Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AC005498.1-201ENST00000592125 465 ntBASIC1.04□□□□□ -2.24
SPENQ96T58 RNU6-84P-201ENST00000607737 102 ntBASIC1.04□□□□□ -2.24
SPENQ96T58 AP002907.1-201ENST00000606361 1430 ntBASIC1.04□□□□□ -2.24
SPENQ96T58 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.04□□□□□ -2.24
SPENQ96T58 AC006270.2-201ENST00000578523 652 ntBASIC1.04□□□□□ -2.24
SPENQ96T58 SEPT7P9-203ENST00000604116 343 ntBASIC1.04□□□□□ -2.24
SPENQ96T58 AL590095.2-201ENST00000604136 117 ntBASIC1.04□□□□□ -2.24
SPENQ96T58 AC073413.2-201ENST00000604332 360 ntBASIC1.04□□□□□ -2.24
SPENQ96T58 AC011330.2-201ENST00000621680 635 ntBASIC1.04□□□□□ -2.24
SPENQ96T58 AC097655.1-201ENST00000635075 318 ntBASIC1.04□□□□□ -2.24
SPENQ96T58 MIR338-201ENST00000636369 67 ntBASIC1.04□□□□□ -2.24
SPENQ96T58 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.04□□□□□ -2.24
SPENQ96T58 VTRNA1-1-201ENST00000363120 99 ntBASIC1.04□□□□□ -2.24
SPENQ96T58 OR9N1P-202ENST00000494289 481 ntBASIC1.04□□□□□ -2.24
SPENQ96T58 AP004247.1-201ENST00000531556 1289 ntBASIC1.04□□□□□ -2.24
SPENQ96T58 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.04□□□□□ -2.24
SPENQ96T58 AP000560.1-201ENST00000624150 1937 ntBASIC1.03□□□□□ -2.24
SPENQ96T58 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.03□□□□□ -2.24
SPENQ96T58 RNU1-52P-201ENST00000384190 164 ntBASIC1.03□□□□□ -2.24
SPENQ96T58 AL596276.1-201ENST00000434465 418 ntBASIC1.03□□□□□ -2.24
SPENQ96T58 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.03□□□□□ -2.24
SPENQ96T58 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.03□□□□□ -2.24
SPENQ96T58 HAUS1P1-201ENST00000505275 832 ntBASIC1.03□□□□□ -2.24
SPENQ96T58 OR4V1P-201ENST00000525394 1140 ntBASIC1.03□□□□□ -2.24
SPENQ96T58 HSPE1P26-201ENST00000405341 275 ntBASIC1.03□□□□□ -2.24
SPENQ96T58 AC109780.2-201ENST00000413467 845 ntBASIC1.03□□□□□ -2.24
SPENQ96T58 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.03□□□□□ -2.24
SPENQ96T58 SNRPGP3-201ENST00000469405 227 ntBASIC1.03□□□□□ -2.24
SPENQ96T58 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.03□□□□□ -2.24
SPENQ96T58 RNA5SP309-201ENST00000516670 106 ntBASIC1.03□□□□□ -2.24
SPENQ96T58 RPL23AP88-201ENST00000605759 454 ntBASIC1.03□□□□□ -2.24
SPENQ96T58 C2orf27A-204ENST00000623058 969 ntBASIC1.03□□□□□ -2.24
SPENQ96T58 CNOT6LP1-201ENST00000559681 1462 ntBASIC1.03□□□□□ -2.24
SPENQ96T58 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.03□□□□□ -2.24
SPENQ96T58 RNA5SP331-201ENST00000364986 107 ntBASIC1.03□□□□□ -2.25
SPENQ96T58 AL030996.1-201ENST00000411430 235 ntBASIC1.03□□□□□ -2.25
SPENQ96T58 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.03□□□□□ -2.25
SPENQ96T58 XKRYP6-201ENST00000440468 1116 ntBASIC1.03□□□□□ -2.25
SPENQ96T58 XKRYP3-201ENST00000442113 1116 ntBASIC1.03□□□□□ -2.25
SPENQ96T58 DPPA3P1-201ENST00000448050 469 ntBASIC1.03□□□□□ -2.25
SPENQ96T58 RPL30P6-201ENST00000475925 342 ntBASIC1.03□□□□□ -2.25
SPENQ96T58 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC1.03□□□□□ -2.25
SPENQ96T58 DUXAP11-201ENST00000603858 526 ntBASIC1.03□□□□□ -2.25
SPENQ96T58 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
SPENQ96T58 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.02□□□□□ -2.25
SPENQ96T58 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.02□□□□□ -2.25
SPENQ96T58 AC004941.2-201ENST00000427009 228 ntBASIC1.02□□□□□ -2.25
SPENQ96T58 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC1.02□□□□□ -2.25
SPENQ96T58 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC1.02□□□□□ -2.25
SPENQ96T58 AC021755.4-201ENST00000616620 456 ntBASIC1.02□□□□□ -2.25
SPENQ96T58 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
SPENQ96T58 AL118496.1-201ENST00000440201 1812 ntBASIC1.02□□□□□ -2.25
SPENQ96T58 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC1.02□□□□□ -2.25
SPENQ96T58 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC1.02□□□□□ -2.25
SPENQ96T58 AC110792.2-201ENST00000510278 224 ntBASIC1.02□□□□□ -2.25
SPENQ96T58 SETP2-201ENST00000553886 926 ntBASIC1.02□□□□□ -2.25
SPENQ96T58 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.02□□□□□ -2.25
SPENQ96T58 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
SPENQ96T58 MIR1197-201ENST00000408818 88 ntBASIC1.02□□□□□ -2.25
SPENQ96T58 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.02□□□□□ -2.25
SPENQ96T58 AC007098.1-201ENST00000420122 367 ntBASIC1.02□□□□□ -2.25
SPENQ96T58 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC1.02□□□□□ -2.25
SPENQ96T58 AC092451.1-201ENST00000480211 153 ntBASIC1.02□□□□□ -2.25
SPENQ96T58 CD24P2-201ENST00000565486 219 ntBASIC1.02□□□□□ -2.25
SPENQ96T58 MIR7974-201ENST00000615835 79 ntBASIC1.02□□□□□ -2.25
SPENQ96T58 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
SPENQ96T58 U6.98-201ENST00000637157 84 ntBASIC1.02□□□□□ -2.25
SPENQ96T58 AC025263.3-201ENST00000622965 1396 ntBASIC1.01□□□□□ -2.25
SPENQ96T58 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
SPENQ96T58 AC073264.1-201ENST00000411508 416 ntBASIC1.01□□□□□ -2.25
SPENQ96T58 CR848007.2-201ENST00000424918 787 ntBASIC1.01□□□□□ -2.25
SPENQ96T58 Z85994.2-201ENST00000434327 452 ntBASIC1.01□□□□□ -2.25
SPENQ96T58 RPL21P131-201ENST00000497298 483 ntBASIC1.01□□□□□ -2.25
SPENQ96T58 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.01□□□□□ -2.25
SPENQ96T58 EEF1B2P4-201ENST00000551398 348 ntBASIC1.01□□□□□ -2.25
SPENQ96T58 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.01□□□□□ -2.25
SPENQ96T58 AC123912.5-201ENST00000605470 343 ntBASIC1.01□□□□□ -2.25
SPENQ96T58 AC006338.1-201ENST00000618453 749 ntBASIC1.01□□□□□ -2.25
SPENQ96T58 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC1.01□□□□□ -2.25
SPENQ96T58 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
SPENQ96T58 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.01□□□□□ -2.25
SPENQ96T58 AC012170.1-201ENST00000495139 359 ntBASIC1.01□□□□□ -2.25
SPENQ96T58 MTND4LP22-201ENST00000508209 276 ntBASIC1.01□□□□□ -2.25
SPENQ96T58 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.01□□□□□ -2.25
SPENQ96T58 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.01□□□□□ -2.25
SPENQ96T58 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC1.01□□□□□ -2.25
SPENQ96T58 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.01□□□□□ -2.25
SPENQ96T58 AC089999.1-201ENST00000460336 374 ntBASIC1.01□□□□□ -2.25
SPENQ96T58 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.01□□□□□ -2.25
SPENQ96T58 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC1.01□□□□□ -2.25
SPENQ96T58 RNU4-60P-201ENST00000517239 135 ntBASIC1.01□□□□□ -2.25
SPENQ96T58 AC018754.1-201ENST00000607486 925 ntBASIC1.01□□□□□ -2.25
SPENQ96T58 AC004943.3-201ENST00000624116 600 ntBASIC1.01□□□□□ -2.25
SPENQ96T58 CENPCP1-201ENST00000533085 2578 ntBASIC1□□□□□ -2.25
SPENQ96T58 RNU6-105P-201ENST00000363909 104 ntBASIC1□□□□□ -2.25
SPENQ96T58 CBX3P6-201ENST00000430257 527 ntBASIC1□□□□□ -2.25
SPENQ96T58 UBE2V1P13-201ENST00000436983 439 ntBASIC1□□□□□ -2.25
SPENQ96T58 OR6K5P-201ENST00000447050 945 ntBASIC1□□□□□ -2.25
SPENQ96T58 AL353718.1-201ENST00000451028 517 ntBASIC1□□□□□ -2.25
SPENQ96T58 AC092754.2-201ENST00000463506 460 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms