Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AP001429.1-201ENST00000602568 530 ntBASIC2.41□□□□□ -2.02
VSX2P58304 AC007621.1-201ENST00000604544 437 ntBASIC2.41□□□□□ -2.02
VSX2P58304 AC080013.4-201ENST00000607624 649 ntBASIC2.41□□□□□ -2.02
VSX2P58304 AC140725.3-201ENST00000616193 880 ntBASIC2.41□□□□□ -2.02
VSX2P58304 AL121895.2-201ENST00000619558 447 ntBASIC2.41□□□□□ -2.02
VSX2P58304 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.41□□□□□ -2.02
VSX2P58304 AC011330.2-201ENST00000621680 635 ntBASIC2.41□□□□□ -2.02
VSX2P58304 AC103798.2-201ENST00000624292 632 ntBASIC2.41□□□□□ -2.02
VSX2P58304 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.41□□□□□ -2.02
VSX2P58304 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.41□□□□□ -2.02
VSX2P58304 FO624990.1-201ENST00000636373 85 ntBASIC2.41□□□□□ -2.02
VSX2P58304 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
VSX2P58304 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
VSX2P58304 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
VSX2P58304 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
VSX2P58304 RNU6-28P-201ENST00000362378 107 ntBASIC2.4□□□□□ -2.03
VSX2P58304 HMGB1P17-201ENST00000403495 628 ntBASIC2.4□□□□□ -2.03
VSX2P58304 AL590084.1-201ENST00000407885 387 ntBASIC2.4□□□□□ -2.03
VSX2P58304 AL513477.1-202ENST00000417061 214 ntBASIC2.4□□□□□ -2.03
VSX2P58304 TMEM167AP1-201ENST00000423409 219 ntBASIC2.4□□□□□ -2.03
VSX2P58304 OR4K11P-201ENST00000431829 904 ntBASIC2.4□□□□□ -2.03
VSX2P58304 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.4□□□□□ -2.03
VSX2P58304 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
VSX2P58304 AL049714.1-201ENST00000466686 347 ntBASIC2.4□□□□□ -2.03
VSX2P58304 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.4□□□□□ -2.03
VSX2P58304 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.4□□□□□ -2.03
VSX2P58304 RNU6-928P-201ENST00000516876 104 ntBASIC2.4□□□□□ -2.03
VSX2P58304 RN7SKP40-201ENST00000517211 242 ntBASIC2.4□□□□□ -2.03
VSX2P58304 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.4□□□□□ -2.03
VSX2P58304 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.4□□□□□ -2.03
VSX2P58304 AC123904.3-201ENST00000547218 814 ntBASIC2.4□□□□□ -2.03
VSX2P58304 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
VSX2P58304 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.4□□□□□ -2.03
VSX2P58304 AC027176.1-201ENST00000560204 514 ntBASIC2.4□□□□□ -2.03
VSX2P58304 AC010620.2-201ENST00000600135 313 ntBASIC2.4□□□□□ -2.03
VSX2P58304 AL160237.3-201ENST00000604114 1013 ntBASIC2.4□□□□□ -2.03
VSX2P58304 AC069431.2-201ENST00000604149 1099 ntBASIC2.4□□□□□ -2.03
VSX2P58304 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.4□□□□□ -2.03
VSX2P58304 AL161734.1-201ENST00000609720 557 ntBASIC2.4□□□□□ -2.03
VSX2P58304 AL138880.2-201ENST00000616214 239 ntBASIC2.4□□□□□ -2.03
VSX2P58304 U4.3-201ENST00000621047 82 ntBASIC2.4□□□□□ -2.03
VSX2P58304 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.4□□□□□ -2.03
VSX2P58304 AC243829.7-201ENST00000633081 225 ntBASIC2.4□□□□□ -2.03
VSX2P58304 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.4□□□□□ -2.03
VSX2P58304 AC010149.2-201ENST00000637608 315 ntBASIC2.4□□□□□ -2.03
VSX2P58304 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.4□□□□□ -2.03
VSX2P58304 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
VSX2P58304 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.4□□□□□ -2.03
VSX2P58304 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
VSX2P58304 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.39□□□□□ -2.03
VSX2P58304 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
VSX2P58304 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.39□□□□□ -2.03
VSX2P58304 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.39□□□□□ -2.03
VSX2P58304 SNORD21-201ENST00000383953 95 ntBASIC2.39□□□□□ -2.03
VSX2P58304 RNU6-76P-201ENST00000384060 104 ntBASIC2.39□□□□□ -2.03
VSX2P58304 RNU6-1122P-201ENST00000384449 107 ntBASIC2.39□□□□□ -2.03
VSX2P58304 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
VSX2P58304 ANAPC10P1-201ENST00000395991 556 ntBASIC2.39□□□□□ -2.03
VSX2P58304 MTCO2P5-201ENST00000422621 426 ntBASIC2.39□□□□□ -2.03
VSX2P58304 RPL27AP8-201ENST00000424277 446 ntBASIC2.39□□□□□ -2.03
VSX2P58304 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
VSX2P58304 EEF1B2P7-201ENST00000451177 676 ntBASIC2.39□□□□□ -2.03
VSX2P58304 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.39□□□□□ -2.03
VSX2P58304 SETP11-201ENST00000473027 690 ntBASIC2.39□□□□□ -2.03
VSX2P58304 RPL23AP45-201ENST00000476406 468 ntBASIC2.39□□□□□ -2.03
VSX2P58304 AC114981.1-201ENST00000503897 678 ntBASIC2.39□□□□□ -2.03
VSX2P58304 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
VSX2P58304 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.39□□□□□ -2.03
VSX2P58304 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.39□□□□□ -2.03
VSX2P58304 TTC39CP1-201ENST00000512513 755 ntBASIC2.39□□□□□ -2.03
VSX2P58304 RNU6-528P-201ENST00000516926 100 ntBASIC2.39□□□□□ -2.03
VSX2P58304 OR10V3P-201ENST00000525712 725 ntBASIC2.39□□□□□ -2.03
VSX2P58304 AP001646.1-201ENST00000527936 915 ntBASIC2.39□□□□□ -2.03
VSX2P58304 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.39□□□□□ -2.03
VSX2P58304 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.39□□□□□ -2.03
VSX2P58304 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.39□□□□□ -2.03
VSX2P58304 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.39□□□□□ -2.03
VSX2P58304 YWHAZP1-201ENST00000556286 722 ntBASIC2.39□□□□□ -2.03
VSX2P58304 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.39□□□□□ -2.03
VSX2P58304 RPL23AP84-201ENST00000571193 464 ntBASIC2.39□□□□□ -2.03
VSX2P58304 AC011260.1-201ENST00000578420 472 ntBASIC2.39□□□□□ -2.03
VSX2P58304 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.39□□□□□ -2.03
VSX2P58304 MTND3P19-201ENST00000603825 345 ntBASIC2.39□□□□□ -2.03
VSX2P58304 AC013553.2-201ENST00000604244 589 ntBASIC2.39□□□□□ -2.03
VSX2P58304 AF129408.1-201ENST00000608767 431 ntBASIC2.39□□□□□ -2.03
VSX2P58304 BX664608.1-201ENST00000610519 487 ntBASIC2.39□□□□□ -2.03
VSX2P58304 PART1_2.1-201ENST00000612397 250 ntBASIC2.39□□□□□ -2.03
VSX2P58304 CRYM-AS1-204ENST00000637983 556 ntBASIC2.39□□□□□ -2.03
VSX2P58304 AC013437.2-201ENST00000639587 677 ntBASIC2.39□□□□□ -2.03
VSX2P58304 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
VSX2P58304 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
VSX2P58304 AC008568.2-201ENST00000623862 2313 ntBASIC2.39□□□□□ -2.03
VSX2P58304 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.39□□□□□ -2.03
VSX2P58304 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.38□□□□□ -2.03
VSX2P58304 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.38□□□□□ -2.03
VSX2P58304 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
VSX2P58304 MIR325-201ENST00000385260 98 ntBASIC2.38□□□□□ -2.03
VSX2P58304 AL356320.2-201ENST00000417263 507 ntBASIC2.38□□□□□ -2.03
VSX2P58304 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.38□□□□□ -2.03
VSX2P58304 MTCO1P53-201ENST00000441633 699 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms