Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.11□□□□□ -1.75
NDC1Q9BTX1 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.11□□□□□ -1.75
NDC1Q9BTX1 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.11□□□□□ -1.75
NDC1Q9BTX1 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.11□□□□□ -1.75
NDC1Q9BTX1 RNU6-559P-201ENST00000516151 98 ntBASIC4.11□□□□□ -1.75
NDC1Q9BTX1 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.11□□□□□ -1.75
NDC1Q9BTX1 MTND4P7-201ENST00000523876 130 ntBASIC4.11□□□□□ -1.75
NDC1Q9BTX1 AP003730.1-201ENST00000524605 285 ntBASIC4.11□□□□□ -1.75
NDC1Q9BTX1 AP001804.3-201ENST00000525146 880 ntBASIC4.11□□□□□ -1.75
NDC1Q9BTX1 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.11□□□□□ -1.75
NDC1Q9BTX1 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.11□□□□□ -1.75
NDC1Q9BTX1 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.11□□□□□ -1.75
NDC1Q9BTX1 MIR3171-201ENST00000584270 74 ntBASIC4.11□□□□□ -1.75
NDC1Q9BTX1 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.11□□□□□ -1.75
NDC1Q9BTX1 uc_338.34-201ENST00000617467 174 ntBASIC4.11□□□□□ -1.75
NDC1Q9BTX1 AC025034.2-201ENST00000623264 286 ntBASIC4.11□□□□□ -1.75
NDC1Q9BTX1 AC134503.1-201ENST00000633048 54 ntBASIC4.11□□□□□ -1.75
NDC1Q9BTX1 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.11□□□□□ -1.75
NDC1Q9BTX1 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.11□□□□□ -1.75
NDC1Q9BTX1 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
NDC1Q9BTX1 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.11□□□□□ -1.75
NDC1Q9BTX1 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.11□□□□□ -1.75
NDC1Q9BTX1 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
NDC1Q9BTX1 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
NDC1Q9BTX1 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NDC1Q9BTX1 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
NDC1Q9BTX1 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.1□□□□□ -1.75
NDC1Q9BTX1 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NDC1Q9BTX1 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NDC1Q9BTX1 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.1□□□□□ -1.75
NDC1Q9BTX1 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
NDC1Q9BTX1 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
NDC1Q9BTX1 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NDC1Q9BTX1 RNA5SP515-201ENST00000364570 118 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 Y_RNA.378-201ENST00000365652 113 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.1□□□□□ -1.75
NDC1Q9BTX1 Y_RNA.414-201ENST00000384011 101 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 SNORA24.1-201ENST00000384401 135 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 SNORA75.4-201ENST00000391278 119 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NDC1Q9BTX1 AC097374.1-203ENST00000400783 485 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 MIR548P-201ENST00000408336 84 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 ARL5AP1-201ENST00000418991 388 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 RAC1P6-201ENST00000423911 575 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.1□□□□□ -1.75
NDC1Q9BTX1 RN7SL432P-201ENST00000484057 298 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 MTCO1P29-201ENST00000496868 288 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
NDC1Q9BTX1 KLHL2P1-201ENST00000508691 521 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 AL592156.1-201ENST00000508758 304 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 PPBPP1-201ENST00000510807 373 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 AC008958.1-201ENST00000511047 682 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 RNU6-1170P-201ENST00000515974 106 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 RNU6-864P-201ENST00000516256 108 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 RNA5SP49-201ENST00000516450 115 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 SNORA25.17-201ENST00000517184 124 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 MIR2116-201ENST00000517221 80 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.1□□□□□ -1.75
NDC1Q9BTX1 CYCSP29-201ENST00000533731 318 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.1□□□□□ -1.75
NDC1Q9BTX1 TRAV8-5-201ENST00000537369 341 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.1□□□□□ -1.75
NDC1Q9BTX1 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.1□□□□□ -1.75
NDC1Q9BTX1 AC012182.1-201ENST00000570133 895 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 MIR5583-1-201ENST00000580941 59 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.1□□□□□ -1.75
NDC1Q9BTX1 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.1□□□□□ -1.75
NDC1Q9BTX1 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.1□□□□□ -1.75
NDC1Q9BTX1 AL670379.6-201ENST00000603753 252 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 AL670379.11-201ENST00000604059 253 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 AC008162.1-201ENST00000604718 254 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 AL670379.1-201ENST00000604752 252 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 AC010201.1-201ENST00000605051 540 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 AL670379.5-201ENST00000605253 252 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 AL670379.12-201ENST00000605291 253 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 AL670379.8-201ENST00000605353 252 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 AL670379.7-201ENST00000605823 252 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 AC092807.2-201ENST00000609367 243 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NDC1Q9BTX1 AP001486.3-201ENST00000615334 372 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 AL138721.1-201ENST00000616756 179 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 ZYXP1-201ENST00000617638 118 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 MTND4LP32-201ENST00000636111 270 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NDC1Q9BTX1 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
NDC1Q9BTX1 MTND4P14-201ENST00000435799 1354 ntBASIC4.1□□□□□ -1.75
NDC1Q9BTX1 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NDC1Q9BTX1 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
NDC1Q9BTX1 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
NDC1Q9BTX1 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.1□□□□□ -1.75
NDC1Q9BTX1 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.09□□□□□ -1.75
NDC1Q9BTX1 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NDC1Q9BTX1 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NDC1Q9BTX1 AC000123.3-201ENST00000624029 4975 ntBASIC4.09□□□□□ -1.75
NDC1Q9BTX1 DDX18P3-201ENST00000404856 2007 ntBASIC4.09□□□□□ -1.75
NDC1Q9BTX1 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
NDC1Q9BTX1 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NDC1Q9BTX1 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.09□□□□□ -1.75
NDC1Q9BTX1 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms