Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 RPL7P46-201ENST00000425129 740 ntBASIC3.63□□□□□ -1.83
SKA1Q96BD8 DPPA2P1-201ENST00000428060 556 ntBASIC3.63□□□□□ -1.83
SKA1Q96BD8 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.63□□□□□ -1.83
SKA1Q96BD8 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.63□□□□□ -1.83
SKA1Q96BD8 AC118469.1-201ENST00000442943 488 ntBASIC3.63□□□□□ -1.83
SKA1Q96BD8 ZNF114P1-201ENST00000453500 292 ntBASIC3.63□□□□□ -1.83
SKA1Q96BD8 AC006539.3-201ENST00000454258 129 ntBASIC3.63□□□□□ -1.83
SKA1Q96BD8 RPS29P12-201ENST00000460178 152 ntBASIC3.63□□□□□ -1.83
SKA1Q96BD8 AC023598.1-201ENST00000472521 361 ntBASIC3.63□□□□□ -1.83
SKA1Q96BD8 AC138853.1-201ENST00000503549 823 ntBASIC3.63□□□□□ -1.83
SKA1Q96BD8 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.63□□□□□ -1.83
SKA1Q96BD8 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.63□□□□□ -1.83
SKA1Q96BD8 RN7SKP258-201ENST00000517151 304 ntBASIC3.63□□□□□ -1.83
SKA1Q96BD8 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SKA1Q96BD8 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.63□□□□□ -1.83
SKA1Q96BD8 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.63□□□□□ -1.83
SKA1Q96BD8 NCAPGP2-201ENST00000557911 754 ntBASIC3.63□□□□□ -1.83
SKA1Q96BD8 AC068135.2-201ENST00000569293 1028 ntBASIC3.63□□□□□ -1.83
SKA1Q96BD8 MIR3146-201ENST00000580367 79 ntBASIC3.63□□□□□ -1.83
SKA1Q96BD8 MIR3922-201ENST00000585192 84 ntBASIC3.63□□□□□ -1.83
SKA1Q96BD8 AC122133.1-201ENST00000613964 233 ntBASIC3.63□□□□□ -1.83
SKA1Q96BD8 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.63□□□□□ -1.83
SKA1Q96BD8 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.63□□□□□ -1.83
SKA1Q96BD8 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.63□□□□□ -1.83
SKA1Q96BD8 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SKA1Q96BD8 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.62□□□□□ -1.83
SKA1Q96BD8 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SKA1Q96BD8 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SKA1Q96BD8 MIR30E-201ENST00000362104 92 ntBASIC3.62□□□□□ -1.83
SKA1Q96BD8 RNU6-533P-201ENST00000384144 107 ntBASIC3.62□□□□□ -1.83
SKA1Q96BD8 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.62□□□□□ -1.83
SKA1Q96BD8 Z99497.1-201ENST00000421282 135 ntBASIC3.62□□□□□ -1.83
SKA1Q96BD8 AL365203.2-201ENST00000423444 196 ntBASIC3.62□□□□□ -1.83
SKA1Q96BD8 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.62□□□□□ -1.83
SKA1Q96BD8 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.62□□□□□ -1.83
SKA1Q96BD8 RPS4XP2-201ENST00000458402 793 ntBASIC3.62□□□□□ -1.83
SKA1Q96BD8 RNU7-23P-201ENST00000459465 62 ntBASIC3.62□□□□□ -1.83
SKA1Q96BD8 AC087588.1-201ENST00000462203 316 ntBASIC3.62□□□□□ -1.83
SKA1Q96BD8 RPL21P10-201ENST00000463521 490 ntBASIC3.62□□□□□ -1.83
SKA1Q96BD8 AC092185.1-201ENST00000491371 97 ntBASIC3.62□□□□□ -1.83
SKA1Q96BD8 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.62□□□□□ -1.83
SKA1Q96BD8 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
SKA1Q96BD8 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
SKA1Q96BD8 RNA5SP290-201ENST00000517133 127 ntBASIC3.62□□□□□ -1.83
SKA1Q96BD8 AC025881.1-201ENST00000518851 512 ntBASIC3.62□□□□□ -1.83
SKA1Q96BD8 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.62□□□□□ -1.83
SKA1Q96BD8 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.62□□□□□ -1.83
SKA1Q96BD8 MIR4293-201ENST00000584305 78 ntBASIC3.62□□□□□ -1.83
SKA1Q96BD8 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SKA1Q96BD8 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.62□□□□□ -1.83
SKA1Q96BD8 AL359999.1-201ENST00000604513 294 ntBASIC3.62□□□□□ -1.83
SKA1Q96BD8 AC026790.2-201ENST00000606282 430 ntBASIC3.62□□□□□ -1.83
SKA1Q96BD8 AL355365.1-201ENST00000616480 294 ntBASIC3.62□□□□□ -1.83
SKA1Q96BD8 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
SKA1Q96BD8 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.62□□□□□ -1.83
SKA1Q96BD8 AC092435.3-201ENST00000565538 3654 ntBASIC3.62□□□□□ -1.83
SKA1Q96BD8 AC008669.1-201ENST00000565823 2178 ntBASIC3.62□□□□□ -1.83
SKA1Q96BD8 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SKA1Q96BD8 SRP72P2-201ENST00000344851 1979 ntBASIC3.62□□□□□ -1.83
SKA1Q96BD8 AC007496.3-201ENST00000624987 3443 ntBASIC3.61□□□□□ -1.83
SKA1Q96BD8 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SKA1Q96BD8 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SKA1Q96BD8 AC099654.7-201ENST00000635788 2127 ntBASIC3.61□□□□□ -1.83
SKA1Q96BD8 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SKA1Q96BD8 AP003122.5-201ENST00000527668 3766 ntBASIC3.61□□□□□ -1.83
SKA1Q96BD8 RNU1-105P-201ENST00000363470 161 ntBASIC3.61□□□□□ -1.83
SKA1Q96BD8 Y_RNA.560-201ENST00000384689 102 ntBASIC3.61□□□□□ -1.83
SKA1Q96BD8 RNVU1-14-201ENST00000384770 164 ntBASIC3.61□□□□□ -1.83
SKA1Q96BD8 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.61□□□□□ -1.83
SKA1Q96BD8 HSFY4P-201ENST00000415994 1181 ntBASIC3.61□□□□□ -1.83
SKA1Q96BD8 BTF3L4P3-201ENST00000418879 476 ntBASIC3.61□□□□□ -1.83
SKA1Q96BD8 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.61□□□□□ -1.83
SKA1Q96BD8 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.61□□□□□ -1.83
SKA1Q96BD8 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.61□□□□□ -1.83
SKA1Q96BD8 BX679664.1-201ENST00000434429 253 ntBASIC3.61□□□□□ -1.83
SKA1Q96BD8 AL714022.1-201ENST00000439897 151 ntBASIC3.61□□□□□ -1.83
SKA1Q96BD8 AL133217.1-201ENST00000450980 425 ntBASIC3.61□□□□□ -1.83
SKA1Q96BD8 RN7SL807P-201ENST00000470923 297 ntBASIC3.61□□□□□ -1.83
SKA1Q96BD8 AC116337.2-201ENST00000477662 156 ntBASIC3.61□□□□□ -1.83
SKA1Q96BD8 AF131216.2-201ENST00000512316 564 ntBASIC3.61□□□□□ -1.83
SKA1Q96BD8 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.61□□□□□ -1.83
SKA1Q96BD8 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.61□□□□□ -1.83
SKA1Q96BD8 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.61□□□□□ -1.83
SKA1Q96BD8 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.61□□□□□ -1.83
SKA1Q96BD8 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.61□□□□□ -1.83
SKA1Q96BD8 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.61□□□□□ -1.83
SKA1Q96BD8 AC123904.2-201ENST00000548059 300 ntBASIC3.61□□□□□ -1.83
SKA1Q96BD8 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.61□□□□□ -1.83
SKA1Q96BD8 RPL21P12-201ENST00000559810 515 ntBASIC3.61□□□□□ -1.83
SKA1Q96BD8 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.61□□□□□ -1.83
SKA1Q96BD8 AC037471.2-201ENST00000564941 598 ntBASIC3.61□□□□□ -1.83
SKA1Q96BD8 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.61□□□□□ -1.83
SKA1Q96BD8 AC006504.3-201ENST00000586818 523 ntBASIC3.61□□□□□ -1.83
SKA1Q96BD8 AC107294.3-201ENST00000609211 526 ntBASIC3.61□□□□□ -1.83
SKA1Q96BD8 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.61□□□□□ -1.83
SKA1Q96BD8 AF246928.1-201ENST00000623768 87 ntBASIC3.61□□□□□ -1.83
SKA1Q96BD8 AC068880.5-201ENST00000624331 290 ntBASIC3.61□□□□□ -1.83
SKA1Q96BD8 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.61□□□□□ -1.83
SKA1Q96BD8 AL732372.2-225ENST00000642124 456 ntBASIC3.61□□□□□ -1.83
SKA1Q96BD8 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms