Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.6□□□□□ -1.99
SMARCA2P51531 AC008885.2-201ENST00000509506 930 ntBASIC2.6□□□□□ -1.99
SMARCA2P51531 HMGB3P3-201ENST00000510526 400 ntBASIC2.6□□□□□ -1.99
SMARCA2P51531 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.6□□□□□ -1.99
SMARCA2P51531 AC008962.1-201ENST00000605729 304 ntBASIC2.6□□□□□ -1.99
SMARCA2P51531 AC006329.2-201ENST00000611491 394 ntBASIC2.6□□□□□ -1.99
SMARCA2P51531 AC079597.1-201ENST00000624306 508 ntBASIC2.6□□□□□ -1.99
SMARCA2P51531 AC103710.2-202ENST00000641454 2853 ntBASIC2.59□□□□□ -1.99
SMARCA2P51531 U8.1-201ENST00000362843 134 ntBASIC2.59□□□□□ -1.99
SMARCA2P51531 MIR520E-201ENST00000384867 87 ntBASIC2.59□□□□□ -1.99
SMARCA2P51531 HMGN2P38-201ENST00000423806 265 ntBASIC2.59□□□□□ -1.99
SMARCA2P51531 PGBD4P3-201ENST00000440731 581 ntBASIC2.59□□□□□ -1.99
SMARCA2P51531 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.59□□□□□ -1.99
SMARCA2P51531 AC109635.4-202ENST00000531666 412 ntBASIC2.59□□□□□ -1.99
SMARCA2P51531 AC019131.2-201ENST00000609071 870 ntBASIC2.59□□□□□ -1.99
SMARCA2P51531 AL158801.5-201ENST00000623123 465 ntBASIC2.59□□□□□ -1.99
SMARCA2P51531 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.59□□□□□ -1.99
SMARCA2P51531 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.59□□□□□ -1.99
SMARCA2P51531 RNU6-1181P-201ENST00000384191 106 ntBASIC2.58□□□□□ -2
SMARCA2P51531 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.58□□□□□ -2
SMARCA2P51531 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.58□□□□□ -2
SMARCA2P51531 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.58□□□□□ -2
SMARCA2P51531 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.58□□□□□ -2
SMARCA2P51531 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.58□□□□□ -2
SMARCA2P51531 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.58□□□□□ -2
SMARCA2P51531 MIR4496-201ENST00000635896 61 ntBASIC2.58□□□□□ -2
SMARCA2P51531 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SMARCA2P51531 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SMARCA2P51531 Y_RNA.30-201ENST00000362572 97 ntBASIC2.57□□□□□ -2
SMARCA2P51531 HMGN2P19-201ENST00000425149 265 ntBASIC2.57□□□□□ -2
SMARCA2P51531 RPS6P15-201ENST00000431996 751 ntBASIC2.57□□□□□ -2
SMARCA2P51531 AC010301.1-201ENST00000473936 355 ntBASIC2.57□□□□□ -2
SMARCA2P51531 AC087879.1-201ENST00000474343 374 ntBASIC2.57□□□□□ -2
SMARCA2P51531 TRBV8-1-201ENST00000481590 279 ntBASIC2.57□□□□□ -2
SMARCA2P51531 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.57□□□□□ -2
SMARCA2P51531 MTCO1P47-201ENST00000523889 1271 ntBASIC2.57□□□□□ -2
SMARCA2P51531 MTATP6P3-201ENST00000581686 676 ntBASIC2.57□□□□□ -2
SMARCA2P51531 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.57□□□□□ -2
SMARCA2P51531 AL391646.1-201ENST00000603860 190 ntBASIC2.57□□□□□ -2
SMARCA2P51531 AC116563.2-201ENST00000624751 535 ntBASIC2.57□□□□□ -2
SMARCA2P51531 DDX10P1-201ENST00000448545 1933 ntBASIC2.57□□□□□ -2
SMARCA2P51531 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SMARCA2P51531 MIR524-201ENST00000385242 87 ntBASIC2.57□□□□□ -2
SMARCA2P51531 MORF4L1P7-201ENST00000426038 703 ntBASIC2.57□□□□□ -2
SMARCA2P51531 PSMA2P3-201ENST00000429685 675 ntBASIC2.57□□□□□ -2
SMARCA2P51531 CKS1BP5-201ENST00000434172 273 ntBASIC2.57□□□□□ -2
SMARCA2P51531 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.57□□□□□ -2
SMARCA2P51531 AL513343.1-201ENST00000451818 792 ntBASIC2.57□□□□□ -2
SMARCA2P51531 COX6CP14-201ENST00000469580 174 ntBASIC2.57□□□□□ -2
SMARCA2P51531 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.57□□□□□ -2
SMARCA2P51531 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.57□□□□□ -2
SMARCA2P51531 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.57□□□□□ -2
SMARCA2P51531 AC087808.1-201ENST00000520501 361 ntBASIC2.57□□□□□ -2
SMARCA2P51531 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC2.57□□□□□ -2
SMARCA2P51531 AC011712.1-201ENST00000588959 234 ntBASIC2.57□□□□□ -2
SMARCA2P51531 AC090740.1-201ENST00000623193 2262 ntBASIC2.56□□□□□ -2
SMARCA2P51531 RNU6-335P-201ENST00000364563 113 ntBASIC2.56□□□□□ -2
SMARCA2P51531 MIR548J-201ENST00000408833 112 ntBASIC2.56□□□□□ -2
SMARCA2P51531 TPMTP3-201ENST00000411928 735 ntBASIC2.56□□□□□ -2
SMARCA2P51531 snoU109.4-201ENST00000458953 143 ntBASIC2.56□□□□□ -2
SMARCA2P51531 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.56□□□□□ -2
SMARCA2P51531 TRAV28-201ENST00000557548 323 ntBASIC2.56□□□□□ -2
SMARCA2P51531 FAM106DP-201ENST00000586416 501 ntBASIC2.56□□□□□ -2
SMARCA2P51531 uc_338.20-201ENST00000621563 178 ntBASIC2.56□□□□□ -2
SMARCA2P51531 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.55□□□□□ -2
SMARCA2P51531 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.55□□□□□ -2
SMARCA2P51531 IPO7P1-201ENST00000442031 636 ntBASIC2.55□□□□□ -2
SMARCA2P51531 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.55□□□□□ -2
SMARCA2P51531 RNA5SP364-201ENST00000516938 78 ntBASIC2.55□□□□□ -2
SMARCA2P51531 AC112503.2-201ENST00000609005 552 ntBASIC2.55□□□□□ -2
SMARCA2P51531 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.55□□□□□ -2
SMARCA2P51531 Z82195.2-201ENST00000612348 18351 ntBASIC2.54□□□□□ -2
SMARCA2P51531 AL596028.1-201ENST00000326971 197 ntBASIC2.54□□□□□ -2
SMARCA2P51531 RNU6ATAC20P-201ENST00000408436 127 ntBASIC2.54□□□□□ -2
SMARCA2P51531 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC2.54□□□□□ -2
SMARCA2P51531 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.54□□□□□ -2
SMARCA2P51531 Z85994.2-201ENST00000434327 452 ntBASIC2.54□□□□□ -2
SMARCA2P51531 AL035407.2-201ENST00000454090 378 ntBASIC2.54□□□□□ -2
SMARCA2P51531 AC093767.1-201ENST00000504523 156 ntBASIC2.54□□□□□ -2
SMARCA2P51531 AC022690.1-201ENST00000526681 550 ntBASIC2.54□□□□□ -2
SMARCA2P51531 RPL21P5-201ENST00000554662 472 ntBASIC2.54□□□□□ -2
SMARCA2P51531 NUTF2P8-201ENST00000604593 363 ntBASIC2.54□□□□□ -2
SMARCA2P51531 AC106028.5-201ENST00000610332 395 ntBASIC2.54□□□□□ -2
SMARCA2P51531 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.54□□□□□ -2
SMARCA2P51531 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
SMARCA2P51531 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.54□□□□□ -2
SMARCA2P51531 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.53□□□□□ -2
SMARCA2P51531 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.53□□□□□ -2
SMARCA2P51531 CALM1P1-201ENST00000442082 433 ntBASIC2.53□□□□□ -2
SMARCA2P51531 AC004223.1-201ENST00000479840 271 ntBASIC2.53□□□□□ -2
SMARCA2P51531 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.53□□□□□ -2
SMARCA2P51531 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.53□□□□□ -2
SMARCA2P51531 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.53□□□□□ -2
SMARCA2P51531 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.53□□□□□ -2
SMARCA2P51531 AC068135.2-201ENST00000569293 1028 ntBASIC2.53□□□□□ -2
SMARCA2P51531 AC106791.2-201ENST00000604680 391 ntBASIC2.53□□□□□ -2
SMARCA2P51531 BNIP3P4-201ENST00000604946 565 ntBASIC2.53□□□□□ -2
SMARCA2P51531 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
SMARCA2P51531 Z85995.1-201ENST00000415547 335 ntBASIC2.53□□□□□ -2.01
SMARCA2P51531 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.53□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms