Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SOX4Q06945 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SOX4Q06945 AL445487.1-201ENST00000415694 1580 ntBASIC4.99□□□□□ -1.61
SOX4Q06945 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.98□□□□□ -1.61
SOX4Q06945 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
SOX4Q06945 HSPA8P4-201ENST00000511877 1920 ntBASIC4.98□□□□□ -1.61
SOX4Q06945 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SOX4Q06945 Y_RNA.117-201ENST00000363294 101 ntBASIC4.98□□□□□ -1.61
SOX4Q06945 Y_RNA.483-201ENST00000384380 101 ntBASIC4.98□□□□□ -1.61
SOX4Q06945 AP000580.1-201ENST00000404439 358 ntBASIC4.98□□□□□ -1.61
SOX4Q06945 ELOCP19-201ENST00000411919 318 ntBASIC4.98□□□□□ -1.61
SOX4Q06945 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.98□□□□□ -1.61
SOX4Q06945 RPS23P10-201ENST00000416185 486 ntBASIC4.98□□□□□ -1.61
SOX4Q06945 RPS15AP40-201ENST00000419621 391 ntBASIC4.98□□□□□ -1.61
SOX4Q06945 RPS12P5-201ENST00000423449 371 ntBASIC4.98□□□□□ -1.61
SOX4Q06945 RPL12P34-201ENST00000424532 479 ntBASIC4.98□□□□□ -1.61
SOX4Q06945 AL591704.1-201ENST00000432574 275 ntBASIC4.98□□□□□ -1.61
SOX4Q06945 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.98□□□□□ -1.61
SOX4Q06945 FTH1P25-201ENST00000447665 469 ntBASIC4.98□□□□□ -1.61
SOX4Q06945 AC133473.1-201ENST00000455173 299 ntBASIC4.98□□□□□ -1.61
SOX4Q06945 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.98□□□□□ -1.61
SOX4Q06945 RPL21P103-201ENST00000479921 488 ntBASIC4.98□□□□□ -1.61
SOX4Q06945 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.98□□□□□ -1.61
SOX4Q06945 RNU6-513P-201ENST00000516104 104 ntBASIC4.98□□□□□ -1.61
SOX4Q06945 RNU6-1023P-201ENST00000516137 106 ntBASIC4.98□□□□□ -1.61
SOX4Q06945 RNU6-406P-201ENST00000516470 107 ntBASIC4.98□□□□□ -1.61
SOX4Q06945 Y_RNA.689-201ENST00000516589 107 ntBASIC4.98□□□□□ -1.61
SOX4Q06945 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.98□□□□□ -1.61
SOX4Q06945 OR5D17P-201ENST00000531492 978 ntBASIC4.98□□□□□ -1.61
SOX4Q06945 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.98□□□□□ -1.61
SOX4Q06945 HMGB1P50-201ENST00000605814 607 ntBASIC4.98□□□□□ -1.61
SOX4Q06945 MIR4272-201ENST00000635924 64 ntBASIC4.98□□□□□ -1.61
SOX4Q06945 U2.22-201ENST00000636441 106 ntBASIC4.98□□□□□ -1.61
SOX4Q06945 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SOX4Q06945 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SOX4Q06945 AL022311.1-201ENST00000623726 19416 ntBASIC4.98□□□□□ -1.61
SOX4Q06945 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SOX4Q06945 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.98□□□□□ -1.61
SOX4Q06945 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
SOX4Q06945 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
SOX4Q06945 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.98□□□□□ -1.61
SOX4Q06945 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SOX4Q06945 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
SOX4Q06945 RAD17P1-201ENST00000418130 2042 ntBASIC4.97□□□□□ -1.61
SOX4Q06945 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SOX4Q06945 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SOX4Q06945 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
SOX4Q06945 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SOX4Q06945 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SOX4Q06945 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SOX4Q06945 Y_RNA.14-201ENST00000362415 103 ntBASIC4.97□□□□□ -1.61
SOX4Q06945 RNA5SP447-201ENST00000363749 119 ntBASIC4.97□□□□□ -1.61
SOX4Q06945 Y_RNA.214-201ENST00000364201 112 ntBASIC4.97□□□□□ -1.61
SOX4Q06945 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
SOX4Q06945 MIR548M-201ENST00000408260 86 ntBASIC4.97□□□□□ -1.61
SOX4Q06945 RNU2-38P-201ENST00000410856 79 ntBASIC4.97□□□□□ -1.61
SOX4Q06945 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.97□□□□□ -1.61
SOX4Q06945 AL158071.1-201ENST00000430315 461 ntBASIC4.97□□□□□ -1.61
SOX4Q06945 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.97□□□□□ -1.61
SOX4Q06945 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.97□□□□□ -1.61
SOX4Q06945 AL589765.3-201ENST00000446084 462 ntBASIC4.97□□□□□ -1.61
SOX4Q06945 CHEK2P4-201ENST00000450340 246 ntBASIC4.97□□□□□ -1.61
SOX4Q06945 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.97□□□□□ -1.61
SOX4Q06945 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.97□□□□□ -1.61
SOX4Q06945 RNU7-187P-201ENST00000458985 68 ntBASIC4.97□□□□□ -1.61
SOX4Q06945 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.97□□□□□ -1.61
SOX4Q06945 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.97□□□□□ -1.61
SOX4Q06945 AC040926.1-201ENST00000530195 238 ntBASIC4.97□□□□□ -1.61
SOX4Q06945 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.97□□□□□ -1.61
SOX4Q06945 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.97□□□□□ -1.61
SOX4Q06945 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.97□□□□□ -1.61
SOX4Q06945 AC110743.1-201ENST00000584870 478 ntBASIC4.97□□□□□ -1.61
SOX4Q06945 HMGN2P28-201ENST00000606102 262 ntBASIC4.97□□□□□ -1.61
SOX4Q06945 AC098479.1-201ENST00000609225 154 ntBASIC4.97□□□□□ -1.61
SOX4Q06945 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.97□□□□□ -1.61
SOX4Q06945 AC083809.1-201ENST00000615051 472 ntBASIC4.97□□□□□ -1.61
SOX4Q06945 AC015914.2-201ENST00000618167 288 ntBASIC4.97□□□□□ -1.61
SOX4Q06945 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SOX4Q06945 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SOX4Q06945 OR56B2P-202ENST00000641377 2453 ntBASIC4.97□□□□□ -1.61
SOX4Q06945 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SOX4Q06945 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SOX4Q06945 AC108751.5-201ENST00000492880 1336 ntBASIC4.97□□□□□ -1.61
SOX4Q06945 AL136164.3-201ENST00000624429 3978 ntBASIC4.97□□□□□ -1.61
SOX4Q06945 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SOX4Q06945 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SOX4Q06945 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.96□□□□□ -1.61
SOX4Q06945 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
SOX4Q06945 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SOX4Q06945 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SOX4Q06945 ZNF72P-201ENST00000425869 1908 ntBASIC4.96□□□□□ -1.62
SOX4Q06945 Y_RNA.151-201ENST00000363566 112 ntBASIC4.96□□□□□ -1.62
SOX4Q06945 Y_RNA.276-201ENST00000364732 109 ntBASIC4.96□□□□□ -1.62
SOX4Q06945 SNORA71.2-201ENST00000364941 134 ntBASIC4.96□□□□□ -1.62
SOX4Q06945 Y_RNA.376-201ENST00000365638 108 ntBASIC4.96□□□□□ -1.62
SOX4Q06945 Y_RNA.477-201ENST00000384352 108 ntBASIC4.96□□□□□ -1.62
SOX4Q06945 MIR517A-201ENST00000385001 87 ntBASIC4.96□□□□□ -1.62
SOX4Q06945 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.96□□□□□ -1.62
SOX4Q06945 RPL7AP25-201ENST00000423357 805 ntBASIC4.96□□□□□ -1.62
SOX4Q06945 UBE2V1P4-201ENST00000425374 344 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms