Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AC022960.3-201ENST00000619794 441 ntBASIC2.31□□□□□ -2.04
HMG20AQ9NP66 AP000484.1-201ENST00000620067 1252 ntBASIC2.31□□□□□ -2.04
HMG20AQ9NP66 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.31□□□□□ -2.04
HMG20AQ9NP66 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.31□□□□□ -2.04
HMG20AQ9NP66 CRYM-AS1-204ENST00000637983 556 ntBASIC2.31□□□□□ -2.04
HMG20AQ9NP66 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
HMG20AQ9NP66 AL139276.1-201ENST00000311910 1001 ntBASIC2.3□□□□□ -2.04
HMG20AQ9NP66 MIRLET7G-201ENST00000362280 84 ntBASIC2.3□□□□□ -2.04
HMG20AQ9NP66 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.3□□□□□ -2.04
HMG20AQ9NP66 RNU6-757P-201ENST00000410334 100 ntBASIC2.3□□□□□ -2.04
HMG20AQ9NP66 RNU6-584P-201ENST00000410350 95 ntBASIC2.3□□□□□ -2.04
HMG20AQ9NP66 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.3□□□□□ -2.04
HMG20AQ9NP66 MTCYBP38-201ENST00000417160 1123 ntBASIC2.3□□□□□ -2.04
HMG20AQ9NP66 AL645937.1-202ENST00000421799 937 ntBASIC2.3□□□□□ -2.04
HMG20AQ9NP66 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.3□□□□□ -2.04
HMG20AQ9NP66 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.3□□□□□ -2.04
HMG20AQ9NP66 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.3□□□□□ -2.04
HMG20AQ9NP66 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.3□□□□□ -2.04
HMG20AQ9NP66 AL031659.1-201ENST00000447075 539 ntBASIC2.3□□□□□ -2.04
HMG20AQ9NP66 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.3□□□□□ -2.04
HMG20AQ9NP66 S100A11P2-201ENST00000467589 312 ntBASIC2.3□□□□□ -2.04
HMG20AQ9NP66 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.3□□□□□ -2.04
HMG20AQ9NP66 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.3□□□□□ -2.04
HMG20AQ9NP66 HIGD1AP13-201ENST00000509878 289 ntBASIC2.3□□□□□ -2.04
HMG20AQ9NP66 TPT1P8-201ENST00000510120 555 ntBASIC2.3□□□□□ -2.04
HMG20AQ9NP66 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.3□□□□□ -2.04
HMG20AQ9NP66 RNU6-528P-201ENST00000516926 100 ntBASIC2.3□□□□□ -2.04
HMG20AQ9NP66 RNU1-104P-201ENST00000517280 175 ntBASIC2.3□□□□□ -2.04
HMG20AQ9NP66 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.3□□□□□ -2.04
HMG20AQ9NP66 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
HMG20AQ9NP66 COX6CP8-201ENST00000522620 226 ntBASIC2.3□□□□□ -2.04
HMG20AQ9NP66 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.3□□□□□ -2.04
HMG20AQ9NP66 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.3□□□□□ -2.04
HMG20AQ9NP66 AC090615.1-201ENST00000577519 154 ntBASIC2.3□□□□□ -2.04
HMG20AQ9NP66 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.3□□□□□ -2.04
HMG20AQ9NP66 AL450336.1-201ENST00000605180 586 ntBASIC2.3□□□□□ -2.04
HMG20AQ9NP66 AL158042.1-201ENST00000605338 460 ntBASIC2.3□□□□□ -2.04
HMG20AQ9NP66 AC009570.1-201ENST00000609599 745 ntBASIC2.3□□□□□ -2.04
HMG20AQ9NP66 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
HMG20AQ9NP66 AC006213.4-201ENST00000616184 634 ntBASIC2.3□□□□□ -2.04
HMG20AQ9NP66 AL357080.1-201ENST00000617394 239 ntBASIC2.3□□□□□ -2.04
HMG20AQ9NP66 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.3□□□□□ -2.04
HMG20AQ9NP66 AL391262.2-201ENST00000622466 494 ntBASIC2.3□□□□□ -2.04
HMG20AQ9NP66 AP001002.2-201ENST00000625137 386 ntBASIC2.3□□□□□ -2.04
HMG20AQ9NP66 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.3□□□□□ -2.04
HMG20AQ9NP66 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
HMG20AQ9NP66 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.3□□□□□ -2.04
HMG20AQ9NP66 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.3□□□□□ -2.04
HMG20AQ9NP66 AL390862.1-201ENST00000635467 1469 ntBASIC2.3□□□□□ -2.04
HMG20AQ9NP66 PABPC1P9-201ENST00000426076 1612 ntBASIC2.3□□□□□ -2.04
HMG20AQ9NP66 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.3□□□□□ -2.04
HMG20AQ9NP66 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.3□□□□□ -2.04
HMG20AQ9NP66 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.29□□□□□ -2.04
HMG20AQ9NP66 AC135776.4-201ENST00000624300 1904 ntBASIC2.29□□□□□ -2.04
HMG20AQ9NP66 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.29□□□□□ -2.04
HMG20AQ9NP66 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.29□□□□□ -2.04
HMG20AQ9NP66 SNORA67.1-201ENST00000364749 141 ntBASIC2.29□□□□□ -2.04
HMG20AQ9NP66 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.29□□□□□ -2.04
HMG20AQ9NP66 SNORA18.3-201ENST00000384122 132 ntBASIC2.29□□□□□ -2.04
HMG20AQ9NP66 RNU6-83P-201ENST00000384568 112 ntBASIC2.29□□□□□ -2.04
HMG20AQ9NP66 SNORA44-201ENST00000384584 132 ntBASIC2.29□□□□□ -2.04
HMG20AQ9NP66 MIR513B-201ENST00000385136 84 ntBASIC2.29□□□□□ -2.04
HMG20AQ9NP66 AL138827.1-201ENST00000402666 306 ntBASIC2.29□□□□□ -2.04
HMG20AQ9NP66 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.29□□□□□ -2.04
HMG20AQ9NP66 AC112220.1-201ENST00000434628 355 ntBASIC2.29□□□□□ -2.04
HMG20AQ9NP66 MTCYBP34-201ENST00000439552 670 ntBASIC2.29□□□□□ -2.04
HMG20AQ9NP66 MTND3P1-201ENST00000441336 220 ntBASIC2.29□□□□□ -2.04
HMG20AQ9NP66 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
HMG20AQ9NP66 AL513328.1-201ENST00000446460 224 ntBASIC2.29□□□□□ -2.04
HMG20AQ9NP66 NANOGNBP1-201ENST00000448444 480 ntBASIC2.29□□□□□ -2.04
HMG20AQ9NP66 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.29□□□□□ -2.04
HMG20AQ9NP66 ARPC3P5-201ENST00000448802 534 ntBASIC2.29□□□□□ -2.04
HMG20AQ9NP66 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.29□□□□□ -2.04
HMG20AQ9NP66 SNORA31.22-201ENST00000517204 135 ntBASIC2.29□□□□□ -2.04
HMG20AQ9NP66 IGLV3-17-201ENST00000519099 244 ntBASIC2.29□□□□□ -2.04
HMG20AQ9NP66 ERHP1-201ENST00000523006 310 ntBASIC2.29□□□□□ -2.04
HMG20AQ9NP66 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.29□□□□□ -2.04
HMG20AQ9NP66 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.29□□□□□ -2.04
HMG20AQ9NP66 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.29□□□□□ -2.04
HMG20AQ9NP66 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
HMG20AQ9NP66 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.29□□□□□ -2.04
HMG20AQ9NP66 AGGF1P5-201ENST00000567900 919 ntBASIC2.29□□□□□ -2.04
HMG20AQ9NP66 AC022662.1-201ENST00000580252 331 ntBASIC2.29□□□□□ -2.04
HMG20AQ9NP66 AC010620.2-201ENST00000600135 313 ntBASIC2.29□□□□□ -2.04
HMG20AQ9NP66 AP001429.1-201ENST00000602568 530 ntBASIC2.29□□□□□ -2.04
HMG20AQ9NP66 AC009220.3-201ENST00000604318 586 ntBASIC2.29□□□□□ -2.04
HMG20AQ9NP66 NUTF2P8-201ENST00000604593 363 ntBASIC2.29□□□□□ -2.04
HMG20AQ9NP66 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.29□□□□□ -2.04
HMG20AQ9NP66 AL139418.1-201ENST00000613613 177 ntBASIC2.29□□□□□ -2.04
HMG20AQ9NP66 AC008443.7-201ENST00000622195 246 ntBASIC2.29□□□□□ -2.04
HMG20AQ9NP66 AC090772.4-201ENST00000623599 362 ntBASIC2.29□□□□□ -2.04
HMG20AQ9NP66 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
HMG20AQ9NP66 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.29□□□□□ -2.04
HMG20AQ9NP66 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.29□□□□□ -2.04
HMG20AQ9NP66 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
HMG20AQ9NP66 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HMG20AQ9NP66 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
HMG20AQ9NP66 RNU6-1207P-201ENST00000384343 107 ntBASIC2.28□□□□□ -2.04
HMG20AQ9NP66 RNA5SP21-201ENST00000410917 96 ntBASIC2.28□□□□□ -2.04
HMG20AQ9NP66 MORF4L1P6-201ENST00000418771 268 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms