6Q9NWW5 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.29□□□□□ -2.04
CLN6Q9NWW5 AC022080.3-201ENST00000544433 482 ntBASIC2.29□□□□□ -2.04
CLN6Q9NWW5 GLYCAM1-201ENST00000546596 285 ntBASIC2.29□□□□□ -2.04
CLN6Q9NWW5 AC087465.1-201ENST00000560574 245 ntBASIC2.29□□□□□ -2.04
CLN6Q9NWW5 MIR4429-201ENST00000580105 73 ntBASIC2.29□□□□□ -2.04
CLN6Q9NWW5 MIR5194-201ENST00000582634 120 ntBASIC2.29□□□□□ -2.04
CLN6Q9NWW5 SRGNP1-201ENST00000603392 451 ntBASIC2.29□□□□□ -2.04
CLN6Q9NWW5 AL645944.1-201ENST00000603857 493 ntBASIC2.29□□□□□ -2.04
CLN6Q9NWW5 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.29□□□□□ -2.04
CLN6Q9NWW5 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.28□□□□□ -2.04
CLN6Q9NWW5 SNORA68.1-201ENST00000364537 132 ntBASIC2.28□□□□□ -2.04
CLN6Q9NWW5 SNORA23-201ENST00000365128 182 ntBASIC2.28□□□□□ -2.04
CLN6Q9NWW5 RNU6-217P-201ENST00000384164 104 ntBASIC2.28□□□□□ -2.04
CLN6Q9NWW5 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.28□□□□□ -2.04
CLN6Q9NWW5 AL449283.1-202ENST00000418249 604 ntBASIC2.28□□□□□ -2.04
CLN6Q9NWW5 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.28□□□□□ -2.04
CLN6Q9NWW5 AC092047.1-201ENST00000424997 240 ntBASIC2.28□□□□□ -2.04
CLN6Q9NWW5 AC098614.2-201ENST00000426040 255 ntBASIC2.28□□□□□ -2.04
CLN6Q9NWW5 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.28□□□□□ -2.04
CLN6Q9NWW5 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.28□□□□□ -2.04
CLN6Q9NWW5 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.28□□□□□ -2.04
CLN6Q9NWW5 AL135938.1-201ENST00000443141 297 ntBASIC2.28□□□□□ -2.04
CLN6Q9NWW5 RPL21P133-201ENST00000443666 476 ntBASIC2.28□□□□□ -2.04
CLN6Q9NWW5 MTCO2P25-201ENST00000447065 681 ntBASIC2.28□□□□□ -2.04
CLN6Q9NWW5 RSL24D1P3-201ENST00000449255 495 ntBASIC2.28□□□□□ -2.04
CLN6Q9NWW5 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.28□□□□□ -2.04
CLN6Q9NWW5 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.28□□□□□ -2.04
CLN6Q9NWW5 AC021382.1-201ENST00000483523 359 ntBASIC2.28□□□□□ -2.04
CLN6Q9NWW5 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.28□□□□□ -2.04
CLN6Q9NWW5 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.28□□□□□ -2.04
CLN6Q9NWW5 COX6CP8-201ENST00000522620 226 ntBASIC2.28□□□□□ -2.04
CLN6Q9NWW5 SUB1P1-201ENST00000524415 382 ntBASIC2.28□□□□□ -2.04
CLN6Q9NWW5 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.28□□□□□ -2.04
CLN6Q9NWW5 AC087241.2-201ENST00000535801 324 ntBASIC2.28□□□□□ -2.04
CLN6Q9NWW5 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.28□□□□□ -2.04
CLN6Q9NWW5 AL391261.3-201ENST00000557194 520 ntBASIC2.28□□□□□ -2.04
CLN6Q9NWW5 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.28□□□□□ -2.04
CLN6Q9NWW5 AC009163.5-201ENST00000575421 637 ntBASIC2.28□□□□□ -2.04
CLN6Q9NWW5 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.28□□□□□ -2.04
CLN6Q9NWW5 MIR4325-201ENST00000583049 90 ntBASIC2.28□□□□□ -2.04
CLN6Q9NWW5 AC011471.1-201ENST00000585766 187 ntBASIC2.28□□□□□ -2.04
CLN6Q9NWW5 AL353997.4-201ENST00000586196 166 ntBASIC2.28□□□□□ -2.04
CLN6Q9NWW5 NRBF2P5-201ENST00000603087 788 ntBASIC2.28□□□□□ -2.04
CLN6Q9NWW5 AL161729.4-201ENST00000604650 476 ntBASIC2.28□□□□□ -2.04
CLN6Q9NWW5 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.28□□□□□ -2.04
CLN6Q9NWW5 AC093732.2-201ENST00000607950 274 ntBASIC2.28□□□□□ -2.04
CLN6Q9NWW5 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.28□□□□□ -2.04
CLN6Q9NWW5 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.28□□□□□ -2.04
CLN6Q9NWW5 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.28□□□□□ -2.04
CLN6Q9NWW5 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.28□□□□□ -2.04
CLN6Q9NWW5 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CLN6Q9NWW5 CCT4P2-201ENST00000233836 1548 ntBASIC2.27□□□□□ -2.05
CLN6Q9NWW5 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.27□□□□□ -2.05
CLN6Q9NWW5 AL390862.1-201ENST00000635467 1469 ntBASIC2.27□□□□□ -2.05
CLN6Q9NWW5 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.27□□□□□ -2.05
CLN6Q9NWW5 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CLN6Q9NWW5 DDX10P1-201ENST00000448545 1933 ntBASIC2.27□□□□□ -2.05
CLN6Q9NWW5 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
CLN6Q9NWW5 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CLN6Q9NWW5 RNU1-39P-201ENST00000383897 165 ntBASIC2.27□□□□□ -2.05
CLN6Q9NWW5 TAS2R15P-201ENST00000390674 928 ntBASIC2.27□□□□□ -2.05
CLN6Q9NWW5 AL356057.3-201ENST00000402607 340 ntBASIC2.27□□□□□ -2.05
CLN6Q9NWW5 AL122016.1-201ENST00000403365 367 ntBASIC2.27□□□□□ -2.05
CLN6Q9NWW5 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CLN6Q9NWW5 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.27□□□□□ -2.05
CLN6Q9NWW5 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.27□□□□□ -2.05
CLN6Q9NWW5 AC091390.3-201ENST00000426478 338 ntBASIC2.27□□□□□ -2.05
CLN6Q9NWW5 ZNF863P-201ENST00000426746 417 ntBASIC2.27□□□□□ -2.05
CLN6Q9NWW5 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.27□□□□□ -2.05
CLN6Q9NWW5 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC2.27□□□□□ -2.05
CLN6Q9NWW5 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.27□□□□□ -2.05
CLN6Q9NWW5 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC2.27□□□□□ -2.05
CLN6Q9NWW5 MTND5P14-201ENST00000441481 1267 ntBASIC2.27□□□□□ -2.05
CLN6Q9NWW5 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.27□□□□□ -2.05
CLN6Q9NWW5 RPL7P49-201ENST00000471402 708 ntBASIC2.27□□□□□ -2.05
CLN6Q9NWW5 AP000852.1-201ENST00000472460 573 ntBASIC2.27□□□□□ -2.05
CLN6Q9NWW5 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.27□□□□□ -2.05
CLN6Q9NWW5 AC114786.4-201ENST00000508771 728 ntBASIC2.27□□□□□ -2.05
CLN6Q9NWW5 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.27□□□□□ -2.05
CLN6Q9NWW5 AC008837.2-201ENST00000513076 418 ntBASIC2.27□□□□□ -2.05
CLN6Q9NWW5 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.27□□□□□ -2.05
CLN6Q9NWW5 AC114797.1-201ENST00000514003 728 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms