Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
CCDC112Q8NEF3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CCDC112Q8NEF3 HMGB1P5-201ENST00000255320 642 ntBASIC2.24□□□□□ -2.05
CCDC112Q8NEF3 RNA5SP432-201ENST00000362480 116 ntBASIC2.24□□□□□ -2.05
CCDC112Q8NEF3 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CCDC112Q8NEF3 RNU6-883P-201ENST00000384597 107 ntBASIC2.24□□□□□ -2.05
CCDC112Q8NEF3 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.24□□□□□ -2.05
CCDC112Q8NEF3 OR51A3P-201ENST00000413596 924 ntBASIC2.24□□□□□ -2.05
CCDC112Q8NEF3 TRIM60P5Y-201ENST00000413946 574 ntBASIC2.24□□□□□ -2.05
CCDC112Q8NEF3 PTP4A1P7-201ENST00000423476 514 ntBASIC2.24□□□□□ -2.05
CCDC112Q8NEF3 AC090774.1-201ENST00000435925 246 ntBASIC2.24□□□□□ -2.05
CCDC112Q8NEF3 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC112Q8NEF3 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC112Q8NEF3 USP9YP8-201ENST00000441913 500 ntBASIC2.24□□□□□ -2.05
CCDC112Q8NEF3 RPS15AP27-201ENST00000449183 343 ntBASIC2.24□□□□□ -2.05
CCDC112Q8NEF3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.24□□□□□ -2.05
CCDC112Q8NEF3 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CCDC112Q8NEF3 AC092155.2-201ENST00000454675 477 ntBASIC2.24□□□□□ -2.05
CCDC112Q8NEF3 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC112Q8NEF3 RNU6-775P-201ENST00000459318 96 ntBASIC2.24□□□□□ -2.05
CCDC112Q8NEF3 AL135752.1-201ENST00000479477 471 ntBASIC2.24□□□□□ -2.05
CCDC112Q8NEF3 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.24□□□□□ -2.05
CCDC112Q8NEF3 AC008427.1-201ENST00000503102 655 ntBASIC2.24□□□□□ -2.05
CCDC112Q8NEF3 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC112Q8NEF3 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC112Q8NEF3 NDUFS5P6-201ENST00000529136 295 ntBASIC2.24□□□□□ -2.05
CCDC112Q8NEF3 RANP3-201ENST00000530970 276 ntBASIC2.24□□□□□ -2.05
CCDC112Q8NEF3 AP000916.1-201ENST00000533869 835 ntBASIC2.24□□□□□ -2.05
CCDC112Q8NEF3 SNRPGP18-201ENST00000553000 214 ntBASIC2.24□□□□□ -2.05
CCDC112Q8NEF3 AC104229.1-201ENST00000561364 255 ntBASIC2.24□□□□□ -2.05
CCDC112Q8NEF3 AC009127.3-201ENST00000570531 403 ntBASIC2.24□□□□□ -2.05
CCDC112Q8NEF3 MIR4524B-201ENST00000581569 115 ntBASIC2.24□□□□□ -2.05
CCDC112Q8NEF3 AC103710.4-201ENST00000609301 899 ntBASIC2.24□□□□□ -2.05
CCDC112Q8NEF3 RMST_10.1-201ENST00000616309 154 ntBASIC2.24□□□□□ -2.05
CCDC112Q8NEF3 AC110994.2-201ENST00000635481 492 ntBASIC2.24□□□□□ -2.05
CCDC112Q8NEF3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.24□□□□□ -2.05
CCDC112Q8NEF3 CENPCP1-201ENST00000533085 2578 ntBASIC2.24□□□□□ -2.05
CCDC112Q8NEF3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.24□□□□□ -2.05
CCDC112Q8NEF3 TPTE2P4-201ENST00000258589 1605 ntBASIC2.24□□□□□ -2.05
CCDC112Q8NEF3 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.24□□□□□ -2.05
CCDC112Q8NEF3 KPNA2P1-201ENST00000458289 1591 ntBASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 NUP58P1-201ENST00000502546 1738 ntBASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 AC008568.2-201ENST00000623862 2313 ntBASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 SNORD56.4-201ENST00000363883 71 ntBASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 RNA5SP489-201ENST00000410986 109 ntBASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 AL030996.1-201ENST00000411430 235 ntBASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 RPL27AP8-201ENST00000424277 446 ntBASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 VN1R42P-201ENST00000424651 344 ntBASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 RNFT1P2-201ENST00000443064 757 ntBASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 snoU109.4-201ENST00000458953 143 ntBASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 AC107626.1-201ENST00000471084 183 ntBASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 MTCO2P9-201ENST00000503214 694 ntBASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 AC096571.1-202ENST00000506634 735 ntBASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 NDUFB4P2-201ENST00000509515 391 ntBASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 RNU6-237P-201ENST00000515985 71 ntBASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 AC124293.1-201ENST00000530034 493 ntBASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 HMGB1P14-201ENST00000557424 591 ntBASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 AL356280.1-201ENST00000603614 379 ntBASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 AC098826.3-201ENST00000603823 466 ntBASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 AC010738.1-201ENST00000604970 987 ntBASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 AC120053.1-201ENST00000607706 736 ntBASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 OR10AB1P-201ENST00000609613 938 ntBASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 AC006213.5-201ENST00000619673 288 ntBASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 AC091925.2-201ENST00000625059 256 ntBASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 AC104454.1-201ENST00000421341 1401 ntBASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CCDC112Q8NEF3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CCDC112Q8NEF3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
CCDC112Q8NEF3 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.22□□□□□ -2.05
CCDC112Q8NEF3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.22□□□□□ -2.05
CCDC112Q8NEF3 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC112Q8NEF3 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC112Q8NEF3 AL358075.3-201ENST00000426289 226 ntBASIC2.22□□□□□ -2.05
CCDC112Q8NEF3 AL451074.3-201ENST00000437709 472 ntBASIC2.22□□□□□ -2.05
CCDC112Q8NEF3 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CCDC112Q8NEF3 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.22□□□□□ -2.05
CCDC112Q8NEF3 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC112Q8NEF3 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC112Q8NEF3 RPL30P9-201ENST00000465586 330 ntBASIC2.22□□□□□ -2.05
CCDC112Q8NEF3 RPS27P21-201ENST00000486977 252 ntBASIC2.22□□□□□ -2.05
CCDC112Q8NEF3 AC011352.3-201ENST00000505162 593 ntBASIC2.22□□□□□ -2.05
CCDC112Q8NEF3 AC104090.1-201ENST00000506341 1171 ntBASIC2.22□□□□□ -2.05
CCDC112Q8NEF3 MIR514B-201ENST00000516774 80 ntBASIC2.22□□□□□ -2.05
CCDC112Q8NEF3 HSPE1P18-201ENST00000517602 280 ntBASIC2.22□□□□□ -2.05
CCDC112Q8NEF3 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC112Q8NEF3 AC068339.2-201ENST00000534395 618 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms