Protein–RNA interactions for Protein: Q96A33

CCDC47, Coiled-coil domain-containing protein 47, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47Q96A33 RN7SKP140-201ENST00000411196 284 ntBASIC3.11□□□□□ -1.91
CCDC47Q96A33 EEF1A1P41-201ENST00000414667 207 ntBASIC3.11□□□□□ -1.91
CCDC47Q96A33 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC47Q96A33 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC47Q96A33 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC47Q96A33 EEF1E1P1-201ENST00000446998 430 ntBASIC3.11□□□□□ -1.91
CCDC47Q96A33 RPL21P134-201ENST00000453468 483 ntBASIC3.11□□□□□ -1.91
CCDC47Q96A33 AC003982.1-202ENST00000469928 248 ntBASIC3.11□□□□□ -1.91
CCDC47Q96A33 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC47Q96A33 RNU6-826P-201ENST00000516827 104 ntBASIC3.11□□□□□ -1.91
CCDC47Q96A33 RNA5SP291-201ENST00000517222 105 ntBASIC3.11□□□□□ -1.91
CCDC47Q96A33 NRON-201ENST00000517270 370 ntBASIC3.11□□□□□ -1.91
CCDC47Q96A33 HMGN1P28-201ENST00000521340 364 ntBASIC3.11□□□□□ -1.91
CCDC47Q96A33 SUB1P1-201ENST00000524415 382 ntBASIC3.11□□□□□ -1.91
CCDC47Q96A33 AC022080.3-201ENST00000544433 482 ntBASIC3.11□□□□□ -1.91
CCDC47Q96A33 GLYCAM1-201ENST00000546596 285 ntBASIC3.11□□□□□ -1.91
CCDC47Q96A33 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC47Q96A33 MTCYBP23-201ENST00000558717 1102 ntBASIC3.11□□□□□ -1.91
CCDC47Q96A33 MIR5195-201ENST00000583555 115 ntBASIC3.11□□□□□ -1.91
CCDC47Q96A33 AP001269.3-201ENST00000588718 329 ntBASIC3.11□□□□□ -1.91
CCDC47Q96A33 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC47Q96A33 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC47Q96A33 AL161729.4-201ENST00000604650 476 ntBASIC3.11□□□□□ -1.91
CCDC47Q96A33 AC007179.3-201ENST00000604976 235 ntBASIC3.11□□□□□ -1.91
CCDC47Q96A33 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.11□□□□□ -1.91
CCDC47Q96A33 AC099063.3-201ENST00000642066 185 ntBASIC3.11□□□□□ -1.91
CCDC47Q96A33 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CCDC47Q96A33 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
CCDC47Q96A33 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.11□□□□□ -1.91
CCDC47Q96A33 DDX43P2-201ENST00000604753 1354 ntBASIC3.11□□□□□ -1.91
CCDC47Q96A33 RNU6-461P-201ENST00000364195 107 ntBASIC3.1□□□□□ -1.91
CCDC47Q96A33 SNORA68.1-201ENST00000364537 132 ntBASIC3.1□□□□□ -1.91
CCDC47Q96A33 Y_RNA.465-201ENST00000384293 102 ntBASIC3.1□□□□□ -1.91
CCDC47Q96A33 RNU4-22P-201ENST00000411058 166 ntBASIC3.1□□□□□ -1.91
CCDC47Q96A33 USP9YP33-201ENST00000412220 421 ntBASIC3.1□□□□□ -1.91
CCDC47Q96A33 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC47Q96A33 AL096701.2-201ENST00000416920 238 ntBASIC3.1□□□□□ -1.91
CCDC47Q96A33 MTCYBP38-201ENST00000417160 1123 ntBASIC3.1□□□□□ -1.91
CCDC47Q96A33 GTF2IP20-201ENST00000431663 360 ntBASIC3.1□□□□□ -1.91
CCDC47Q96A33 RPS25P9-201ENST00000435591 252 ntBASIC3.1□□□□□ -1.91
CCDC47Q96A33 USP9YP35-201ENST00000435696 412 ntBASIC3.1□□□□□ -1.91
CCDC47Q96A33 COX7BP2-201ENST00000437976 242 ntBASIC3.1□□□□□ -1.91
CCDC47Q96A33 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC47Q96A33 AC005410.1-202ENST00000460347 485 ntBASIC3.1□□□□□ -1.91
CCDC47Q96A33 AC008571.1-201ENST00000467232 300 ntBASIC3.1□□□□□ -1.91
CCDC47Q96A33 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC47Q96A33 AC126182.1-201ENST00000478134 357 ntBASIC3.1□□□□□ -1.91
CCDC47Q96A33 AC108729.1-201ENST00000487812 947 ntBASIC3.1□□□□□ -1.91
CCDC47Q96A33 SUMO2P6-201ENST00000505273 288 ntBASIC3.1□□□□□ -1.91
CCDC47Q96A33 AC021146.8-201ENST00000507455 733 ntBASIC3.1□□□□□ -1.91
CCDC47Q96A33 AC116353.3-201ENST00000511215 249 ntBASIC3.1□□□□□ -1.91
CCDC47Q96A33 MRPS36P2-201ENST00000512569 299 ntBASIC3.1□□□□□ -1.91
CCDC47Q96A33 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC47Q96A33 COX6CP5-201ENST00000527162 228 ntBASIC3.1□□□□□ -1.91
CCDC47Q96A33 AL133271.1-201ENST00000538229 291 ntBASIC3.1□□□□□ -1.91
CCDC47Q96A33 AL391261.3-201ENST00000557194 520 ntBASIC3.1□□□□□ -1.91
CCDC47Q96A33 AC023813.2-201ENST00000564321 469 ntBASIC3.1□□□□□ -1.91
CCDC47Q96A33 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.1□□□□□ -1.91
CCDC47Q96A33 AC009712.1-201ENST00000564938 316 ntBASIC3.1□□□□□ -1.91
CCDC47Q96A33 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC47Q96A33 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.1□□□□□ -1.91
CCDC47Q96A33 TPMTP1-201ENST00000592307 737 ntBASIC3.1□□□□□ -1.91
CCDC47Q96A33 RPL12P50-201ENST00000603116 116 ntBASIC3.1□□□□□ -1.91
CCDC47Q96A33 AC090186.1-201ENST00000605991 572 ntBASIC3.1□□□□□ -1.91
CCDC47Q96A33 AC096577.2-201ENST00000611455 153 ntBASIC3.1□□□□□ -1.91
CCDC47Q96A33 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC47Q96A33 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
CCDC47Q96A33 AC073346.2-201ENST00000624724 2058 ntBASIC3.1□□□□□ -1.91
CCDC47Q96A33 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC47Q96A33 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC47Q96A33 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
CCDC47Q96A33 SNORD46.1-201ENST00000364139 104 ntBASIC3.09□□□□□ -1.91
CCDC47Q96A33 RNU6-754P-201ENST00000391166 107 ntBASIC3.09□□□□□ -1.91
CCDC47Q96A33 AL590004.2-201ENST00000404787 371 ntBASIC3.09□□□□□ -1.91
CCDC47Q96A33 MTND1P21-201ENST00000412991 285 ntBASIC3.09□□□□□ -1.91
CCDC47Q96A33 ZNF863P-201ENST00000426746 417 ntBASIC3.09□□□□□ -1.91
CCDC47Q96A33 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.09□□□□□ -1.91
CCDC47Q96A33 SUMO1P4-201ENST00000429430 302 ntBASIC3.09□□□□□ -1.91
CCDC47Q96A33 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC47Q96A33 UBE2V1P13-201ENST00000436983 439 ntBASIC3.09□□□□□ -1.91
CCDC47Q96A33 CYCSP32-201ENST00000440548 321 ntBASIC3.09□□□□□ -1.91
CCDC47Q96A33 PAXBP1P1-201ENST00000449315 447 ntBASIC3.09□□□□□ -1.91
CCDC47Q96A33 MTATP6P14-201ENST00000455189 673 ntBASIC3.09□□□□□ -1.91
CCDC47Q96A33 AL049829.1-201ENST00000465411 156 ntBASIC3.09□□□□□ -1.91
CCDC47Q96A33 AC010374.2-201ENST00000512933 535 ntBASIC3.09□□□□□ -1.91
CCDC47Q96A33 AC091826.1-201ENST00000514065 313 ntBASIC3.09□□□□□ -1.91
CCDC47Q96A33 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.09□□□□□ -1.91
CCDC47Q96A33 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.09□□□□□ -1.91
CCDC47Q96A33 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
CCDC47Q96A33 MIR4325-201ENST00000583049 90 ntBASIC3.09□□□□□ -1.91
CCDC47Q96A33 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC47Q96A33 AC002545.1-201ENST00000592511 181 ntBASIC3.09□□□□□ -1.91
CCDC47Q96A33 AL355877.2-201ENST00000603670 358 ntBASIC3.09□□□□□ -1.91
CCDC47Q96A33 AC005046.1-201ENST00000608515 625 ntBASIC3.09□□□□□ -1.91
CCDC47Q96A33 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
CCDC47Q96A33 AC010133.1-201ENST00000615809 842 ntBASIC3.09□□□□□ -1.91
CCDC47Q96A33 ATP5A1P2-202ENST00000616464 443 ntBASIC3.09□□□□□ -1.91
CCDC47Q96A33 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC47Q96A33 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC47Q96A33 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms