Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.38□□□□□ -2.03
RFC3P40938 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
RFC3P40938 snoZ40.1-201ENST00000364540 72 ntBASIC2.38□□□□□ -2.03
RFC3P40938 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
RFC3P40938 Y_RNA.578-201ENST00000390903 88 ntBASIC2.38□□□□□ -2.03
RFC3P40938 RNU6-193P-201ENST00000410977 107 ntBASIC2.38□□□□□ -2.03
RFC3P40938 RNA5SP508-201ENST00000411327 119 ntBASIC2.38□□□□□ -2.03
RFC3P40938 VN1R51P-201ENST00000411675 945 ntBASIC2.38□□□□□ -2.03
RFC3P40938 TPMTP2-201ENST00000414372 726 ntBASIC2.38□□□□□ -2.03
RFC3P40938 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.38□□□□□ -2.03
RFC3P40938 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.38□□□□□ -2.03
RFC3P40938 RPS3P1-201ENST00000456781 192 ntBASIC2.38□□□□□ -2.03
RFC3P40938 RNU7-23P-201ENST00000459465 62 ntBASIC2.38□□□□□ -2.03
RFC3P40938 RN7SL429P-201ENST00000479090 223 ntBASIC2.38□□□□□ -2.03
RFC3P40938 RN7SL489P-201ENST00000486185 223 ntBASIC2.38□□□□□ -2.03
RFC3P40938 RN7SL327P-201ENST00000488659 223 ntBASIC2.38□□□□□ -2.03
RFC3P40938 AL049874.1-201ENST00000489560 388 ntBASIC2.38□□□□□ -2.03
RFC3P40938 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.38□□□□□ -2.03
RFC3P40938 AC008413.1-201ENST00000511864 177 ntBASIC2.38□□□□□ -2.03
RFC3P40938 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.38□□□□□ -2.03
RFC3P40938 RNU6-583P-201ENST00000516012 92 ntBASIC2.38□□□□□ -2.03
RFC3P40938 SNORA9.3-201ENST00000516383 129 ntBASIC2.38□□□□□ -2.03
RFC3P40938 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.38□□□□□ -2.03
RFC3P40938 AC100870.1-201ENST00000522035 505 ntBASIC2.38□□□□□ -2.03
RFC3P40938 UBTFL10-201ENST00000528532 562 ntBASIC2.38□□□□□ -2.03
RFC3P40938 AC068135.2-201ENST00000569293 1028 ntBASIC2.38□□□□□ -2.03
RFC3P40938 AL160237.3-201ENST00000604114 1013 ntBASIC2.38□□□□□ -2.03
RFC3P40938 RPL21P136-201ENST00000605378 396 ntBASIC2.38□□□□□ -2.03
RFC3P40938 AC093673.2-201ENST00000609674 331 ntBASIC2.38□□□□□ -2.03
RFC3P40938 AC013412.1-201ENST00000610687 192 ntBASIC2.38□□□□□ -2.03
RFC3P40938 RN7SL853P-201ENST00000617250 223 ntBASIC2.38□□□□□ -2.03
RFC3P40938 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
RFC3P40938 AL049641.1-201ENST00000441055 1948 ntBASIC2.38□□□□□ -2.03
RFC3P40938 AC109315.1-201ENST00000584143 1347 ntBASIC2.38□□□□□ -2.03
RFC3P40938 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
RFC3P40938 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.38□□□□□ -2.03
RFC3P40938 MTCO1P9-201ENST00000505577 1534 ntBASIC2.37□□□□□ -2.03
RFC3P40938 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
RFC3P40938 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.37□□□□□ -2.03
RFC3P40938 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
RFC3P40938 RNU6-1122P-201ENST00000384449 107 ntBASIC2.37□□□□□ -2.03
RFC3P40938 MIR627-201ENST00000384979 97 ntBASIC2.37□□□□□ -2.03
RFC3P40938 MIR325-201ENST00000385260 98 ntBASIC2.37□□□□□ -2.03
RFC3P40938 RNA5SP354-201ENST00000391247 136 ntBASIC2.37□□□□□ -2.03
RFC3P40938 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.37□□□□□ -2.03
RFC3P40938 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.37□□□□□ -2.03
RFC3P40938 RNA5SP181-201ENST00000410246 98 ntBASIC2.37□□□□□ -2.03
RFC3P40938 AC096533.1-201ENST00000411645 353 ntBASIC2.37□□□□□ -2.03
RFC3P40938 AC068533.2-201ENST00000411872 306 ntBASIC2.37□□□□□ -2.03
RFC3P40938 AL139421.1-201ENST00000423010 169 ntBASIC2.37□□□□□ -2.03
RFC3P40938 MYL8P-204ENST00000431574 518 ntBASIC2.37□□□□□ -2.03
RFC3P40938 HMGN1P5-201ENST00000448591 263 ntBASIC2.37□□□□□ -2.03
RFC3P40938 ARPC3P5-201ENST00000448802 534 ntBASIC2.37□□□□□ -2.03
RFC3P40938 AC087588.1-201ENST00000462203 316 ntBASIC2.37□□□□□ -2.03
RFC3P40938 MTND4LP3-201ENST00000468320 276 ntBASIC2.37□□□□□ -2.03
RFC3P40938 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.37□□□□□ -2.03
RFC3P40938 AC108734.3-201ENST00000481241 1165 ntBASIC2.37□□□□□ -2.03
RFC3P40938 AC069528.1-202ENST00000482888 637 ntBASIC2.37□□□□□ -2.03
RFC3P40938 AC006499.2-201ENST00000513470 337 ntBASIC2.37□□□□□ -2.03
RFC3P40938 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.37□□□□□ -2.03
RFC3P40938 SNORA31.11-201ENST00000516528 139 ntBASIC2.37□□□□□ -2.03
RFC3P40938 RNU6-1256P-201ENST00000516539 103 ntBASIC2.37□□□□□ -2.03
RFC3P40938 RNA5SP402-201ENST00000517148 110 ntBASIC2.37□□□□□ -2.03
RFC3P40938 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.37□□□□□ -2.03
RFC3P40938 AL132857.1-201ENST00000555180 708 ntBASIC2.37□□□□□ -2.03
RFC3P40938 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.37□□□□□ -2.03
RFC3P40938 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.37□□□□□ -2.03
RFC3P40938 AC010546.1-201ENST00000569391 485 ntBASIC2.37□□□□□ -2.03
RFC3P40938 AC060766.3-201ENST00000591442 263 ntBASIC2.37□□□□□ -2.03
RFC3P40938 TPMTP1-201ENST00000592307 737 ntBASIC2.37□□□□□ -2.03
RFC3P40938 AC024257.5-201ENST00000612739 531 ntBASIC2.37□□□□□ -2.03
RFC3P40938 AC011890.2-201ENST00000613393 294 ntBASIC2.37□□□□□ -2.03
RFC3P40938 AL357080.1-201ENST00000617394 239 ntBASIC2.37□□□□□ -2.03
RFC3P40938 AC008443.7-201ENST00000622195 246 ntBASIC2.37□□□□□ -2.03
RFC3P40938 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.37□□□□□ -2.03
RFC3P40938 AC126544.2-201ENST00000625174 749 ntBASIC2.37□□□□□ -2.03
RFC3P40938 MIR4275-201ENST00000636486 87 ntBASIC2.37□□□□□ -2.03
RFC3P40938 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RFC3P40938 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.37□□□□□ -2.03
RFC3P40938 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.36□□□□□ -2.03
RFC3P40938 AC007785.2-201ENST00000598627 1916 ntBASIC2.36□□□□□ -2.03
RFC3P40938 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RFC3P40938 OR4G2P-202ENST00000641004 1759 ntBASIC2.36□□□□□ -2.03
RFC3P40938 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
RFC3P40938 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.36□□□□□ -2.03
RFC3P40938 Y_RNA.548-201ENST00000384656 105 ntBASIC2.36□□□□□ -2.03
RFC3P40938 RNA5SP210-201ENST00000391034 120 ntBASIC2.36□□□□□ -2.03
RFC3P40938 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.36□□□□□ -2.03
RFC3P40938 RPLP0P7-201ENST00000416050 667 ntBASIC2.36□□□□□ -2.03
RFC3P40938 AC099548.1-201ENST00000421443 426 ntBASIC2.36□□□□□ -2.03
RFC3P40938 AL035407.1-201ENST00000429211 571 ntBASIC2.36□□□□□ -2.03
RFC3P40938 SUMO1P4-201ENST00000429430 302 ntBASIC2.36□□□□□ -2.03
RFC3P40938 BMI1P1-201ENST00000445879 941 ntBASIC2.36□□□□□ -2.03
RFC3P40938 AL513328.1-201ENST00000446460 224 ntBASIC2.36□□□□□ -2.03
RFC3P40938 WASF1P1-201ENST00000447560 1131 ntBASIC2.36□□□□□ -2.03
RFC3P40938 MTCYBP17-201ENST00000503579 789 ntBASIC2.36□□□□□ -2.03
RFC3P40938 AC016550.1-201ENST00000505348 785 ntBASIC2.36□□□□□ -2.03
RFC3P40938 RPL37P25-201ENST00000507308 276 ntBASIC2.36□□□□□ -2.03
RFC3P40938 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.36□□□□□ -2.03
RFC3P40938 OR5BM1P-201ENST00000512021 366 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms