Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.05□□□□□ -2.08
RTL9Q8NET4 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.05□□□□□ -2.08
RTL9Q8NET4 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC2.05□□□□□ -2.08
RTL9Q8NET4 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.05□□□□□ -2.08
RTL9Q8NET4 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.05□□□□□ -2.08
RTL9Q8NET4 MIR4504-201ENST00000577413 92 ntBASIC2.05□□□□□ -2.08
RTL9Q8NET4 AC092474.3-201ENST00000603022 568 ntBASIC2.05□□□□□ -2.08
RTL9Q8NET4 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.05□□□□□ -2.08
RTL9Q8NET4 AC095031.1-201ENST00000623685 672 ntBASIC2.05□□□□□ -2.08
RTL9Q8NET4 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.05□□□□□ -2.08
RTL9Q8NET4 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
RTL9Q8NET4 ZNF876P-202ENST00000398732 1485 ntBASIC2.04□□□□□ -2.08
RTL9Q8NET4 Y_RNA.118-201ENST00000363300 101 ntBASIC2.04□□□□□ -2.08
RTL9Q8NET4 Y_RNA.355-201ENST00000365462 98 ntBASIC2.04□□□□□ -2.08
RTL9Q8NET4 RNU6-98P-201ENST00000384173 107 ntBASIC2.04□□□□□ -2.08
RTL9Q8NET4 MT-TC-201ENST00000387405 66 ntBASIC2.04□□□□□ -2.08
RTL9Q8NET4 AP002784.2-201ENST00000397300 549 ntBASIC2.04□□□□□ -2.08
RTL9Q8NET4 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RTL9Q8NET4 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.04□□□□□ -2.08
RTL9Q8NET4 Z73417.1-201ENST00000447373 778 ntBASIC2.04□□□□□ -2.08
RTL9Q8NET4 AC078857.1-201ENST00000469870 667 ntBASIC2.04□□□□□ -2.08
RTL9Q8NET4 AC079203.1-201ENST00000487972 404 ntBASIC2.04□□□□□ -2.08
RTL9Q8NET4 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.04□□□□□ -2.08
RTL9Q8NET4 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC2.04□□□□□ -2.08
RTL9Q8NET4 TRAV28-201ENST00000557548 323 ntBASIC2.04□□□□□ -2.08
RTL9Q8NET4 AP001542.2-201ENST00000593141 364 ntBASIC2.04□□□□□ -2.08
RTL9Q8NET4 uc_338.5-201ENST00000611839 155 ntBASIC2.04□□□□□ -2.08
RTL9Q8NET4 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.04□□□□□ -2.08
RTL9Q8NET4 SNORA25.9-201ENST00000365087 128 ntBASIC2.03□□□□□ -2.08
RTL9Q8NET4 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
RTL9Q8NET4 SFR1P1-201ENST00000403720 688 ntBASIC2.03□□□□□ -2.08
RTL9Q8NET4 MIR1303-201ENST00000408625 86 ntBASIC2.03□□□□□ -2.08
RTL9Q8NET4 MTCO3P12-201ENST00000416718 547 ntBASIC2.03□□□□□ -2.08
RTL9Q8NET4 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.03□□□□□ -2.08
RTL9Q8NET4 HMGN2P19-201ENST00000425149 265 ntBASIC2.03□□□□□ -2.08
RTL9Q8NET4 AC092473.1-201ENST00000441098 221 ntBASIC2.03□□□□□ -2.08
RTL9Q8NET4 BNIP3P2-201ENST00000441221 577 ntBASIC2.03□□□□□ -2.08
RTL9Q8NET4 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.03□□□□□ -2.08
RTL9Q8NET4 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.03□□□□□ -2.08
RTL9Q8NET4 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.03□□□□□ -2.08
RTL9Q8NET4 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.03□□□□□ -2.08
RTL9Q8NET4 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.03□□□□□ -2.08
RTL9Q8NET4 LY96-202ENST00000518893 430 ntTSL 3 BASIC2.03□□□□□ -2.08
RTL9Q8NET4 OR5AQ1P-201ENST00000527596 927 ntBASIC2.03□□□□□ -2.08
RTL9Q8NET4 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.03□□□□□ -2.08
RTL9Q8NET4 AC024614.2-201ENST00000577584 372 ntBASIC2.03□□□□□ -2.08
RTL9Q8NET4 BX248123.2-201ENST00000606318 124 ntBASIC2.03□□□□□ -2.08
RTL9Q8NET4 AC110792.4-201ENST00000609843 298 ntBASIC2.03□□□□□ -2.08
RTL9Q8NET4 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
RTL9Q8NET4 AL589994.2-201ENST00000621124 579 ntBASIC2.03□□□□□ -2.08
RTL9Q8NET4 uc_338.20-201ENST00000621563 178 ntBASIC2.03□□□□□ -2.08
RTL9Q8NET4 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.03□□□□□ -2.08
RTL9Q8NET4 MTND4P23-201ENST00000447723 1363 ntBASIC2.03□□□□□ -2.08
RTL9Q8NET4 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
RTL9Q8NET4 SNORA1.3-201ENST00000384676 136 ntBASIC2.02□□□□□ -2.09
RTL9Q8NET4 MCTS2P-201ENST00000394552 546 ntBASIC2.02□□□□□ -2.09
RTL9Q8NET4 RPS4XP3-201ENST00000398541 413 ntBASIC2.02□□□□□ -2.09
RTL9Q8NET4 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC2.02□□□□□ -2.09
RTL9Q8NET4 UBE2FP3-201ENST00000436366 524 ntBASIC2.02□□□□□ -2.09
RTL9Q8NET4 AL451074.3-201ENST00000437709 472 ntBASIC2.02□□□□□ -2.09
RTL9Q8NET4 USP9YP10-201ENST00000454868 628 ntBASIC2.02□□□□□ -2.09
RTL9Q8NET4 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
RTL9Q8NET4 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
RTL9Q8NET4 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC2.02□□□□□ -2.09
RTL9Q8NET4 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.02□□□□□ -2.09
RTL9Q8NET4 MTCO1P40-201ENST00000574371 625 ntBASIC2.02□□□□□ -2.09
RTL9Q8NET4 AC135178.6-201ENST00000605314 398 ntBASIC2.02□□□□□ -2.09
RTL9Q8NET4 AL512598.1-201ENST00000610158 273 ntBASIC2.02□□□□□ -2.09
RTL9Q8NET4 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
RTL9Q8NET4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.02□□□□□ -2.09
RTL9Q8NET4 AC004520.1-201ENST00000608362 1413 ntBASIC2.02□□□□□ -2.09
RTL9Q8NET4 RNU6-374P-201ENST00000364146 108 ntBASIC2.01□□□□□ -2.09
RTL9Q8NET4 Y_RNA.796-201ENST00000364268 102 ntBASIC2.01□□□□□ -2.09
RTL9Q8NET4 Y_RNA.269-201ENST00000364685 89 ntBASIC2.01□□□□□ -2.09
RTL9Q8NET4 Y_RNA.799-201ENST00000364992 102 ntBASIC2.01□□□□□ -2.09
RTL9Q8NET4 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.01□□□□□ -2.09
RTL9Q8NET4 BX510359.4-201ENST00000423750 193 ntBASIC2.01□□□□□ -2.09
RTL9Q8NET4 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.01□□□□□ -2.09
RTL9Q8NET4 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
RTL9Q8NET4 GPM6BP3-201ENST00000442797 145 ntBASIC2.01□□□□□ -2.09
RTL9Q8NET4 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.01□□□□□ -2.09
RTL9Q8NET4 BX322784.1-201ENST00000455793 1077 ntBASIC2.01□□□□□ -2.09
RTL9Q8NET4 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC2.01□□□□□ -2.09
RTL9Q8NET4 AMD1P1-201ENST00000457220 922 ntBASIC2.01□□□□□ -2.09
RTL9Q8NET4 MTCO1P42-201ENST00000457379 726 ntBASIC2.01□□□□□ -2.09
RTL9Q8NET4 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.01□□□□□ -2.09
RTL9Q8NET4 HMGN1P8-201ENST00000463578 288 ntBASIC2.01□□□□□ -2.09
RTL9Q8NET4 AC069528.1-202ENST00000482888 637 ntBASIC2.01□□□□□ -2.09
RTL9Q8NET4 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC2.01□□□□□ -2.09
RTL9Q8NET4 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.01□□□□□ -2.09
RTL9Q8NET4 AC087272.1-201ENST00000523624 533 ntBASIC2.01□□□□□ -2.09
RTL9Q8NET4 ANP32BP3-201ENST00000559213 706 ntBASIC2.01□□□□□ -2.09
RTL9Q8NET4 AC087481.2-201ENST00000565492 330 ntBASIC2.01□□□□□ -2.09
RTL9Q8NET4 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
RTL9Q8NET4 AC103987.3-201ENST00000582071 292 ntBASIC2.01□□□□□ -2.09
RTL9Q8NET4 AC073111.2-201ENST00000605657 1075 ntBASIC2.01□□□□□ -2.09
RTL9Q8NET4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.01□□□□□ -2.09
RTL9Q8NET4 AC090740.1-201ENST00000623193 2262 ntBASIC2.01□□□□□ -2.09
RTL9Q8NET4 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
RTL9Q8NET4 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms