Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 ERHP1-201ENST00000523006 310 ntBASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 OSBPL9P5-201ENST00000542581 171 ntBASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 AC004486.1-201ENST00000546846 233 ntBASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 AC128657.1-201ENST00000549459 145 ntBASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 COX6CP3-201ENST00000580869 223 ntBASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 MIR4999-201ENST00000585029 91 ntBASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 ATP1B3P1-201ENST00000605365 821 ntBASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 AP001521.1-201ENST00000609150 300 ntBASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 AC018755.4-201ENST00000619715 454 ntBASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 AC131159.1-201ENST00000621854 213 ntBASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 AL512506.2-201ENST00000624472 458 ntBASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 AC079416.3-201ENST00000624479 549 ntBASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 AC120349.2-201ENST00000625002 298 ntBASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 CRYM-AS1-204ENST00000637983 556 ntBASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 AP006437.1-201ENST00000641440 3685 ntBASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 AC099654.7-201ENST00000635788 2127 ntBASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 RNA5SP432-201ENST00000362480 116 ntBASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 RNU6-1200P-201ENST00000384162 107 ntBASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 PIGPP2-201ENST00000411569 458 ntBASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 HMGN2P35-201ENST00000412164 270 ntBASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 USP9YP26-201ENST00000421008 661 ntBASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 AL035407.1-201ENST00000429211 571 ntBASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 AL445567.1-201ENST00000439121 144 ntBASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 MTND5P2-201ENST00000442927 1142 ntBASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 AL034418.1-201ENST00000448675 860 ntBASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 ATG12P2-201ENST00000456830 416 ntBASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 RN7SL432P-201ENST00000484057 298 ntBASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 OR4G11P-201ENST00000492842 939 ntBASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 AC147055.4-201ENST00000504399 745 ntBASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 AC026412.2-201ENST00000512270 1075 ntBASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 MRPS33P3-201ENST00000513456 322 ntBASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 AP001189.2-201ENST00000527320 189 ntBASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 AP003461.1-201ENST00000528866 78 ntBASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 AC007834.2-201ENST00000536310 343 ntBASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 AC135628.1-201ENST00000568867 534 ntBASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 LARP7P2-201ENST00000575306 125 ntBASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 OR4K7P-201ENST00000580232 945 ntBASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 AC008088.1-201ENST00000580993 280 ntBASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 AC022069.1-201ENST00000582910 658 ntBASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 TPMTP1-201ENST00000592307 737 ntBASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 AL031281.1-201ENST00000604049 488 ntBASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 AC069304.2-201ENST00000605154 435 ntBASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 AC107982.1-201ENST00000507171 1300 ntBASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 SGO1P2-201ENST00000429458 1589 ntBASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RSPO3Q9BXY4 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
RSPO3Q9BXY4 AL136360.1-201ENST00000503377 1900 ntBASIC2.34□□□□□ -2.03
RSPO3Q9BXY4 AC069528.2-201ENST00000624849 1991 ntBASIC2.34□□□□□ -2.03
RSPO3Q9BXY4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
RSPO3Q9BXY4 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
RSPO3Q9BXY4 AL391994.1-201ENST00000254724 282 ntBASIC2.34□□□□□ -2.03
RSPO3Q9BXY4 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
RSPO3Q9BXY4 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
RSPO3Q9BXY4 AC062016.1-201ENST00000355719 319 ntBASIC2.34□□□□□ -2.03
RSPO3Q9BXY4 RNU6-1243P-201ENST00000364028 107 ntBASIC2.34□□□□□ -2.03
RSPO3Q9BXY4 Y_RNA.311-201ENST00000365068 96 ntBASIC2.34□□□□□ -2.03
RSPO3Q9BXY4 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.34□□□□□ -2.03
RSPO3Q9BXY4 SNORD116-8-201ENST00000384365 95 ntBASIC2.34□□□□□ -2.03
RSPO3Q9BXY4 RPS4XP8-201ENST00000402039 771 ntBASIC2.34□□□□□ -2.03
RSPO3Q9BXY4 AL121978.1-201ENST00000402778 359 ntBASIC2.34□□□□□ -2.03
RSPO3Q9BXY4 AL356057.2-201ENST00000403318 432 ntBASIC2.34□□□□□ -2.03
RSPO3Q9BXY4 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.34□□□□□ -2.03
RSPO3Q9BXY4 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms