Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 RPS20P2-201ENST00000402520 389 ntBASIC3.24□□□□□ -1.89
CDH3P22223 RN7SKP123-201ENST00000410732 291 ntBASIC3.24□□□□□ -1.89
CDH3P22223 RNA5SP120-201ENST00000410900 112 ntBASIC3.24□□□□□ -1.89
CDH3P22223 AC078974.1-201ENST00000411597 223 ntBASIC3.24□□□□□ -1.89
CDH3P22223 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.24□□□□□ -1.89
CDH3P22223 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.24□□□□□ -1.89
CDH3P22223 AC005326.1-201ENST00000429197 123 ntBASIC3.24□□□□□ -1.89
CDH3P22223 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.24□□□□□ -1.89
CDH3P22223 COX6CP2-201ENST00000444980 225 ntBASIC3.24□□□□□ -1.89
CDH3P22223 AP000936.2-201ENST00000447151 681 ntBASIC3.24□□□□□ -1.89
CDH3P22223 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.24□□□□□ -1.89
CDH3P22223 BX510359.1-201ENST00000456973 237 ntBASIC3.24□□□□□ -1.89
CDH3P22223 AP1S2P1-201ENST00000457344 379 ntBASIC3.24□□□□□ -1.89
CDH3P22223 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.24□□□□□ -1.89
CDH3P22223 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.24□□□□□ -1.89
CDH3P22223 SNORA70.24-201ENST00000517233 118 ntBASIC3.24□□□□□ -1.89
CDH3P22223 MTND4LP18-201ENST00000526864 291 ntBASIC3.24□□□□□ -1.89
CDH3P22223 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.24□□□□□ -1.89
CDH3P22223 AP002748.2-201ENST00000528671 348 ntBASIC3.24□□□□□ -1.89
CDH3P22223 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.24□□□□□ -1.89
CDH3P22223 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.24□□□□□ -1.89
CDH3P22223 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.24□□□□□ -1.89
CDH3P22223 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.24□□□□□ -1.89
CDH3P22223 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.24□□□□□ -1.89
CDH3P22223 AC067852.3-201ENST00000589177 561 ntBASIC3.24□□□□□ -1.89
CDH3P22223 TPMTP1-201ENST00000592307 737 ntBASIC3.24□□□□□ -1.89
CDH3P22223 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.24□□□□□ -1.89
CDH3P22223 AL158211.4-201ENST00000606988 584 ntBASIC3.24□□□□□ -1.89
CDH3P22223 AC025594.3-201ENST00000613068 790 ntBASIC3.24□□□□□ -1.89
CDH3P22223 AC025048.6-202ENST00000627667 438 ntBASIC3.24□□□□□ -1.89
CDH3P22223 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDH3P22223 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDH3P22223 MTND5P7-201ENST00000413558 1798 ntBASIC3.23□□□□□ -1.89
CDH3P22223 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CDH3P22223 RNY4P24-201ENST00000362735 96 ntBASIC3.23□□□□□ -1.89
CDH3P22223 RPL7P25-201ENST00000404151 721 ntBASIC3.23□□□□□ -1.89
CDH3P22223 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.23□□□□□ -1.89
CDH3P22223 MTCO1P39-201ENST00000426148 480 ntBASIC3.23□□□□□ -1.89
CDH3P22223 AL356583.2-201ENST00000426536 280 ntBASIC3.23□□□□□ -1.89
CDH3P22223 AC005300.1-201ENST00000428401 373 ntBASIC3.23□□□□□ -1.89
CDH3P22223 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.23□□□□□ -1.89
CDH3P22223 AC244505.4-201ENST00000434905 287 ntBASIC3.23□□□□□ -1.89
CDH3P22223 MTND1P28-201ENST00000435623 950 ntBASIC3.23□□□□□ -1.89
CDH3P22223 UBE2V1P13-201ENST00000436983 439 ntBASIC3.23□□□□□ -1.89
CDH3P22223 SSXP5-201ENST00000443473 287 ntBASIC3.23□□□□□ -1.89
CDH3P22223 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.23□□□□□ -1.89
CDH3P22223 AC008264.1-201ENST00000447612 367 ntBASIC3.23□□□□□ -1.89
CDH3P22223 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.23□□□□□ -1.89
CDH3P22223 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.23□□□□□ -1.89
CDH3P22223 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.23□□□□□ -1.89
CDH3P22223 RN7SL807P-201ENST00000470923 297 ntBASIC3.23□□□□□ -1.89
CDH3P22223 AC021205.2-201ENST00000480069 347 ntBASIC3.23□□□□□ -1.89
CDH3P22223 AC093278.1-201ENST00000494700 600 ntBASIC3.23□□□□□ -1.89
CDH3P22223 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.23□□□□□ -1.89
CDH3P22223 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.23□□□□□ -1.89
CDH3P22223 AC091965.2-201ENST00000512324 613 ntBASIC3.23□□□□□ -1.89
CDH3P22223 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.23□□□□□ -1.89
CDH3P22223 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.23□□□□□ -1.89
CDH3P22223 FABP5P5-201ENST00000515537 406 ntBASIC3.23□□□□□ -1.89
CDH3P22223 Y_RNA.695-201ENST00000516715 107 ntBASIC3.23□□□□□ -1.89
CDH3P22223 AC107934.2-201ENST00000518653 310 ntBASIC3.23□□□□□ -1.89
CDH3P22223 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.23□□□□□ -1.89
CDH3P22223 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CDH3P22223 AC007115.1-201ENST00000546853 234 ntBASIC3.23□□□□□ -1.89
CDH3P22223 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.23□□□□□ -1.89
CDH3P22223 ZNF519P3-201ENST00000557158 1032 ntBASIC3.23□□□□□ -1.89
CDH3P22223 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.23□□□□□ -1.89
CDH3P22223 AC015917.1-201ENST00000579654 510 ntBASIC3.23□□□□□ -1.89
CDH3P22223 MIR5195-201ENST00000583555 115 ntBASIC3.23□□□□□ -1.89
CDH3P22223 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.23□□□□□ -1.89
CDH3P22223 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.23□□□□□ -1.89
CDH3P22223 AL022099.1-201ENST00000604551 712 ntBASIC3.23□□□□□ -1.89
CDH3P22223 AL161756.2-201ENST00000604597 246 ntBASIC3.23□□□□□ -1.89
CDH3P22223 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.23□□□□□ -1.89
CDH3P22223 AL355472.4-201ENST00000610233 626 ntBASIC3.23□□□□□ -1.89
CDH3P22223 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.23□□□□□ -1.89
CDH3P22223 AL355810.1-201ENST00000614629 552 ntBASIC3.23□□□□□ -1.89
CDH3P22223 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.23□□□□□ -1.89
CDH3P22223 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDH3P22223 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CDH3P22223 AC090740.1-201ENST00000623193 2262 ntBASIC3.22□□□□□ -1.89
CDH3P22223 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CDH3P22223 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CDH3P22223 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.22□□□□□ -1.89
CDH3P22223 SNORA38.1-201ENST00000364172 131 ntBASIC3.22□□□□□ -1.89
CDH3P22223 U3.11-201ENST00000364476 212 ntBASIC3.22□□□□□ -1.89
CDH3P22223 RNU6-1078P-201ENST00000364522 103 ntBASIC3.22□□□□□ -1.89
CDH3P22223 CCNG1P1-201ENST00000406783 885 ntBASIC3.22□□□□□ -1.89
CDH3P22223 RPS3AP24-201ENST00000407896 734 ntBASIC3.22□□□□□ -1.89
CDH3P22223 RNU2-43P-201ENST00000410306 190 ntBASIC3.22□□□□□ -1.89
CDH3P22223 RN7SKP142-201ENST00000411236 328 ntBASIC3.22□□□□□ -1.89
CDH3P22223 CCDC58P2-201ENST00000417131 366 ntBASIC3.22□□□□□ -1.89
CDH3P22223 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.22□□□□□ -1.89
CDH3P22223 UBE2D3P2-201ENST00000424409 445 ntBASIC3.22□□□□□ -1.89
CDH3P22223 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.22□□□□□ -1.89
CDH3P22223 RPL23AP83-201ENST00000434984 473 ntBASIC3.22□□□□□ -1.89
CDH3P22223 KATNBL1P3-201ENST00000443475 909 ntBASIC3.22□□□□□ -1.89
CDH3P22223 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.22□□□□□ -1.89
CDH3P22223 RAC1P7-201ENST00000445367 377 ntBASIC3.22□□□□□ -1.89
CDH3P22223 AL360221.1-201ENST00000445989 335 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms