Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
TRIM43Q96BQ3 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.09□□□□□ -1.76
TRIM43Q96BQ3 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.09□□□□□ -1.76
TRIM43Q96BQ3 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
TRIM43Q96BQ3 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 HSPE1P11-201ENST00000339579 310 ntBASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 SNORD115-47-201ENST00000391226 86 ntBASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 HDGFP1-201ENST00000405943 252 ntBASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 MIR1183-201ENST00000408856 89 ntBASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 RPL21P112-201ENST00000434403 463 ntBASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 SNORA71B-202ENST00000439232 272 ntBASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 MTCO3P45-201ENST00000443036 613 ntBASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 AC003071.1-201ENST00000451219 789 ntBASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 AC019235.1-201ENST00000503847 207 ntBASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 VN1R104P-201ENST00000505115 1009 ntBASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 AC109927.2-201ENST00000506416 303 ntBASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 RNU2-27P-201ENST00000516185 142 ntBASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 SCARNA24.1-201ENST00000516465 137 ntBASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 RNU6-1178P-201ENST00000516674 107 ntBASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 AC123904.3-201ENST00000547218 814 ntBASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 HMGB1P33-201ENST00000563485 527 ntBASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 FAM60BP-201ENST00000578364 658 ntBASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 AF038458.1-201ENST00000588406 262 ntBASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 GLUD1P4-201ENST00000590914 418 ntBASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 AC007363.1-201ENST00000604736 620 ntBASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 AC004067.1-201ENST00000608733 700 ntBASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 LINC02471-203ENST00000641941 4752 ntBASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM43Q96BQ3 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 CR848007.1-201ENST00000442354 1699 ntBASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 AL157700.1-201ENST00000561973 1432 ntBASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 RNU6-511P-201ENST00000363496 107 ntBASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 SNORA7.2-201ENST00000364446 145 ntBASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 Y_RNA.248-201ENST00000364501 109 ntBASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 SNORA23-201ENST00000365128 182 ntBASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 Y_RNA.409-201ENST00000383990 98 ntBASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 Y_RNA.481-201ENST00000384373 102 ntBASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 U3.26-201ENST00000391236 204 ntBASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 AL136372.1-201ENST00000403060 228 ntBASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 MIR1289-1-201ENST00000408836 144 ntBASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 MTND1P23-201ENST00000416931 372 ntBASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 AC079780.1-201ENST00000428259 207 ntBASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 RPL23AP30-201ENST00000432419 501 ntBASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 RPL23AP20-201ENST00000447965 421 ntBASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 AC006480.1-201ENST00000449887 378 ntBASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 MTND2P24-201ENST00000453434 806 ntBASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 AP000873.1-201ENST00000463987 400 ntBASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 AL121769.1-201ENST00000469473 401 ntBASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 RAC1P2-201ENST00000511164 579 ntBASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 ARL2BPP6-201ENST00000512757 439 ntBASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 RNU6-840P-201ENST00000517275 65 ntBASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 AC100870.1-201ENST00000522035 505 ntBASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 OR4R1P-201ENST00000529879 463 ntBASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 AC109635.4-202ENST00000531666 412 ntBASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 AC011611.1-201ENST00000552179 197 ntBASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 AL512360.1-201ENST00000555346 234 ntBASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 AL606834.2-201ENST00000602954 668 ntBASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 AC017083.3-201ENST00000609955 700 ntBASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 AC135507.2-201ENST00000612443 309 ntBASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 uc_338.32-201ENST00000615087 172 ntBASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 SNHG22-203ENST00000617833 660 ntBASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM43Q96BQ3 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.06□□□□□ -1.76
TRIM43Q96BQ3 TAB3P1-202ENST00000452645 1634 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms