Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AC008121.3-201ENST00000618726 433 ntBASIC1.97□□□□□ -2.09
CLIP1P30622 AC022079.2-201ENST00000619739 566 ntBASIC1.97□□□□□ -2.09
CLIP1P30622 AC007342.9-201ENST00000623877 1385 ntBASIC1.97□□□□□ -2.09
CLIP1P30622 RNA5SP325-201ENST00000363756 130 ntBASIC1.96□□□□□ -2.1
CLIP1P30622 RNU6-225P-201ENST00000384613 103 ntBASIC1.96□□□□□ -2.1
CLIP1P30622 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.96□□□□□ -2.1
CLIP1P30622 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.96□□□□□ -2.1
CLIP1P30622 NAP1L4P3-201ENST00000432820 1147 ntBASIC1.96□□□□□ -2.1
CLIP1P30622 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.96□□□□□ -2.1
CLIP1P30622 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.96□□□□□ -2.1
CLIP1P30622 ATG12P2-201ENST00000456830 416 ntBASIC1.96□□□□□ -2.1
CLIP1P30622 AC146507.1-201ENST00000468335 354 ntBASIC1.96□□□□□ -2.1
CLIP1P30622 RPS3AP22-201ENST00000488297 769 ntBASIC1.96□□□□□ -2.1
CLIP1P30622 AC114322.1-201ENST00000506771 926 ntBASIC1.96□□□□□ -2.1
CLIP1P30622 AC034244.1-201ENST00000507687 207 ntBASIC1.96□□□□□ -2.1
CLIP1P30622 AC090821.2-201ENST00000523552 176 ntBASIC1.96□□□□□ -2.1
CLIP1P30622 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.96□□□□□ -2.1
CLIP1P30622 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.96□□□□□ -2.1
CLIP1P30622 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.96□□□□□ -2.1
CLIP1P30622 AC022709.1-201ENST00000615967 87 ntBASIC1.96□□□□□ -2.1
CLIP1P30622 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.96□□□□□ -2.1
CLIP1P30622 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.96□□□□□ -2.1
CLIP1P30622 MTND4P27-201ENST00000450813 1354 ntBASIC1.96□□□□□ -2.1
CLIP1P30622 NR1H5P-201ENST00000452683 1377 ntBASIC1.96□□□□□ -2.1
CLIP1P30622 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.95□□□□□ -2.1
CLIP1P30622 ZNF33CP-201ENST00000432492 2030 ntBASIC1.95□□□□□ -2.1
CLIP1P30622 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.95□□□□□ -2.1
CLIP1P30622 RNU6-1-201ENST00000383898 107 ntBASIC1.95□□□□□ -2.1
CLIP1P30622 RNU6-42P-201ENST00000384165 107 ntBASIC1.95□□□□□ -2.1
CLIP1P30622 RNU6-36P-201ENST00000384172 107 ntBASIC1.95□□□□□ -2.1
CLIP1P30622 RNU6-4P-201ENST00000384205 107 ntBASIC1.95□□□□□ -2.1
CLIP1P30622 RNU6-5P-201ENST00000384238 107 ntBASIC1.95□□□□□ -2.1
CLIP1P30622 RNU6-3P-201ENST00000384314 107 ntBASIC1.95□□□□□ -2.1
CLIP1P30622 RNU6-2-201ENST00000384627 107 ntBASIC1.95□□□□□ -2.1
CLIP1P30622 RNU6-9-201ENST00000384776 107 ntBASIC1.95□□□□□ -2.1
CLIP1P30622 RNU6-33P-201ENST00000384793 107 ntBASIC1.95□□□□□ -2.1
CLIP1P30622 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CLIP1P30622 RPS15AP17-201ENST00000470598 390 ntBASIC1.95□□□□□ -2.1
CLIP1P30622 RN7SKP234-201ENST00000517173 224 ntBASIC1.95□□□□□ -2.1
CLIP1P30622 NDUFS5P6-201ENST00000529136 295 ntBASIC1.95□□□□□ -2.1
CLIP1P30622 AL078603.1-201ENST00000603824 313 ntBASIC1.95□□□□□ -2.1
CLIP1P30622 RNU6-6P-201ENST00000606623 107 ntBASIC1.95□□□□□ -2.1
CLIP1P30622 AC097468.3-201ENST00000607956 456 ntBASIC1.95□□□□□ -2.1
CLIP1P30622 AC021755.4-201ENST00000616620 456 ntBASIC1.95□□□□□ -2.1
CLIP1P30622 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.95□□□□□ -2.1
CLIP1P30622 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CLIP1P30622 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CLIP1P30622 SNORD114-26-201ENST00000363543 72 ntBASIC1.94□□□□□ -2.1
CLIP1P30622 MTATP6P4-201ENST00000427725 675 ntBASIC1.94□□□□□ -2.1
CLIP1P30622 CALM1P1-201ENST00000442082 433 ntBASIC1.94□□□□□ -2.1
CLIP1P30622 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CLIP1P30622 RPS15AP34-201ENST00000487776 387 ntBASIC1.94□□□□□ -2.1
CLIP1P30622 HMGB3P17-201ENST00000504195 649 ntBASIC1.94□□□□□ -2.1
CLIP1P30622 OSBPL9P3-201ENST00000534523 595 ntBASIC1.94□□□□□ -2.1
CLIP1P30622 AL121839.1-201ENST00000556233 1185 ntBASIC1.94□□□□□ -2.1
CLIP1P30622 AC009127.3-201ENST00000570531 403 ntBASIC1.94□□□□□ -2.1
CLIP1P30622 AC073413.2-201ENST00000604332 360 ntBASIC1.94□□□□□ -2.1
CLIP1P30622 MIR7974-201ENST00000615835 79 ntBASIC1.94□□□□□ -2.1
CLIP1P30622 AC006338.1-201ENST00000618453 749 ntBASIC1.94□□□□□ -2.1
CLIP1P30622 PVT1_3.1-201ENST00000620853 95 ntBASIC1.94□□□□□ -2.1
CLIP1P30622 AC012640.5-201ENST00000623897 319 ntBASIC1.94□□□□□ -2.1
CLIP1P30622 MIR6767-201ENST00000637302 66 ntBASIC1.94□□□□□ -2.1
CLIP1P30622 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
CLIP1P30622 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC1.93□□□□□ -2.1
CLIP1P30622 RNU6-1080P-201ENST00000383982 107 ntBASIC1.93□□□□□ -2.1
CLIP1P30622 TRGV6-201ENST00000417928 299 ntBASIC1.93□□□□□ -2.1
CLIP1P30622 ZNF90P2-204ENST00000419323 1075 ntBASIC1.93□□□□□ -2.1
CLIP1P30622 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.93□□□□□ -2.1
CLIP1P30622 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.93□□□□□ -2.1
CLIP1P30622 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CLIP1P30622 RPS4XP11-201ENST00000446897 772 ntBASIC1.93□□□□□ -2.1
CLIP1P30622 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.93□□□□□ -2.1
CLIP1P30622 AC008526.1-201ENST00000509149 338 ntBASIC1.93□□□□□ -2.1
CLIP1P30622 AF131216.2-201ENST00000512316 564 ntBASIC1.93□□□□□ -2.1
CLIP1P30622 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.93□□□□□ -2.1
CLIP1P30622 AC024619.4-201ENST00000580924 316 ntBASIC1.93□□□□□ -2.1
CLIP1P30622 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.93□□□□□ -2.1
CLIP1P30622 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CLIP1P30622 MIR6734-201ENST00000621166 68 ntBASIC1.93□□□□□ -2.1
CLIP1P30622 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CLIP1P30622 AC099654.7-201ENST00000635788 2127 ntBASIC1.93□□□□□ -2.1
CLIP1P30622 AL033519.2-201ENST00000403958 392 ntBASIC1.92□□□□□ -2.1
CLIP1P30622 PGBD4P6-201ENST00000421501 610 ntBASIC1.92□□□□□ -2.1
CLIP1P30622 RNA5SP220-201ENST00000516298 104 ntBASIC1.92□□□□□ -2.1
CLIP1P30622 AC083923.1-201ENST00000523708 376 ntBASIC1.92□□□□□ -2.1
CLIP1P30622 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.92□□□□□ -2.1
CLIP1P30622 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CLIP1P30622 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.92□□□□□ -2.1
CLIP1P30622 AC245884.12-201ENST00000615364 59 ntBASIC1.92□□□□□ -2.1
CLIP1P30622 AP002784.2-201ENST00000397300 549 ntBASIC1.91□□□□□ -2.1
CLIP1P30622 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.91□□□□□ -2.1
CLIP1P30622 AL591034.1-201ENST00000407447 340 ntBASIC1.91□□□□□ -2.1
CLIP1P30622 PSPHP1-201ENST00000450062 261 ntBASIC1.91□□□□□ -2.1
CLIP1P30622 RPS29P23-201ENST00000458635 123 ntBASIC1.91□□□□□ -2.1
CLIP1P30622 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.91□□□□□ -2.1
CLIP1P30622 AC008885.2-201ENST00000509506 930 ntBASIC1.91□□□□□ -2.1
CLIP1P30622 AC009220.3-201ENST00000604318 586 ntBASIC1.91□□□□□ -2.1
CLIP1P30622 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
CLIP1P30622 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CLIP1P30622 SNORA46.1-201ENST00000391069 153 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 150.2 ms