Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.55□□□□□ -1.52
NUCKS1Q9H1E3 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NUCKS1Q9H1E3 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NUCKS1Q9H1E3 AC063976.2-201ENST00000425667 3556 ntBASIC5.54□□□□□ -1.52
NUCKS1Q9H1E3 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
NUCKS1Q9H1E3 RNU6-1329P-201ENST00000365664 107 ntBASIC5.54□□□□□ -1.52
NUCKS1Q9H1E3 MIR215-201ENST00000384858 110 ntBASIC5.54□□□□□ -1.52
NUCKS1Q9H1E3 AC069213.2-201ENST00000420238 366 ntBASIC5.54□□□□□ -1.52
NUCKS1Q9H1E3 RPS12P5-201ENST00000423449 371 ntBASIC5.54□□□□□ -1.52
NUCKS1Q9H1E3 AC108075.1-201ENST00000424692 529 ntBASIC5.54□□□□□ -1.52
NUCKS1Q9H1E3 RPL23AP25-201ENST00000430973 463 ntBASIC5.54□□□□□ -1.52
NUCKS1Q9H1E3 AC127537.2-201ENST00000439258 465 ntBASIC5.54□□□□□ -1.52
NUCKS1Q9H1E3 RNU7-120P-201ENST00000459334 63 ntBASIC5.54□□□□□ -1.52
NUCKS1Q9H1E3 RNU7-138P-201ENST00000459479 64 ntBASIC5.54□□□□□ -1.52
NUCKS1Q9H1E3 RPL7P49-201ENST00000471402 708 ntBASIC5.54□□□□□ -1.52
NUCKS1Q9H1E3 RN7SL799P-201ENST00000475891 298 ntBASIC5.54□□□□□ -1.52
NUCKS1Q9H1E3 AP000926.1-201ENST00000479573 241 ntBASIC5.54□□□□□ -1.52
NUCKS1Q9H1E3 RPS21P4-201ENST00000487122 248 ntBASIC5.54□□□□□ -1.52
NUCKS1Q9H1E3 SNORA25.14-201ENST00000516481 132 ntBASIC5.54□□□□□ -1.52
NUCKS1Q9H1E3 AC144568.1-201ENST00000520139 137 ntBASIC5.54□□□□□ -1.52
NUCKS1Q9H1E3 AC100870.1-201ENST00000522035 505 ntBASIC5.54□□□□□ -1.52
NUCKS1Q9H1E3 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.54□□□□□ -1.52
NUCKS1Q9H1E3 CBX3P4-201ENST00000538909 354 ntBASIC5.54□□□□□ -1.52
NUCKS1Q9H1E3 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.54□□□□□ -1.52
NUCKS1Q9H1E3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.54□□□□□ -1.52
NUCKS1Q9H1E3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC5.54□□□□□ -1.52
NUCKS1Q9H1E3 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.54□□□□□ -1.52
NUCKS1Q9H1E3 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.54□□□□□ -1.52
NUCKS1Q9H1E3 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
NUCKS1Q9H1E3 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.54□□□□□ -1.52
NUCKS1Q9H1E3 MIR1244-1-201ENST00000612829 85 ntBASIC5.54□□□□□ -1.52
NUCKS1Q9H1E3 DLEU2_2.2-201ENST00000615474 90 ntBASIC5.54□□□□□ -1.52
NUCKS1Q9H1E3 MIR1244-3-201ENST00000635744 85 ntBASIC5.54□□□□□ -1.52
NUCKS1Q9H1E3 MIR1244-2-201ENST00000636449 85 ntBASIC5.54□□□□□ -1.52
NUCKS1Q9H1E3 MIR1244-4-202ENST00000636813 85 ntBASIC5.54□□□□□ -1.52
NUCKS1Q9H1E3 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.54□□□□□ -1.52
NUCKS1Q9H1E3 SCARNA15-201ENST00000607520 4325 ntBASIC5.54□□□□□ -1.52
NUCKS1Q9H1E3 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NUCKS1Q9H1E3 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 IRF5P1-201ENST00000504852 2164 ntBASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 Y_RNA.83-201ENST00000363005 113 ntBASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 SNORA67-201ENST00000384423 137 ntBASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 MIR1182-201ENST00000408363 97 ntBASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 RPL21P24-201ENST00000413752 448 ntBASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 AL591704.1-201ENST00000432574 275 ntBASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 AL163193.1-201ENST00000444895 788 ntBASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 Z92846.1-201ENST00000456203 268 ntBASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 RN7SL172P-201ENST00000460535 303 ntBASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 RN7SL30P-201ENST00000488416 306 ntBASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 AC072052.1-201ENST00000496556 306 ntBASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 AC008953.1-201ENST00000497334 318 ntBASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 RPS4XP20-201ENST00000505751 772 ntBASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 HMGB3P16-201ENST00000508037 287 ntBASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 AC107393.1-201ENST00000512403 346 ntBASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 Y_RNA.687-201ENST00000516558 91 ntBASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 RNU6-347P-201ENST00000516658 105 ntBASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 AC104576.1-201ENST00000524225 88 ntBASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 DEFB108E-201ENST00000524692 240 ntBASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 MIR4675-201ENST00000577898 77 ntBASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 RN7SL435P-201ENST00000584418 282 ntBASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 OR7E18P-201ENST00000592589 702 ntBASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 AC069307.1-201ENST00000602820 447 ntBASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 AC004832.4-201ENST00000608952 331 ntBASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 C4BPAP1-201ENST00000415474 1893 ntBASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
NUCKS1Q9H1E3 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NUCKS1Q9H1E3 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NUCKS1Q9H1E3 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.52□□□□□ -1.53
NUCKS1Q9H1E3 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.52□□□□□ -1.53
NUCKS1Q9H1E3 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
NUCKS1Q9H1E3 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.52□□□□□ -1.53
NUCKS1Q9H1E3 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
NUCKS1Q9H1E3 RNU6-1243P-201ENST00000364028 107 ntBASIC5.52□□□□□ -1.53
NUCKS1Q9H1E3 SNORA2.3-201ENST00000383920 135 ntBASIC5.52□□□□□ -1.53
NUCKS1Q9H1E3 EIF4EP2-201ENST00000422816 654 ntBASIC5.52□□□□□ -1.53
NUCKS1Q9H1E3 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.52□□□□□ -1.53
NUCKS1Q9H1E3 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.52□□□□□ -1.53
NUCKS1Q9H1E3 PTMAP3-201ENST00000447474 330 ntBASIC5.52□□□□□ -1.53
NUCKS1Q9H1E3 AC010733.1-201ENST00000451515 401 ntBASIC5.52□□□□□ -1.53
NUCKS1Q9H1E3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.52□□□□□ -1.53
NUCKS1Q9H1E3 AL136097.1-201ENST00000456945 913 ntBASIC5.52□□□□□ -1.53
NUCKS1Q9H1E3 RN7SL727P-201ENST00000482164 296 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms