Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 RNA5SP320-201ENST00000516263 124 ntBASIC2.58□□□□□ -2
CDH6P55285 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.58□□□□□ -2
CDH6P55285 AC068135.2-201ENST00000569293 1028 ntBASIC2.58□□□□□ -2
CDH6P55285 AC009163.5-201ENST00000575421 637 ntBASIC2.58□□□□□ -2
CDH6P55285 AL158211.4-201ENST00000606988 584 ntBASIC2.58□□□□□ -2
CDH6P55285 AC024257.5-201ENST00000612739 531 ntBASIC2.58□□□□□ -2
CDH6P55285 AL357080.1-201ENST00000617394 239 ntBASIC2.58□□□□□ -2
CDH6P55285 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.58□□□□□ -2
CDH6P55285 AC010297.1-201ENST00000623948 149 ntBASIC2.58□□□□□ -2
CDH6P55285 AP003476.1-201ENST00000623984 516 ntBASIC2.58□□□□□ -2
CDH6P55285 AL159972.1-201ENST00000625150 448 ntBASIC2.58□□□□□ -2
CDH6P55285 OR4G2P-202ENST00000641004 1759 ntBASIC2.58□□□□□ -2
CDH6P55285 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.58□□□□□ -2
CDH6P55285 AC131280.1-202ENST00000624067 4211 ntBASIC2.57□□□□□ -2
CDH6P55285 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
CDH6P55285 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.57□□□□□ -2
CDH6P55285 TPMTP2-201ENST00000414372 726 ntBASIC2.57□□□□□ -2
CDH6P55285 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.57□□□□□ -2
CDH6P55285 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC2.57□□□□□ -2
CDH6P55285 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.57□□□□□ -2
CDH6P55285 AL049873.1-201ENST00000480540 376 ntBASIC2.57□□□□□ -2
CDH6P55285 RPS27P27-201ENST00000498779 255 ntBASIC2.57□□□□□ -2
CDH6P55285 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.57□□□□□ -2
CDH6P55285 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.57□□□□□ -2
CDH6P55285 AP002748.2-201ENST00000528671 348 ntBASIC2.57□□□□□ -2
CDH6P55285 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.57□□□□□ -2
CDH6P55285 AL132857.1-201ENST00000555180 708 ntBASIC2.57□□□□□ -2
CDH6P55285 AC104072.1-201ENST00000568817 668 ntBASIC2.57□□□□□ -2
CDH6P55285 AC010546.1-201ENST00000569391 485 ntBASIC2.57□□□□□ -2
CDH6P55285 AP000787.2-201ENST00000604432 568 ntBASIC2.57□□□□□ -2
CDH6P55285 AL049779.4-201ENST00000604500 156 ntBASIC2.57□□□□□ -2
CDH6P55285 AC245517.5-201ENST00000611529 162 ntBASIC2.57□□□□□ -2
CDH6P55285 RNU6-1192P-201ENST00000612197 107 ntBASIC2.57□□□□□ -2
CDH6P55285 RNU6-489P-201ENST00000618289 107 ntBASIC2.57□□□□□ -2
CDH6P55285 UCA1.1-201ENST00000620952 75 ntBASIC2.57□□□□□ -2
CDH6P55285 AC135776.4-201ENST00000624300 1904 ntBASIC2.56□□□□□ -2
CDH6P55285 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
CDH6P55285 Y_RNA.234-201ENST00000364409 97 ntBASIC2.56□□□□□ -2
CDH6P55285 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.56□□□□□ -2
CDH6P55285 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.56□□□□□ -2
CDH6P55285 AC099548.1-201ENST00000421443 426 ntBASIC2.56□□□□□ -2
CDH6P55285 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.56□□□□□ -2
CDH6P55285 AC092427.1-202ENST00000430569 476 ntBASIC2.56□□□□□ -2
CDH6P55285 AC098826.1-201ENST00000433943 471 ntBASIC2.56□□□□□ -2
CDH6P55285 AC092155.2-201ENST00000454675 477 ntBASIC2.56□□□□□ -2
CDH6P55285 RPL23AP45-201ENST00000476406 468 ntBASIC2.56□□□□□ -2
CDH6P55285 RPL31P41-201ENST00000477967 372 ntBASIC2.56□□□□□ -2
CDH6P55285 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.56□□□□□ -2
CDH6P55285 MTCYBP17-201ENST00000503579 789 ntBASIC2.56□□□□□ -2
CDH6P55285 AC008716.1-201ENST00000511084 513 ntBASIC2.56□□□□□ -2
CDH6P55285 AC025881.1-201ENST00000518851 512 ntBASIC2.56□□□□□ -2
CDH6P55285 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.56□□□□□ -2
CDH6P55285 MTND1P36-201ENST00000522384 936 ntBASIC2.56□□□□□ -2
CDH6P55285 LRRC6P1-201ENST00000532188 885 ntBASIC2.56□□□□□ -2
CDH6P55285 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.56□□□□□ -2
CDH6P55285 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.56□□□□□ -2
CDH6P55285 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.56□□□□□ -2
CDH6P55285 RPL23AP84-201ENST00000571193 464 ntBASIC2.56□□□□□ -2
CDH6P55285 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.56□□□□□ -2
CDH6P55285 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.56□□□□□ -2
CDH6P55285 AC009237.15-201ENST00000610252 501 ntBASIC2.56□□□□□ -2
CDH6P55285 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.56□□□□□ -2
CDH6P55285 U4.3-201ENST00000621047 82 ntBASIC2.56□□□□□ -2
CDH6P55285 OR1S1-201ENST00000624470 978 ntBASIC2.56□□□□□ -2
CDH6P55285 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.56□□□□□ -2
CDH6P55285 AP003399.1-201ENST00000637534 361 ntBASIC2.56□□□□□ -2
CDH6P55285 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
CDH6P55285 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
CDH6P55285 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
CDH6P55285 CR848007.1-201ENST00000442354 1699 ntBASIC2.56□□□□□ -2
CDH6P55285 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CDH6P55285 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CDH6P55285 RNA5SP68-201ENST00000363885 119 ntBASIC2.55□□□□□ -2
CDH6P55285 SNORA25.6-201ENST00000364121 118 ntBASIC2.55□□□□□ -2
CDH6P55285 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.55□□□□□ -2
CDH6P55285 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.55□□□□□ -2
CDH6P55285 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.55□□□□□ -2
CDH6P55285 AC068533.2-201ENST00000411872 306 ntBASIC2.55□□□□□ -2
CDH6P55285 Z75741.2-201ENST00000417272 1167 ntBASIC2.55□□□□□ -2
CDH6P55285 AC008850.1-201ENST00000427546 362 ntBASIC2.55□□□□□ -2
CDH6P55285 MTCYBP3-201ENST00000445588 1137 ntBASIC2.55□□□□□ -2
CDH6P55285 AC104389.3-201ENST00000445629 235 ntBASIC2.55□□□□□ -2
CDH6P55285 RPL18AP17-201ENST00000455326 198 ntBASIC2.55□□□□□ -2
CDH6P55285 SNORD121B-201ENST00000458838 81 ntBASIC2.55□□□□□ -2
CDH6P55285 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.55□□□□□ -2
CDH6P55285 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.55□□□□□ -2
CDH6P55285 XKRY-201ENST00000510392 1100 ntBASIC2.55□□□□□ -2
CDH6P55285 CDC42P4-201ENST00000510507 563 ntBASIC2.55□□□□□ -2
CDH6P55285 AC006499.2-201ENST00000513470 337 ntBASIC2.55□□□□□ -2
CDH6P55285 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.55□□□□□ -2
CDH6P55285 OR5BN1P-201ENST00000532955 829 ntBASIC2.55□□□□□ -2
CDH6P55285 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.55□□□□□ -2
CDH6P55285 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.55□□□□□ -2
CDH6P55285 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.55□□□□□ -2
CDH6P55285 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.55□□□□□ -2
CDH6P55285 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.55□□□□□ -2
CDH6P55285 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.55□□□□□ -2
CDH6P55285 AL079343.1-201ENST00000572358 1771 ntBASIC2.55□□□□□ -2
CDH6P55285 MIR4446-201ENST00000578505 67 ntBASIC2.55□□□□□ -2
CDH6P55285 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms