Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 AC099654.5-201ENST00000636479 350 ntBASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 AC027287.1-201ENST00000553115 1453 ntBASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 RPL7P26-201ENST00000333817 754 ntBASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 Y_RNA.86-201ENST00000363020 111 ntBASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 SNORA7.2-201ENST00000364446 145 ntBASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 U3.11-201ENST00000364476 212 ntBASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 Y_RNA.367-201ENST00000365544 101 ntBASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 MIR513A2-201ENST00000385249 127 ntBASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 MIR670-201ENST00000390142 98 ntBASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 SNORA3C-201ENST00000408792 125 ntBASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 RNU4-78P-201ENST00000410940 126 ntBASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 HMGN1P24-201ENST00000412282 298 ntBASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 AC245054.1-201ENST00000420944 258 ntBASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 AL391219.1-201ENST00000422570 483 ntBASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 RPL21P112-201ENST00000434403 463 ntBASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 RPS20P5-201ENST00000434808 360 ntBASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 AC083863.1-201ENST00000438811 231 ntBASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 UBE2V1P7-201ENST00000446395 340 ntBASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 AC010655.1-201ENST00000449336 292 ntBASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 AC006480.1-201ENST00000449887 378 ntBASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 AC140076.1-201ENST00000449897 361 ntBASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 SNRPGP6-201ENST00000451124 220 ntBASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 RNU7-59P-201ENST00000459101 61 ntBASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 ST13P14-201ENST00000474095 734 ntBASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 AC068305.1-201ENST00000497406 726 ntBASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 PCBP2P3-201ENST00000509726 843 ntBASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 RNA5SP143-201ENST00000516936 115 ntBASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 CR383656.7-201ENST00000548164 174 ntBASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 AC104662.1-201ENST00000604448 511 ntBASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 BNIP3P10-201ENST00000605360 577 ntBASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 AP004289.2-201ENST00000444413 1457 ntBASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
C9orf139Q6ZV77 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 AC006020.1-201ENST00000420179 1854 ntBASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 AL133383.2-201ENST00000622958 2336 ntBASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 RNU6-223P-201ENST00000362830 107 ntBASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 Y_RNA.61-201ENST00000362835 102 ntBASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 RNA5SP399-201ENST00000364003 117 ntBASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 U1.1-201ENST00000384101 164 ntBASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 MIR30B-201ENST00000384850 88 ntBASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 AL354719.1-201ENST00000406535 843 ntBASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 RPL7AP73-201ENST00000413490 353 ntBASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 OR51A5P-201ENST00000415429 942 ntBASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 SDCBPP3-201ENST00000419629 891 ntBASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 MTND4P28-201ENST00000426217 387 ntBASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 MRPS18BP2-201ENST00000434310 759 ntBASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 MTND4LP16-201ENST00000440828 295 ntBASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 AC007967.1-201ENST00000455422 1159 ntBASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 MTND1P11-201ENST00000456661 876 ntBASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 RNU7-63P-201ENST00000459054 62 ntBASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 snoU13.3-201ENST00000459441 104 ntBASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 AC135721.1-201ENST00000497954 479 ntBASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 RNA5SP164-201ENST00000516533 110 ntBASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 TRMT10BP1-201ENST00000519377 943 ntBASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 AC087369.1-201ENST00000520775 996 ntBASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 OR5B19P-201ENST00000531766 928 ntBASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms