Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 AC091965.5-201ENST00000624785 342 ntBASIC2.68□□□□□ -1.98
CKAP4Q07065 PCMTD1P7-201ENST00000634506 357 ntBASIC2.68□□□□□ -1.98
CKAP4Q07065 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
CKAP4Q07065 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
CKAP4Q07065 AL079343.1-201ENST00000572358 1771 ntBASIC2.68□□□□□ -1.98
CKAP4Q07065 AC091564.4-201ENST00000533934 2194 ntBASIC2.68□□□□□ -1.98
CKAP4Q07065 AL513185.3-201ENST00000433335 1300 ntBASIC2.68□□□□□ -1.98
CKAP4Q07065 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.68□□□□□ -1.98
CKAP4Q07065 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.67□□□□□ -1.98
CKAP4Q07065 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.67□□□□□ -1.98
CKAP4Q07065 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CKAP4Q07065 DDX43P2-201ENST00000604753 1354 ntBASIC2.67□□□□□ -1.98
CKAP4Q07065 MIR422A-201ENST00000362286 90 ntBASIC2.67□□□□□ -1.98
CKAP4Q07065 SNORD116-9-201ENST00000384000 95 ntBASIC2.67□□□□□ -1.98
CKAP4Q07065 SNORA51.6-201ENST00000384151 125 ntBASIC2.67□□□□□ -1.98
CKAP4Q07065 SNORA9-201ENST00000384215 133 ntBASIC2.67□□□□□ -1.98
CKAP4Q07065 SNORD116-3-201ENST00000384287 95 ntBASIC2.67□□□□□ -1.98
CKAP4Q07065 RNU6-1226P-201ENST00000384317 107 ntBASIC2.67□□□□□ -1.98
CKAP4Q07065 SNORD116-7-201ENST00000384404 95 ntBASIC2.67□□□□□ -1.98
CKAP4Q07065 SNORD116-5-201ENST00000384462 95 ntBASIC2.67□□□□□ -1.98
CKAP4Q07065 HMGB1P17-201ENST00000403495 628 ntBASIC2.67□□□□□ -1.98
CKAP4Q07065 AC069157.1-201ENST00000421749 137 ntBASIC2.67□□□□□ -1.98
CKAP4Q07065 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.67□□□□□ -1.98
CKAP4Q07065 AL953862.1-201ENST00000423016 168 ntBASIC2.67□□□□□ -1.98
CKAP4Q07065 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.67□□□□□ -1.98
CKAP4Q07065 AC118469.1-201ENST00000442943 488 ntBASIC2.67□□□□□ -1.98
CKAP4Q07065 KATNBL1P3-201ENST00000443475 909 ntBASIC2.67□□□□□ -1.98
CKAP4Q07065 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.67□□□□□ -1.98
CKAP4Q07065 VN1R34P-201ENST00000447387 883 ntBASIC2.67□□□□□ -1.98
CKAP4Q07065 RPL39P6-201ENST00000448289 150 ntBASIC2.67□□□□□ -1.98
CKAP4Q07065 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.67□□□□□ -1.98
CKAP4Q07065 TRBV26-201ENST00000456572 344 ntBASIC2.67□□□□□ -1.98
CKAP4Q07065 RPS29P12-201ENST00000460178 152 ntBASIC2.67□□□□□ -1.98
CKAP4Q07065 SETP11-201ENST00000473027 690 ntBASIC2.67□□□□□ -1.98
CKAP4Q07065 RPS29P26-201ENST00000477483 171 ntBASIC2.67□□□□□ -1.98
CKAP4Q07065 OR4G11P-201ENST00000492842 939 ntBASIC2.67□□□□□ -1.98
CKAP4Q07065 AC104685.1-201ENST00000502445 371 ntBASIC2.67□□□□□ -1.98
CKAP4Q07065 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.67□□□□□ -1.98
CKAP4Q07065 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.67□□□□□ -1.98
CKAP4Q07065 AC093281.2-201ENST00000510153 597 ntBASIC2.67□□□□□ -1.98
CKAP4Q07065 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
CKAP4Q07065 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.67□□□□□ -1.98
CKAP4Q07065 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.67□□□□□ -1.98
CKAP4Q07065 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.67□□□□□ -1.98
CKAP4Q07065 SNORA31.21-201ENST00000517180 77 ntBASIC2.67□□□□□ -1.98
CKAP4Q07065 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.67□□□□□ -1.98
CKAP4Q07065 AL121603.1-201ENST00000553815 142 ntBASIC2.67□□□□□ -1.98
CKAP4Q07065 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.67□□□□□ -1.98
CKAP4Q07065 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CKAP4Q07065 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.67□□□□□ -1.98
CKAP4Q07065 AC011260.1-201ENST00000578420 472 ntBASIC2.67□□□□□ -1.98
CKAP4Q07065 MIR3915-201ENST00000578518 97 ntBASIC2.67□□□□□ -1.98
CKAP4Q07065 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.67□□□□□ -1.98
CKAP4Q07065 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.67□□□□□ -1.98
CKAP4Q07065 AL596327.1-201ENST00000603629 213 ntBASIC2.67□□□□□ -1.98
CKAP4Q07065 AL358072.1-201ENST00000604156 575 ntBASIC2.67□□□□□ -1.98
CKAP4Q07065 AC105129.3-201ENST00000605455 485 ntBASIC2.67□□□□□ -1.98
CKAP4Q07065 AL031667.3-201ENST00000620124 655 ntBASIC2.67□□□□□ -1.98
CKAP4Q07065 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.67□□□□□ -1.98
CKAP4Q07065 AC068137.4-201ENST00000638485 296 ntBASIC2.67□□□□□ -1.98
CKAP4Q07065 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.67□□□□□ -1.98
CKAP4Q07065 MAPK10-266ENST00000641066 6555 ntBASIC2.67□□□□□ -1.98
CKAP4Q07065 OR4G11P-202ENST00000642116 1414 ntBASIC2.67□□□□□ -1.98
CKAP4Q07065 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CKAP4Q07065 AC130650.2-201ENST00000618736 2403 ntBASIC2.66□□□□□ -1.98
CKAP4Q07065 RNA5SP258-201ENST00000362750 119 ntBASIC2.66□□□□□ -1.98
CKAP4Q07065 SNORA38.1-201ENST00000364172 131 ntBASIC2.66□□□□□ -1.98
CKAP4Q07065 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
CKAP4Q07065 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CKAP4Q07065 ARF4P3-201ENST00000397387 509 ntBASIC2.66□□□□□ -1.98
CKAP4Q07065 AL023807.1-201ENST00000407932 359 ntBASIC2.66□□□□□ -1.98
CKAP4Q07065 EEF1A1P41-201ENST00000414667 207 ntBASIC2.66□□□□□ -1.98
CKAP4Q07065 RPL23AP39-201ENST00000415533 405 ntBASIC2.66□□□□□ -1.98
CKAP4Q07065 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.66□□□□□ -1.98
CKAP4Q07065 AL645937.1-202ENST00000421799 937 ntBASIC2.66□□□□□ -1.98
CKAP4Q07065 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.66□□□□□ -1.98
CKAP4Q07065 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.66□□□□□ -1.98
CKAP4Q07065 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.66□□□□□ -1.98
CKAP4Q07065 AC092427.1-201ENST00000439177 601 ntBASIC2.66□□□□□ -1.98
CKAP4Q07065 VN1R10P-201ENST00000447106 875 ntBASIC2.66□□□□□ -1.98
CKAP4Q07065 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.66□□□□□ -1.98
CKAP4Q07065 AC104073.1-201ENST00000451988 151 ntBASIC2.66□□□□□ -1.98
CKAP4Q07065 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.66□□□□□ -1.98
CKAP4Q07065 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.66□□□□□ -1.98
CKAP4Q07065 AC092757.1-201ENST00000467293 467 ntBASIC2.66□□□□□ -1.98
CKAP4Q07065 RPS15AP17-201ENST00000470598 390 ntBASIC2.66□□□□□ -1.98
CKAP4Q07065 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.66□□□□□ -1.98
CKAP4Q07065 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.66□□□□□ -1.98
CKAP4Q07065 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.66□□□□□ -1.98
CKAP4Q07065 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.66□□□□□ -1.98
CKAP4Q07065 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.66□□□□□ -1.98
CKAP4Q07065 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.66□□□□□ -1.98
CKAP4Q07065 HSPE1P20-201ENST00000538133 289 ntBASIC2.66□□□□□ -1.98
CKAP4Q07065 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.66□□□□□ -1.98
CKAP4Q07065 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.66□□□□□ -1.98
CKAP4Q07065 LSM6P2-201ENST00000552208 177 ntBASIC2.66□□□□□ -1.98
CKAP4Q07065 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.66□□□□□ -1.98
CKAP4Q07065 AL391156.1-201ENST00000554965 554 ntBASIC2.66□□□□□ -1.98
CKAP4Q07065 HSPE1P3-201ENST00000559254 309 ntBASIC2.66□□□□□ -1.98
CKAP4Q07065 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 158.7 ms