Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 AC008536.2-201ENST00000607284 349 ntBASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 AC103710.2-201ENST00000609912 942 ntBASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 AL355365.1-201ENST00000616480 294 ntBASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 AC139792.3-201ENST00000623525 224 ntBASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 AC009161.2-201ENST00000624626 138 ntBASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 OTUD4P1-201ENST00000237841 3067 ntBASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 GABPAP-201ENST00000419271 1356 ntBASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 RNU1-33P-201ENST00000364249 162 ntBASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 AL136372.1-201ENST00000403060 228 ntBASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 MTATP6P18-201ENST00000417994 673 ntBASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 PPP1R11P2-201ENST00000423543 382 ntBASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 AC005300.1-201ENST00000428401 373 ntBASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 AL139415.2-201ENST00000431968 163 ntBASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 AL353748.1-201ENST00000440753 474 ntBASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 AC016696.1-201ENST00000446949 318 ntBASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 SNRPGP6-201ENST00000451124 220 ntBASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 AC133473.1-201ENST00000455173 299 ntBASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 SNORD97-201ENST00000459187 142 ntBASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 RPS26P15-201ENST00000488067 348 ntBASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 AC078918.1-201ENST00000498515 228 ntBASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 AC026784.1-201ENST00000507986 352 ntBASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 AC011352.1-201ENST00000512300 793 ntBASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 SCARNA24.1-201ENST00000516465 137 ntBASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 AC090572.1-201ENST00000519251 160 ntBASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 HMGB1P41-201ENST00000520234 440 ntBASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 SNRPGP16-201ENST00000533275 226 ntBASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 GLUD1P4-201ENST00000590914 418 ntBASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 AL139395.1-201ENST00000603662 160 ntBASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 AC092954.2-201ENST00000609103 430 ntBASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 AC068944.2-201ENST00000610373 403 ntBASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 SNHG22-203ENST00000617833 660 ntBASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 C2orf27A-204ENST00000623058 969 ntBASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
PAAF1Q9BRP4 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 MTND5P1-201ENST00000445440 1375 ntBASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 HSPE1P11-201ENST00000339579 310 ntBASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 FRG1CP-201ENST00000358464 769 ntBASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 RNU6-108P-201ENST00000365558 107 ntBASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 RNU6-641P-201ENST00000384006 107 ntBASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 RNU6-76P-201ENST00000384060 104 ntBASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 MIR491-201ENST00000384877 84 ntBASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 SNORD115-47-201ENST00000391226 86 ntBASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 RPL23AP48-201ENST00000406913 488 ntBASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 HSPE1P8-201ENST00000406997 288 ntBASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 AL603766.1-201ENST00000407763 664 ntBASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 RN7SKP53-201ENST00000411337 315 ntBASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 BX323014.1-201ENST00000412876 237 ntBASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 DUTP6-201ENST00000425573 462 ntBASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 USP9YP18-201ENST00000425912 695 ntBASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 AC017083.1-201ENST00000428093 483 ntBASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 AL356535.1-201ENST00000440335 398 ntBASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 BNIP3P2-201ENST00000441221 577 ntBASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 RPS3AP12-201ENST00000443616 753 ntBASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 RPS24P6-201ENST00000452670 400 ntBASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 RPL23AP31-201ENST00000456160 467 ntBASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 RPL21P10-201ENST00000463521 490 ntBASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 AP000873.1-201ENST00000463987 400 ntBASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 AC023598.1-201ENST00000472521 361 ntBASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 NIPA2P2-201ENST00000496376 1083 ntBASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 ERHP1-201ENST00000523006 310 ntBASIC3.79□□□□□ -1.8
PAAF1Q9BRP4 AC093012.1-202ENST00000549403 582 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms