Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 MTCO2P15-201ENST00000532655 656 ntBASIC4.18□□□□□ -1.74
CHMP4AQ9BY43 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.18□□□□□ -1.74
CHMP4AQ9BY43 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.18□□□□□ -1.74
CHMP4AQ9BY43 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.18□□□□□ -1.74
CHMP4AQ9BY43 AC012468.1-201ENST00000604888 430 ntBASIC4.18□□□□□ -1.74
CHMP4AQ9BY43 AC016597.2-201ENST00000613256 341 ntBASIC4.18□□□□□ -1.74
CHMP4AQ9BY43 AC022960.3-201ENST00000619794 441 ntBASIC4.18□□□□□ -1.74
CHMP4AQ9BY43 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.18□□□□□ -1.74
CHMP4AQ9BY43 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.18□□□□□ -1.74
CHMP4AQ9BY43 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
CHMP4AQ9BY43 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 RPL21P132-201ENST00000331267 462 ntBASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 SNORA68.1-201ENST00000364537 132 ntBASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 RNU6-278P-201ENST00000390945 109 ntBASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 RPL21P75-201ENST00000396599 483 ntBASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 RPL21P28-201ENST00000401418 483 ntBASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 AL592114.1-201ENST00000403842 483 ntBASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 RNU6-757P-201ENST00000410334 100 ntBASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 AC244035.1-201ENST00000430042 390 ntBASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 GTF2IP20-201ENST00000431663 360 ntBASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 CYCSP32-201ENST00000440548 321 ntBASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 RPL23AP20-201ENST00000447965 421 ntBASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 RPL37P4-201ENST00000448908 268 ntBASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 RPL21P39-201ENST00000463605 483 ntBASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 RPL21P93-201ENST00000480465 489 ntBASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 AC087190.1-201ENST00000484462 480 ntBASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 AC093591.1-201ENST00000491435 481 ntBASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 RPL21P16-201ENST00000495531 483 ntBASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 AC104685.1-201ENST00000502445 371 ntBASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 AC021146.5-201ENST00000503544 545 ntBASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 RN7SKP40-201ENST00000517211 242 ntBASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 SCARNA11.3-201ENST00000517276 130 ntBASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 AL359212.1-201ENST00000556608 614 ntBASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 AL162713.1-201ENST00000604480 262 ntBASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 AC135507.1-201ENST00000607214 561 ntBASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 AC024933.1-201ENST00000608472 348 ntBASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 AC107294.1-201ENST00000609524 467 ntBASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 AL391262.2-201ENST00000622466 494 ntBASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 OR4G3P-201ENST00000633500 913 ntBASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.17□□□□□ -1.74
CHMP4AQ9BY43 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4.16□□□□□ -1.74
CHMP4AQ9BY43 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
CHMP4AQ9BY43 OR1S2-201ENST00000302592 978 ntBASIC4.16□□□□□ -1.74
CHMP4AQ9BY43 Y_RNA.333-201ENST00000365274 102 ntBASIC4.16□□□□□ -1.74
CHMP4AQ9BY43 RNA5SP88-201ENST00000365560 109 ntBASIC4.16□□□□□ -1.74
CHMP4AQ9BY43 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CHMP4AQ9BY43 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.16□□□□□ -1.74
CHMP4AQ9BY43 SNORA26.7-201ENST00000391288 122 ntBASIC4.16□□□□□ -1.74
CHMP4AQ9BY43 ANAPC10P1-201ENST00000395991 556 ntBASIC4.16□□□□□ -1.74
CHMP4AQ9BY43 AL357075.1-201ENST00000404107 726 ntBASIC4.16□□□□□ -1.74
CHMP4AQ9BY43 AL513475.1-201ENST00000406602 315 ntBASIC4.16□□□□□ -1.74
CHMP4AQ9BY43 RN7SKP285-201ENST00000410137 318 ntBASIC4.16□□□□□ -1.74
CHMP4AQ9BY43 RPL26P27-201ENST00000414397 437 ntBASIC4.16□□□□□ -1.74
CHMP4AQ9BY43 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.16□□□□□ -1.74
CHMP4AQ9BY43 RPL23AP83-201ENST00000434984 473 ntBASIC4.16□□□□□ -1.74
CHMP4AQ9BY43 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.16□□□□□ -1.74
CHMP4AQ9BY43 CR769776.1-201ENST00000441254 787 ntBASIC4.16□□□□□ -1.74
CHMP4AQ9BY43 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.16□□□□□ -1.74
CHMP4AQ9BY43 OR2A20P-203ENST00000498397 1268 ntBASIC4.16□□□□□ -1.74
CHMP4AQ9BY43 RNA5SP385-201ENST00000515947 110 ntBASIC4.16□□□□□ -1.74
CHMP4AQ9BY43 RN7SKP258-201ENST00000517151 304 ntBASIC4.16□□□□□ -1.74
CHMP4AQ9BY43 AC109329.2-201ENST00000519658 482 ntBASIC4.16□□□□□ -1.74
CHMP4AQ9BY43 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC4.16□□□□□ -1.74
CHMP4AQ9BY43 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.16□□□□□ -1.74
CHMP4AQ9BY43 AP004247.1-201ENST00000531556 1289 ntBASIC4.16□□□□□ -1.74
CHMP4AQ9BY43 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CHMP4AQ9BY43 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.16□□□□□ -1.74
CHMP4AQ9BY43 AC103810.1-201ENST00000579873 453 ntBASIC4.16□□□□□ -1.74
CHMP4AQ9BY43 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.16□□□□□ -1.74
CHMP4AQ9BY43 RPL23AP88-201ENST00000605759 454 ntBASIC4.16□□□□□ -1.74
CHMP4AQ9BY43 AC144521.1-201ENST00000607148 956 ntBASIC4.16□□□□□ -1.74
CHMP4AQ9BY43 AC131902.3-201ENST00000611767 581 ntBASIC4.16□□□□□ -1.74
CHMP4AQ9BY43 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
CHMP4AQ9BY43 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.16□□□□□ -1.74
CHMP4AQ9BY43 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CHMP4AQ9BY43 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CHMP4AQ9BY43 MIR19A-201ENST00000384878 82 ntBASIC4.15□□□□□ -1.75
CHMP4AQ9BY43 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.15□□□□□ -1.75
CHMP4AQ9BY43 BX682237.1-201ENST00000415016 335 ntBASIC4.15□□□□□ -1.75
CHMP4AQ9BY43 RPS15AP5-201ENST00000436276 388 ntBASIC4.15□□□□□ -1.75
CHMP4AQ9BY43 SNRPEP9-201ENST00000436794 238 ntBASIC4.15□□□□□ -1.75
CHMP4AQ9BY43 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.15□□□□□ -1.75
CHMP4AQ9BY43 Z75741.1-201ENST00000446793 314 ntBASIC4.15□□□□□ -1.75
CHMP4AQ9BY43 WASF1P1-201ENST00000447560 1131 ntBASIC4.15□□□□□ -1.75
CHMP4AQ9BY43 NANOGNBP1-201ENST00000448444 480 ntBASIC4.15□□□□□ -1.75
CHMP4AQ9BY43 AL590639.1-201ENST00000456484 337 ntBASIC4.15□□□□□ -1.75
CHMP4AQ9BY43 USP9YP25-201ENST00000457708 443 ntBASIC4.15□□□□□ -1.75
CHMP4AQ9BY43 SNORD11.1-201ENST00000459482 85 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms