Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
SCN7AQ01118 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.67□□□□□ -2.14
SCN7AQ01118 TRAPPC2P4-201ENST00000421750 331 ntBASIC1.67□□□□□ -2.14
SCN7AQ01118 LAMTOR3P1-201ENST00000428620 370 ntBASIC1.67□□□□□ -2.14
SCN7AQ01118 SNRPGP13-201ENST00000442212 177 ntBASIC1.67□□□□□ -2.14
SCN7AQ01118 UBBP3-201ENST00000445497 241 ntBASIC1.67□□□□□ -2.14
SCN7AQ01118 AC034222.1-201ENST00000494052 532 ntBASIC1.67□□□□□ -2.14
SCN7AQ01118 RNU6-1223P-201ENST00000517124 104 ntBASIC1.67□□□□□ -2.14
SCN7AQ01118 AC011604.1-201ENST00000545978 196 ntBASIC1.67□□□□□ -2.14
SCN7AQ01118 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.67□□□□□ -2.14
SCN7AQ01118 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.67□□□□□ -2.14
SCN7AQ01118 AP000676.4-201ENST00000624659 623 ntBASIC1.67□□□□□ -2.14
SCN7AQ01118 AL133216.2-202ENST00000634512 349 ntBASIC1.67□□□□□ -2.14
SCN7AQ01118 RNU1-22P-201ENST00000363334 158 ntBASIC1.66□□□□□ -2.14
SCN7AQ01118 RNY1-201ENST00000364228 113 ntBASIC1.66□□□□□ -2.14
SCN7AQ01118 SNORA6-201ENST00000384033 151 ntBASIC1.66□□□□□ -2.14
SCN7AQ01118 SNORA40.6-201ENST00000391153 128 ntBASIC1.66□□□□□ -2.14
SCN7AQ01118 AL591034.1-201ENST00000407447 340 ntBASIC1.66□□□□□ -2.14
SCN7AQ01118 U3.40-201ENST00000408706 208 ntBASIC1.66□□□□□ -2.14
SCN7AQ01118 AL445669.1-201ENST00000426743 755 ntBASIC1.66□□□□□ -2.14
SCN7AQ01118 AC096632.1-201ENST00000427395 310 ntBASIC1.66□□□□□ -2.14
SCN7AQ01118 RPS6P15-201ENST00000431996 751 ntBASIC1.66□□□□□ -2.14
SCN7AQ01118 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC1.66□□□□□ -2.14
SCN7AQ01118 AC092991.1-201ENST00000477176 376 ntBASIC1.66□□□□□ -2.14
SCN7AQ01118 MTCO3P35-201ENST00000485582 781 ntBASIC1.66□□□□□ -2.14
SCN7AQ01118 RNA5SP61-201ENST00000516453 100 ntBASIC1.66□□□□□ -2.14
SCN7AQ01118 RPPH1-2P-201ENST00000516688 293 ntBASIC1.66□□□□□ -2.14
SCN7AQ01118 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.66□□□□□ -2.14
SCN7AQ01118 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.66□□□□□ -2.14
SCN7AQ01118 AC068338.1-201ENST00000565567 176 ntBASIC1.66□□□□□ -2.14
SCN7AQ01118 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.66□□□□□ -2.14
SCN7AQ01118 VN1R81P-201ENST00000602085 372 ntBASIC1.66□□□□□ -2.14
SCN7AQ01118 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC1.66□□□□□ -2.14
SCN7AQ01118 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC1.66□□□□□ -2.14
SCN7AQ01118 AC005296.1-201ENST00000616145 209 ntBASIC1.66□□□□□ -2.14
SCN7AQ01118 AC116563.2-201ENST00000624751 535 ntBASIC1.66□□□□□ -2.14
SCN7AQ01118 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.66□□□□□ -2.14
SCN7AQ01118 AC138915.1-201ENST00000565427 1685 ntBASIC1.66□□□□□ -2.14
SCN7AQ01118 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
SCN7AQ01118 ZNF734P-201ENST00000419494 1534 ntBASIC1.65□□□□□ -2.14
SCN7AQ01118 AC073055.1-201ENST00000456901 1621 ntBASIC1.65□□□□□ -2.14
SCN7AQ01118 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
SCN7AQ01118 RNU6-1080P-201ENST00000383982 107 ntBASIC1.65□□□□□ -2.15
SCN7AQ01118 SNORA81-201ENST00000408493 178 ntBASIC1.65□□□□□ -2.15
SCN7AQ01118 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.65□□□□□ -2.15
SCN7AQ01118 TRIM60P3Y-201ENST00000432201 673 ntBASIC1.65□□□□□ -2.15
SCN7AQ01118 COX6CP12-201ENST00000446748 202 ntBASIC1.65□□□□□ -2.15
SCN7AQ01118 AC092155.2-201ENST00000454675 477 ntBASIC1.65□□□□□ -2.15
SCN7AQ01118 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC1.65□□□□□ -2.15
SCN7AQ01118 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.65□□□□□ -2.15
SCN7AQ01118 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SCN7AQ01118 AC006390.1-201ENST00000508068 283 ntBASIC1.65□□□□□ -2.15
SCN7AQ01118 AC008526.1-201ENST00000509149 338 ntBASIC1.65□□□□□ -2.15
SCN7AQ01118 AC087373.1-201ENST00000524920 491 ntBASIC1.65□□□□□ -2.15
SCN7AQ01118 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC1.65□□□□□ -2.15
SCN7AQ01118 MIR151B-201ENST00000584249 96 ntBASIC1.65□□□□□ -2.15
SCN7AQ01118 GLUD1P4-201ENST00000590914 418 ntBASIC1.65□□□□□ -2.15
SCN7AQ01118 MIR203B-201ENST00000636080 86 ntBASIC1.65□□□□□ -2.15
SCN7AQ01118 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SCN7AQ01118 RNU6-317P-201ENST00000384031 107 ntBASIC1.64□□□□□ -2.15
SCN7AQ01118 RNU6-629P-201ENST00000384061 103 ntBASIC1.64□□□□□ -2.15
SCN7AQ01118 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.64□□□□□ -2.15
SCN7AQ01118 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.64□□□□□ -2.15
SCN7AQ01118 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.64□□□□□ -2.15
SCN7AQ01118 BZW1P2-201ENST00000473537 826 ntBASIC1.64□□□□□ -2.15
SCN7AQ01118 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.64□□□□□ -2.15
SCN7AQ01118 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.64□□□□□ -2.15
SCN7AQ01118 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.64□□□□□ -2.15
SCN7AQ01118 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC1.64□□□□□ -2.15
SCN7AQ01118 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.64□□□□□ -2.15
SCN7AQ01118 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.64□□□□□ -2.15
SCN7AQ01118 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1.64□□□□□ -2.15
SCN7AQ01118 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.64□□□□□ -2.15
SCN7AQ01118 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.64□□□□□ -2.15
SCN7AQ01118 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.64□□□□□ -2.15
SCN7AQ01118 CENPCP1-201ENST00000533085 2578 ntBASIC1.64□□□□□ -2.15
SCN7AQ01118 RNU6-532P-201ENST00000384318 107 ntBASIC1.64□□□□□ -2.15
SCN7AQ01118 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.64□□□□□ -2.15
SCN7AQ01118 ATP5J2P3-201ENST00000451550 258 ntBASIC1.64□□□□□ -2.15
SCN7AQ01118 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.64□□□□□ -2.15
SCN7AQ01118 FO393415.2-201ENST00000480085 343 ntBASIC1.64□□□□□ -2.15
SCN7AQ01118 SUB1P1-201ENST00000524415 382 ntBASIC1.64□□□□□ -2.15
SCN7AQ01118 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.64□□□□□ -2.15
SCN7AQ01118 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC1.64□□□□□ -2.15
SCN7AQ01118 AC090897.2-201ENST00000581715 130 ntBASIC1.64□□□□□ -2.15
SCN7AQ01118 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC1.64□□□□□ -2.15
SCN7AQ01118 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.64□□□□□ -2.15
SCN7AQ01118 uc_338.9-201ENST00000617424 182 ntBASIC1.64□□□□□ -2.15
SCN7AQ01118 AC008121.3-201ENST00000618726 433 ntBASIC1.64□□□□□ -2.15
SCN7AQ01118 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.63□□□□□ -2.15
SCN7AQ01118 AP000560.1-201ENST00000624150 1937 ntBASIC1.63□□□□□ -2.15
SCN7AQ01118 RNU6-342P-201ENST00000384521 104 ntBASIC1.63□□□□□ -2.15
SCN7AQ01118 RPL26P37-201ENST00000411983 438 ntBASIC1.63□□□□□ -2.15
SCN7AQ01118 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.63□□□□□ -2.15
SCN7AQ01118 UBE2V1P13-201ENST00000436983 439 ntBASIC1.63□□□□□ -2.15
SCN7AQ01118 PGBD4P3-201ENST00000440731 581 ntBASIC1.63□□□□□ -2.15
SCN7AQ01118 CALM1P1-201ENST00000442082 433 ntBASIC1.63□□□□□ -2.15
SCN7AQ01118 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.63□□□□□ -2.15
SCN7AQ01118 AL121871.1-201ENST00000443413 436 ntBASIC1.63□□□□□ -2.15
SCN7AQ01118 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms