Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
CCDC83Q8IWF9 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 AL365361.1-201ENST00000566942 3481 ntBASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 SNORD113-6-201ENST00000363345 75 ntBASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 RNU6-7-201ENST00000364784 107 ntBASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 RNU6-8-201ENST00000365467 107 ntBASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 MIR320C1-201ENST00000408566 88 ntBASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 AC112220.1-201ENST00000434628 355 ntBASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 AL590664.1-201ENST00000448065 339 ntBASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 RPL23AP35-201ENST00000451906 501 ntBASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 AL049714.1-201ENST00000466686 347 ntBASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 AC090525.1-201ENST00000479116 478 ntBASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 HSPE1P6-201ENST00000479457 291 ntBASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 AC147055.4-201ENST00000504399 745 ntBASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 AC110760.3-202ENST00000515177 371 ntBASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 SNORA31.1-201ENST00000515993 133 ntBASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 SNORA31.5-201ENST00000516190 133 ntBASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 AL355836.1-201ENST00000555951 870 ntBASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 AL157394.1-201ENST00000562983 1224 ntBASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 AC136618.2-201ENST00000575091 400 ntBASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 AL451007.1-201ENST00000595491 289 ntBASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 AC093732.2-201ENST00000607950 274 ntBASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 AC004067.1-201ENST00000608733 700 ntBASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 AC008443.7-201ENST00000622195 246 ntBASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.21□□□□□ -1.9
CCDC83Q8IWF9 SDAD1P2-201ENST00000441308 2028 ntBASIC3.2□□□□□ -1.9
CCDC83Q8IWF9 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC83Q8IWF9 RNU5A-1-201ENST00000362698 116 ntBASIC3.2□□□□□ -1.9
CCDC83Q8IWF9 U8.9-201ENST00000365667 134 ntBASIC3.2□□□□□ -1.9
CCDC83Q8IWF9 RNU6-637P-201ENST00000384050 107 ntBASIC3.2□□□□□ -1.9
CCDC83Q8IWF9 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.2□□□□□ -1.9
CCDC83Q8IWF9 RNA5SP38-201ENST00000410750 119 ntBASIC3.2□□□□□ -1.9
CCDC83Q8IWF9 MTND1P21-201ENST00000412991 285 ntBASIC3.2□□□□□ -1.9
CCDC83Q8IWF9 RPL7P10-201ENST00000417407 739 ntBASIC3.2□□□□□ -1.9
CCDC83Q8IWF9 ATG3P1-201ENST00000419507 911 ntBASIC3.2□□□□□ -1.9
CCDC83Q8IWF9 AL035407.1-201ENST00000429211 571 ntBASIC3.2□□□□□ -1.9
CCDC83Q8IWF9 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC83Q8IWF9 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC83Q8IWF9 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC83Q8IWF9 COX6CP2-201ENST00000444980 225 ntBASIC3.2□□□□□ -1.9
CCDC83Q8IWF9 AL590639.1-201ENST00000456484 337 ntBASIC3.2□□□□□ -1.9
CCDC83Q8IWF9 RPL30P14-201ENST00000482744 348 ntBASIC3.2□□□□□ -1.9
CCDC83Q8IWF9 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC83Q8IWF9 MTCYBP43-201ENST00000513621 740 ntBASIC3.2□□□□□ -1.9
CCDC83Q8IWF9 AC034159.1-201ENST00000513885 583 ntBASIC3.2□□□□□ -1.9
CCDC83Q8IWF9 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC83Q8IWF9 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC83Q8IWF9 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC3.2□□□□□ -1.9
CCDC83Q8IWF9 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC83Q8IWF9 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC83Q8IWF9 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC83Q8IWF9 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC83Q8IWF9 AF131215.7-201ENST00000602443 707 ntBASIC3.2□□□□□ -1.9
CCDC83Q8IWF9 AC105148.1-201ENST00000604961 409 ntBASIC3.2□□□□□ -1.9
CCDC83Q8IWF9 TUSC7.1-201ENST00000610969 165 ntBASIC3.2□□□□□ -1.9
CCDC83Q8IWF9 AL138880.2-201ENST00000616214 239 ntBASIC3.2□□□□□ -1.9
CCDC83Q8IWF9 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC83Q8IWF9 AC009268.2-201ENST00000621925 457 ntBASIC3.2□□□□□ -1.9
CCDC83Q8IWF9 AL159972.1-201ENST00000625150 448 ntBASIC3.2□□□□□ -1.9
CCDC83Q8IWF9 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC83Q8IWF9 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC83Q8IWF9 AC012321.1-201ENST00000561622 1588 ntBASIC3.2□□□□□ -1.9
CCDC83Q8IWF9 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
CCDC83Q8IWF9 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC83Q8IWF9 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC83Q8IWF9 AL672167.1-206ENST00000356293 943 ntBASIC3.19□□□□□ -1.9
CCDC83Q8IWF9 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CCDC83Q8IWF9 RNU5E-8P-201ENST00000363502 116 ntBASIC3.19□□□□□ -1.9
CCDC83Q8IWF9 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC83Q8IWF9 MTCO1P17-201ENST00000411522 491 ntBASIC3.19□□□□□ -1.9
CCDC83Q8IWF9 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.19□□□□□ -1.9
CCDC83Q8IWF9 COTL1P1-201ENST00000422309 375 ntBASIC3.19□□□□□ -1.9
CCDC83Q8IWF9 AC234781.2-201ENST00000426370 994 ntBASIC3.19□□□□□ -1.9
CCDC83Q8IWF9 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC83Q8IWF9 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC83Q8IWF9 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC83Q8IWF9 UBE2V1P13-201ENST00000436983 439 ntBASIC3.19□□□□□ -1.9
CCDC83Q8IWF9 RPL21P2-201ENST00000440049 481 ntBASIC3.19□□□□□ -1.9
CCDC83Q8IWF9 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC83Q8IWF9 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC83Q8IWF9 AP000542.1-201ENST00000448473 371 ntBASIC3.19□□□□□ -1.9
CCDC83Q8IWF9 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC83Q8IWF9 RPL31P60-201ENST00000478450 367 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms