Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.39□□□□□ -2.03
CX3CR1P49238 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.39□□□□□ -2.03
CX3CR1P49238 Z82210.1-201ENST00000440037 231 ntBASIC2.39□□□□□ -2.03
CX3CR1P49238 MTND5P14-201ENST00000441481 1267 ntBASIC2.39□□□□□ -2.03
CX3CR1P49238 PIGFP3-201ENST00000441918 722 ntBASIC2.39□□□□□ -2.03
CX3CR1P49238 ZNF886P-201ENST00000450781 723 ntBASIC2.39□□□□□ -2.03
CX3CR1P49238 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
CX3CR1P49238 AC138853.1-201ENST00000503549 823 ntBASIC2.39□□□□□ -2.03
CX3CR1P49238 AC022447.3-201ENST00000506865 495 ntBASIC2.39□□□□□ -2.03
CX3CR1P49238 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.39□□□□□ -2.03
CX3CR1P49238 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.39□□□□□ -2.03
CX3CR1P49238 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.39□□□□□ -2.03
CX3CR1P49238 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.39□□□□□ -2.03
CX3CR1P49238 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
CX3CR1P49238 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.39□□□□□ -2.03
CX3CR1P49238 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.39□□□□□ -2.03
CX3CR1P49238 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.39□□□□□ -2.03
CX3CR1P49238 AL512347.1-201ENST00000566420 503 ntBASIC2.39□□□□□ -2.03
CX3CR1P49238 AC005498.1-201ENST00000592125 465 ntBASIC2.39□□□□□ -2.03
CX3CR1P49238 AL355877.2-201ENST00000603670 358 ntBASIC2.39□□□□□ -2.03
CX3CR1P49238 AC011458.1-201ENST00000604034 617 ntBASIC2.39□□□□□ -2.03
CX3CR1P49238 AL442067.2-201ENST00000614033 363 ntBASIC2.39□□□□□ -2.03
CX3CR1P49238 AC079395.3-201ENST00000615161 484 ntBASIC2.39□□□□□ -2.03
CX3CR1P49238 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.39□□□□□ -2.03
CX3CR1P49238 CR381653.2-201ENST00000624041 768 ntBASIC2.39□□□□□ -2.03
CX3CR1P49238 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.39□□□□□ -2.03
CX3CR1P49238 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.39□□□□□ -2.03
CX3CR1P49238 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CX3CR1P49238 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
CX3CR1P49238 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.38□□□□□ -2.03
CX3CR1P49238 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CX3CR1P49238 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CX3CR1P49238 AC022336.2-201ENST00000568966 2538 ntBASIC2.38□□□□□ -2.03
CX3CR1P49238 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
CX3CR1P49238 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CX3CR1P49238 Y_RNA.192-201ENST00000363977 102 ntBASIC2.38□□□□□ -2.03
CX3CR1P49238 SNORA23-201ENST00000365128 182 ntBASIC2.38□□□□□ -2.03
CX3CR1P49238 RNU6-741P-201ENST00000383889 107 ntBASIC2.38□□□□□ -2.03
CX3CR1P49238 RNU1-39P-201ENST00000383897 165 ntBASIC2.38□□□□□ -2.03
CX3CR1P49238 RNU6-217P-201ENST00000384164 104 ntBASIC2.38□□□□□ -2.03
CX3CR1P49238 UBA52P6-201ENST00000399822 382 ntBASIC2.38□□□□□ -2.03
CX3CR1P49238 AL109755.1-201ENST00000401791 649 ntBASIC2.38□□□□□ -2.03
CX3CR1P49238 AL136310.1-201ENST00000404926 654 ntBASIC2.38□□□□□ -2.03
CX3CR1P49238 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.38□□□□□ -2.03
CX3CR1P49238 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.38□□□□□ -2.03
CX3CR1P49238 AL513175.2-201ENST00000422071 443 ntBASIC2.38□□□□□ -2.03
CX3CR1P49238 MTCO2P20-201ENST00000437339 673 ntBASIC2.38□□□□□ -2.03
CX3CR1P49238 RPS15AP7-201ENST00000439294 405 ntBASIC2.38□□□□□ -2.03
CX3CR1P49238 FGF7P5-201ENST00000441829 291 ntBASIC2.38□□□□□ -2.03
CX3CR1P49238 NANOGNBP1-201ENST00000448444 480 ntBASIC2.38□□□□□ -2.03
CX3CR1P49238 MTND1P31-201ENST00000449206 961 ntBASIC2.38□□□□□ -2.03
CX3CR1P49238 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CX3CR1P49238 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.38□□□□□ -2.03
CX3CR1P49238 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.38□□□□□ -2.03
CX3CR1P49238 ATG12P2-201ENST00000456830 416 ntBASIC2.38□□□□□ -2.03
CX3CR1P49238 AC005410.1-202ENST00000460347 485 ntBASIC2.38□□□□□ -2.03
CX3CR1P49238 KC877373.1-201ENST00000479066 408 ntBASIC2.38□□□□□ -2.03
CX3CR1P49238 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.38□□□□□ -2.03
CX3CR1P49238 RPS15AP34-201ENST00000487776 387 ntBASIC2.38□□□□□ -2.03
CX3CR1P49238 TBCAP3-201ENST00000512475 312 ntBASIC2.38□□□□□ -2.03
CX3CR1P49238 MTND5P4-201ENST00000514978 288 ntBASIC2.38□□□□□ -2.03
CX3CR1P49238 RNU6-150P-201ENST00000516237 95 ntBASIC2.38□□□□□ -2.03
CX3CR1P49238 RPPH1-2P-201ENST00000516688 293 ntBASIC2.38□□□□□ -2.03
CX3CR1P49238 COX6CP8-201ENST00000522620 226 ntBASIC2.38□□□□□ -2.03
CX3CR1P49238 AP003497.1-201ENST00000528472 562 ntBASIC2.38□□□□□ -2.03
CX3CR1P49238 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.38□□□□□ -2.03
CX3CR1P49238 AL391261.3-201ENST00000557194 520 ntBASIC2.38□□□□□ -2.03
CX3CR1P49238 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.38□□□□□ -2.03
CX3CR1P49238 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CX3CR1P49238 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.38□□□□□ -2.03
CX3CR1P49238 HMGN2P15-201ENST00000585707 270 ntBASIC2.38□□□□□ -2.03
CX3CR1P49238 AC011471.1-201ENST00000585766 187 ntBASIC2.38□□□□□ -2.03
CX3CR1P49238 AC060766.3-201ENST00000591442 263 ntBASIC2.38□□□□□ -2.03
CX3CR1P49238 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.38□□□□□ -2.03
CX3CR1P49238 AL356575.1-201ENST00000603008 283 ntBASIC2.38□□□□□ -2.03
CX3CR1P49238 AC004987.4-201ENST00000603383 338 ntBASIC2.38□□□□□ -2.03
CX3CR1P49238 AP000787.2-201ENST00000604432 568 ntBASIC2.38□□□□□ -2.03
CX3CR1P49238 AC106052.1-201ENST00000608029 497 ntBASIC2.38□□□□□ -2.03
CX3CR1P49238 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.38□□□□□ -2.03
CX3CR1P49238 AC013476.2-201ENST00000614456 459 ntBASIC2.38□□□□□ -2.03
CX3CR1P49238 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.38□□□□□ -2.03
CX3CR1P49238 AC006378.2-201ENST00000623178 2476 ntBASIC2.38□□□□□ -2.03
CX3CR1P49238 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.38□□□□□ -2.03
CX3CR1P49238 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CX3CR1P49238 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CX3CR1P49238 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CX3CR1P49238 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
CX3CR1P49238 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.37□□□□□ -2.03
CX3CR1P49238 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
CX3CR1P49238 SNORA18.3-201ENST00000384122 132 ntBASIC2.37□□□□□ -2.03
CX3CR1P49238 TPMTP3-201ENST00000411928 735 ntBASIC2.37□□□□□ -2.03
CX3CR1P49238 MTCO2P8-201ENST00000412213 658 ntBASIC2.37□□□□□ -2.03
CX3CR1P49238 MTATP6P20-201ENST00000414147 562 ntBASIC2.37□□□□□ -2.03
CX3CR1P49238 NANOGP5-201ENST00000424456 877 ntBASIC2.37□□□□□ -2.03
CX3CR1P49238 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.37□□□□□ -2.03
CX3CR1P49238 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.37□□□□□ -2.03
CX3CR1P49238 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.37□□□□□ -2.03
CX3CR1P49238 AL031313.1-201ENST00000448435 256 ntBASIC2.37□□□□□ -2.03
CX3CR1P49238 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.37□□□□□ -2.03
CX3CR1P49238 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms