Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 AC021382.1-201ENST00000483523 359 ntBASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 AC134050.1-201ENST00000495088 933 ntBASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 COX6CP8-201ENST00000522620 226 ntBASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 DEFB131D-201ENST00000526803 184 ntBASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 AP000857.1-201ENST00000532151 543 ntBASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 TRAV28-201ENST00000557548 323 ntBASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 AC010546.1-201ENST00000569391 485 ntBASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 AL353997.4-201ENST00000586196 166 ntBASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 BNIP3P39-201ENST00000601077 554 ntBASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 AC012119.1-201ENST00000603184 222 ntBASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 DUXAP3-201ENST00000603616 594 ntBASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 AC013476.2-201ENST00000614456 459 ntBASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 AC009268.2-201ENST00000621925 457 ntBASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 AP003399.1-201ENST00000637534 361 ntBASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 RNU6-7-201ENST00000364784 107 ntBASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 SNORA23-201ENST00000365128 182 ntBASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 RNU6-8-201ENST00000365467 107 ntBASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 RNU6-925P-201ENST00000384629 104 ntBASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 SNORD88.1-201ENST00000408684 91 ntBASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 RNA5SP21-201ENST00000410917 96 ntBASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 COTL1P1-201ENST00000422309 375 ntBASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 AL358075.3-201ENST00000426289 226 ntBASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 AC105272.1-201ENST00000438604 198 ntBASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 MTND5P14-201ENST00000441481 1267 ntBASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 PIGFP3-201ENST00000441918 722 ntBASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 MTCYBP3-201ENST00000445588 1137 ntBASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 AL009048.1-201ENST00000450437 298 ntBASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 ZNF886P-201ENST00000450781 723 ntBASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 AP1S2P1-201ENST00000457344 379 ntBASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 RPL23AP11-201ENST00000475260 469 ntBASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 RPL23AP70-201ENST00000483361 460 ntBASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 RPS15AP34-201ENST00000487776 387 ntBASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 AC138853.1-201ENST00000503549 823 ntBASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 UBE2V1P12-201ENST00000503954 474 ntBASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 AC138761.3-201ENST00000579993 334 ntBASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 AP001269.3-201ENST00000588718 329 ntBASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 AC092953.2-201ENST00000608000 699 ntBASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 AC005046.1-201ENST00000608515 625 ntBASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 AC131235.4-201ENST00000609288 620 ntBASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 AL133445.2-201ENST00000611191 527 ntBASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.78□□□□□ -1.96
POLR1EQ9GZS1 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.77□□□□□ -1.97
POLR1EQ9GZS1 ZNF29P-201ENST00000225587 168 ntBASIC2.77□□□□□ -1.97
POLR1EQ9GZS1 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
POLR1EQ9GZS1 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
POLR1EQ9GZS1 Y_RNA.192-201ENST00000363977 102 ntBASIC2.77□□□□□ -1.97
POLR1EQ9GZS1 MTND4P13-201ENST00000402078 1023 ntBASIC2.77□□□□□ -1.97
POLR1EQ9GZS1 RNU6-516P-201ENST00000411381 104 ntBASIC2.77□□□□□ -1.97
POLR1EQ9GZS1 AL592148.1-201ENST00000413568 445 ntBASIC2.77□□□□□ -1.97
POLR1EQ9GZS1 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.77□□□□□ -1.97
POLR1EQ9GZS1 ATP5F1P1-201ENST00000433775 569 ntBASIC2.77□□□□□ -1.97
POLR1EQ9GZS1 AC004854.1-201ENST00000440356 349 ntBASIC2.77□□□□□ -1.97
POLR1EQ9GZS1 FGF7P5-201ENST00000441829 291 ntBASIC2.77□□□□□ -1.97
POLR1EQ9GZS1 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.77□□□□□ -1.97
POLR1EQ9GZS1 AC021146.8-201ENST00000507455 733 ntBASIC2.77□□□□□ -1.97
POLR1EQ9GZS1 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
POLR1EQ9GZS1 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.77□□□□□ -1.97
POLR1EQ9GZS1 AC007954.1-201ENST00000554198 494 ntBASIC2.77□□□□□ -1.97
POLR1EQ9GZS1 CYCSP2-201ENST00000558168 301 ntBASIC2.77□□□□□ -1.97
POLR1EQ9GZS1 LARP7P3-201ENST00000579888 337 ntBASIC2.77□□□□□ -1.97
POLR1EQ9GZS1 OR4K7P-201ENST00000580232 945 ntBASIC2.77□□□□□ -1.97
POLR1EQ9GZS1 ELOCP29-201ENST00000588193 334 ntBASIC2.77□□□□□ -1.97
POLR1EQ9GZS1 AC002545.1-201ENST00000592511 181 ntBASIC2.77□□□□□ -1.97
POLR1EQ9GZS1 AL161729.4-201ENST00000604650 476 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms