Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 AC027673.1-201ENST00000456245 405 ntBASIC2.48□□□□□ -2.01
CTPS2Q9NRF8 snoU13.8-201ENST00000458890 104 ntBASIC2.48□□□□□ -2.01
CTPS2Q9NRF8 AC090525.1-201ENST00000479116 478 ntBASIC2.48□□□□□ -2.01
CTPS2Q9NRF8 FAM172BP-201ENST00000487497 1089 ntBASIC2.48□□□□□ -2.01
CTPS2Q9NRF8 HMGB1P36-201ENST00000487709 576 ntBASIC2.48□□□□□ -2.01
CTPS2Q9NRF8 GTF2IP9-201ENST00000502460 301 ntBASIC2.48□□□□□ -2.01
CTPS2Q9NRF8 RPL37P25-201ENST00000507308 276 ntBASIC2.48□□□□□ -2.01
CTPS2Q9NRF8 RAC1P5-201ENST00000512182 576 ntBASIC2.48□□□□□ -2.01
CTPS2Q9NRF8 RNU6-528P-201ENST00000516926 100 ntBASIC2.48□□□□□ -2.01
CTPS2Q9NRF8 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
CTPS2Q9NRF8 COX6CP8-201ENST00000522620 226 ntBASIC2.48□□□□□ -2.01
CTPS2Q9NRF8 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.48□□□□□ -2.01
CTPS2Q9NRF8 AC079600.2-201ENST00000550076 130 ntBASIC2.48□□□□□ -2.01
CTPS2Q9NRF8 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.48□□□□□ -2.01
CTPS2Q9NRF8 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.48□□□□□ -2.01
CTPS2Q9NRF8 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.48□□□□□ -2.01
CTPS2Q9NRF8 AC009712.1-201ENST00000564938 316 ntBASIC2.48□□□□□ -2.01
CTPS2Q9NRF8 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.48□□□□□ -2.01
CTPS2Q9NRF8 AC009163.5-201ENST00000575421 637 ntBASIC2.48□□□□□ -2.01
CTPS2Q9NRF8 AC022662.1-201ENST00000580252 331 ntBASIC2.48□□□□□ -2.01
CTPS2Q9NRF8 AC008277.2-201ENST00000605196 797 ntBASIC2.48□□□□□ -2.01
CTPS2Q9NRF8 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.48□□□□□ -2.01
CTPS2Q9NRF8 AC135507.2-201ENST00000612443 309 ntBASIC2.48□□□□□ -2.01
CTPS2Q9NRF8 AC022960.3-201ENST00000619794 441 ntBASIC2.48□□□□□ -2.01
CTPS2Q9NRF8 AC013470.4-201ENST00000619978 986 ntBASIC2.48□□□□□ -2.01
CTPS2Q9NRF8 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.48□□□□□ -2.01
CTPS2Q9NRF8 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.48□□□□□ -2.01
CTPS2Q9NRF8 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CTPS2Q9NRF8 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.48□□□□□ -2.01
CTPS2Q9NRF8 AP000776.1-201ENST00000530032 1663 ntBASIC2.47□□□□□ -2.01
CTPS2Q9NRF8 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.47□□□□□ -2.01
CTPS2Q9NRF8 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CTPS2Q9NRF8 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.47□□□□□ -2.01
CTPS2Q9NRF8 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CTPS2Q9NRF8 USP9YP33-201ENST00000412220 421 ntBASIC2.47□□□□□ -2.01
CTPS2Q9NRF8 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.47□□□□□ -2.01
CTPS2Q9NRF8 CCDC58P2-201ENST00000417131 366 ntBASIC2.47□□□□□ -2.01
CTPS2Q9NRF8 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.47□□□□□ -2.01
CTPS2Q9NRF8 SUMO1P4-201ENST00000429430 302 ntBASIC2.47□□□□□ -2.01
CTPS2Q9NRF8 USP9YP35-201ENST00000435696 412 ntBASIC2.47□□□□□ -2.01
CTPS2Q9NRF8 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.47□□□□□ -2.01
CTPS2Q9NRF8 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.47□□□□□ -2.01
CTPS2Q9NRF8 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.47□□□□□ -2.01
CTPS2Q9NRF8 CACYBPP2-201ENST00000453625 678 ntBASIC2.47□□□□□ -2.01
CTPS2Q9NRF8 AP000705.1-201ENST00000454567 350 ntBASIC2.47□□□□□ -2.01
CTPS2Q9NRF8 RPL30P9-201ENST00000465586 330 ntBASIC2.47□□□□□ -2.01
CTPS2Q9NRF8 TPT1P8-201ENST00000510120 555 ntBASIC2.47□□□□□ -2.01
CTPS2Q9NRF8 RNA5SP367-201ENST00000516557 118 ntBASIC2.47□□□□□ -2.01
CTPS2Q9NRF8 RNU6-714P-201ENST00000516963 103 ntBASIC2.47□□□□□ -2.01
CTPS2Q9NRF8 AC025881.1-201ENST00000518851 512 ntBASIC2.47□□□□□ -2.01
CTPS2Q9NRF8 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CTPS2Q9NRF8 AC007954.1-201ENST00000554198 494 ntBASIC2.47□□□□□ -2.01
CTPS2Q9NRF8 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.47□□□□□ -2.01
CTPS2Q9NRF8 HMGB1P14-201ENST00000557424 591 ntBASIC2.47□□□□□ -2.01
CTPS2Q9NRF8 ACTR3BP3-201ENST00000565577 979 ntBASIC2.47□□□□□ -2.01
CTPS2Q9NRF8 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.47□□□□□ -2.01
CTPS2Q9NRF8 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.47□□□□□ -2.01
CTPS2Q9NRF8 BNIP3P40-201ENST00000596017 556 ntBASIC2.47□□□□□ -2.01
CTPS2Q9NRF8 RPL23AP78-201ENST00000599928 470 ntBASIC2.47□□□□□ -2.01
CTPS2Q9NRF8 U73023.1-201ENST00000603134 700 ntBASIC2.47□□□□□ -2.01
CTPS2Q9NRF8 AC004987.4-201ENST00000603383 338 ntBASIC2.47□□□□□ -2.01
CTPS2Q9NRF8 AC024560.3-201ENST00000608482 349 ntBASIC2.47□□□□□ -2.01
CTPS2Q9NRF8 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CTPS2Q9NRF8 AL450472.3-201ENST00000615578 367 ntBASIC2.47□□□□□ -2.01
CTPS2Q9NRF8 AL391262.2-201ENST00000622466 494 ntBASIC2.47□□□□□ -2.01
CTPS2Q9NRF8 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.47□□□□□ -2.01
CTPS2Q9NRF8 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.46□□□□□ -2.02
CTPS2Q9NRF8 RNU6-289P-201ENST00000364093 107 ntBASIC2.46□□□□□ -2.02
CTPS2Q9NRF8 SNORA25.6-201ENST00000364121 118 ntBASIC2.46□□□□□ -2.02
CTPS2Q9NRF8 RNU6-777P-201ENST00000364265 104 ntBASIC2.46□□□□□ -2.02
CTPS2Q9NRF8 RNU6-76P-201ENST00000384060 104 ntBASIC2.46□□□□□ -2.02
CTPS2Q9NRF8 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CTPS2Q9NRF8 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CTPS2Q9NRF8 RNU6-584P-201ENST00000410350 95 ntBASIC2.46□□□□□ -2.02
CTPS2Q9NRF8 AC096664.2-201ENST00000411843 406 ntBASIC2.46□□□□□ -2.02
CTPS2Q9NRF8 SSR1P2-201ENST00000415208 787 ntBASIC2.46□□□□□ -2.02
CTPS2Q9NRF8 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.46□□□□□ -2.02
CTPS2Q9NRF8 OR4K11P-201ENST00000431829 904 ntBASIC2.46□□□□□ -2.02
CTPS2Q9NRF8 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.46□□□□□ -2.02
CTPS2Q9NRF8 AC084290.1-201ENST00000434995 374 ntBASIC2.46□□□□□ -2.02
CTPS2Q9NRF8 AC090774.1-201ENST00000435925 246 ntBASIC2.46□□□□□ -2.02
CTPS2Q9NRF8 AC107083.1-201ENST00000439643 279 ntBASIC2.46□□□□□ -2.02
CTPS2Q9NRF8 MTND3P1-201ENST00000441336 220 ntBASIC2.46□□□□□ -2.02
CTPS2Q9NRF8 ST13P20-201ENST00000447996 1065 ntBASIC2.46□□□□□ -2.02
CTPS2Q9NRF8 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.46□□□□□ -2.02
CTPS2Q9NRF8 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.46□□□□□ -2.02
CTPS2Q9NRF8 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.46□□□□□ -2.02
CTPS2Q9NRF8 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.46□□□□□ -2.02
CTPS2Q9NRF8 RPL7P18-201ENST00000478965 734 ntBASIC2.46□□□□□ -2.02
CTPS2Q9NRF8 RPS3AP14-201ENST00000483907 780 ntBASIC2.46□□□□□ -2.02
CTPS2Q9NRF8 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.46□□□□□ -2.02
CTPS2Q9NRF8 AC091951.3-201ENST00000504093 246 ntBASIC2.46□□□□□ -2.02
CTPS2Q9NRF8 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.46□□□□□ -2.02
CTPS2Q9NRF8 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
CTPS2Q9NRF8 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.46□□□□□ -2.02
CTPS2Q9NRF8 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.46□□□□□ -2.02
CTPS2Q9NRF8 RN7SKP40-201ENST00000517211 242 ntBASIC2.46□□□□□ -2.02
CTPS2Q9NRF8 AC100870.1-201ENST00000522035 505 ntBASIC2.46□□□□□ -2.02
CTPS2Q9NRF8 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.46□□□□□ -2.02
CTPS2Q9NRF8 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms