Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.92□□□□□ -2.1
CDC34P49427 AC025181.1-201ENST00000477507 416 ntBASIC1.92□□□□□ -2.1
CDC34P49427 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CDC34P49427 AC090453.1-201ENST00000495560 436 ntBASIC1.92□□□□□ -2.1
CDC34P49427 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.92□□□□□ -2.1
CDC34P49427 HIGD1AP13-201ENST00000509878 289 ntBASIC1.92□□□□□ -2.1
CDC34P49427 AC017037.2-201ENST00000513850 890 ntBASIC1.92□□□□□ -2.1
CDC34P49427 OR4R2P-201ENST00000530815 597 ntBASIC1.92□□□□□ -2.1
CDC34P49427 AC118273.2-201ENST00000532092 465 ntBASIC1.92□□□□□ -2.1
CDC34P49427 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.92□□□□□ -2.1
CDC34P49427 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.92□□□□□ -2.1
CDC34P49427 CYCSP2-201ENST00000558168 301 ntBASIC1.92□□□□□ -2.1
CDC34P49427 AC007151.1-201ENST00000572774 483 ntBASIC1.92□□□□□ -2.1
CDC34P49427 MIR4529-201ENST00000578110 78 ntBASIC1.92□□□□□ -2.1
CDC34P49427 AC002984.1-201ENST00000591692 448 ntBASIC1.92□□□□□ -2.1
CDC34P49427 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.92□□□□□ -2.1
CDC34P49427 AL391813.1-201ENST00000603098 260 ntBASIC1.92□□□□□ -2.1
CDC34P49427 AP002906.1-201ENST00000603405 233 ntBASIC1.92□□□□□ -2.1
CDC34P49427 AP001521.1-201ENST00000609150 300 ntBASIC1.92□□□□□ -2.1
CDC34P49427 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.92□□□□□ -2.1
CDC34P49427 AC098657.3-201ENST00000620434 263 ntBASIC1.92□□□□□ -2.1
CDC34P49427 U4.3-201ENST00000621047 82 ntBASIC1.92□□□□□ -2.1
CDC34P49427 AC008443.7-201ENST00000622195 246 ntBASIC1.92□□□□□ -2.1
CDC34P49427 AC007998.5-201ENST00000622938 237 ntBASIC1.92□□□□□ -2.1
CDC34P49427 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC1.92□□□□□ -2.1
CDC34P49427 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
CDC34P49427 OR5T3-201ENST00000303059 1023 ntBASIC1.91□□□□□ -2.1
CDC34P49427 MIR21-201ENST00000362134 72 ntBASIC1.91□□□□□ -2.1
CDC34P49427 RNA5SP72-201ENST00000364442 117 ntBASIC1.91□□□□□ -2.1
CDC34P49427 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.91□□□□□ -2.1
CDC34P49427 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
CDC34P49427 MIR9-1-201ENST00000385198 89 ntBASIC1.91□□□□□ -2.1
CDC34P49427 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CDC34P49427 GSTA9P-201ENST00000406231 611 ntBASIC1.91□□□□□ -2.1
CDC34P49427 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.91□□□□□ -2.1
CDC34P49427 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.91□□□□□ -2.1
CDC34P49427 AIMP1P2-201ENST00000425294 312 ntBASIC1.91□□□□□ -2.1
CDC34P49427 RPL35AP12-201ENST00000425362 338 ntBASIC1.91□□□□□ -2.1
CDC34P49427 RPS3AP44-201ENST00000425466 790 ntBASIC1.91□□□□□ -2.1
CDC34P49427 AL590233.1-201ENST00000430017 456 ntBASIC1.91□□□□□ -2.1
CDC34P49427 ZYG11AP1-201ENST00000430329 837 ntBASIC1.91□□□□□ -2.1
CDC34P49427 ATP5F1P1-201ENST00000433775 569 ntBASIC1.91□□□□□ -2.1
CDC34P49427 AL512661.1-201ENST00000434586 1253 ntBASIC1.91□□□□□ -2.1
CDC34P49427 COX6CP18-201ENST00000448769 222 ntBASIC1.91□□□□□ -2.1
CDC34P49427 AC005297.2-201ENST00000450430 606 ntBASIC1.91□□□□□ -2.1
CDC34P49427 AL121769.1-201ENST00000469473 401 ntBASIC1.91□□□□□ -2.1
CDC34P49427 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC1.91□□□□□ -2.1
CDC34P49427 MRPS17P9-201ENST00000511924 393 ntBASIC1.91□□□□□ -2.1
CDC34P49427 SNORA31.6-201ENST00000516241 130 ntBASIC1.91□□□□□ -2.1
CDC34P49427 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
CDC34P49427 AC078814.3-201ENST00000553036 491 ntBASIC1.91□□□□□ -2.1
CDC34P49427 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.91□□□□□ -2.1
CDC34P49427 AC022662.1-201ENST00000580252 331 ntBASIC1.91□□□□□ -2.1
CDC34P49427 AC105245.1-201ENST00000581934 244 ntBASIC1.91□□□□□ -2.1
CDC34P49427 MIR4448-201ENST00000584360 86 ntBASIC1.91□□□□□ -2.1
CDC34P49427 AP003973.1-201ENST00000604639 691 ntBASIC1.91□□□□□ -2.1
CDC34P49427 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.91□□□□□ -2.1
CDC34P49427 MTND1P37-201ENST00000636562 264 ntBASIC1.91□□□□□ -2.1
CDC34P49427 MTCO1P9-201ENST00000505577 1534 ntBASIC1.91□□□□□ -2.1
CDC34P49427 AC011477.1-204ENST00000623416 1325 ntBASIC1.91□□□□□ -2.1
CDC34P49427 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.9□□□□□ -2.1
CDC34P49427 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
CDC34P49427 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.9□□□□□ -2.11
CDC34P49427 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CDC34P49427 RNU6-884P-201ENST00000363889 107 ntBASIC1.9□□□□□ -2.11
CDC34P49427 MIR449B-201ENST00000384995 97 ntBASIC1.9□□□□□ -2.11
CDC34P49427 MIR506-201ENST00000384998 124 ntBASIC1.9□□□□□ -2.11
CDC34P49427 U6atac.2-201ENST00000408644 118 ntBASIC1.9□□□□□ -2.11
CDC34P49427 AC096664.2-201ENST00000411843 406 ntBASIC1.9□□□□□ -2.11
CDC34P49427 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CDC34P49427 AL139413.1-201ENST00000421309 217 ntBASIC1.9□□□□□ -2.11
CDC34P49427 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.11
CDC34P49427 AC098831.1-201ENST00000440661 216 ntBASIC1.9□□□□□ -2.11
CDC34P49427 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.9□□□□□ -2.11
CDC34P49427 RPS3AP12-201ENST00000443616 753 ntBASIC1.9□□□□□ -2.11
CDC34P49427 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC1.9□□□□□ -2.11
CDC34P49427 AL500527.1-201ENST00000448532 255 ntBASIC1.9□□□□□ -2.11
CDC34P49427 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.9□□□□□ -2.11
CDC34P49427 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC1.9□□□□□ -2.11
CDC34P49427 LTV1P1-201ENST00000510683 1237 ntBASIC1.9□□□□□ -2.11
CDC34P49427 OR5AQ1P-201ENST00000527596 927 ntBASIC1.9□□□□□ -2.11
CDC34P49427 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC1.9□□□□□ -2.11
CDC34P49427 HSPE1P3-201ENST00000559254 309 ntBASIC1.9□□□□□ -2.11
CDC34P49427 MIR4287-201ENST00000579398 78 ntBASIC1.9□□□□□ -2.11
CDC34P49427 AC061975.8-201ENST00000587058 721 ntBASIC1.9□□□□□ -2.11
CDC34P49427 AP001542.1-201ENST00000591314 200 ntBASIC1.9□□□□□ -2.11
CDC34P49427 AC136601.2-201ENST00000604356 474 ntBASIC1.9□□□□□ -2.11
CDC34P49427 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.9□□□□□ -2.11
CDC34P49427 AL596245.1-201ENST00000618994 362 ntBASIC1.9□□□□□ -2.11
CDC34P49427 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC1.9□□□□□ -2.11
CDC34P49427 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.9□□□□□ -2.11
CDC34P49427 ZNF658B-202ENST00000615961 3375 ntBASIC1.9□□□□□ -2.11
CDC34P49427 AC110491.1-201ENST00000562191 2010 ntBASIC1.9□□□□□ -2.11
CDC34P49427 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.89□□□□□ -2.11
CDC34P49427 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC1.89□□□□□ -2.11
CDC34P49427 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CDC34P49427 MIR16-2-201ENST00000362117 81 ntBASIC1.89□□□□□ -2.11
CDC34P49427 RNU1-140P-201ENST00000365040 165 ntBASIC1.89□□□□□ -2.11
CDC34P49427 SUGT1P1-201ENST00000379514 476 ntBASIC1.89□□□□□ -2.11
CDC34P49427 MIR218-1-201ENST00000384999 110 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms