Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
COL5A1P20908 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.06□□□□□ -2.08
COL5A1P20908 RNF6P1-201ENST00000444889 1784 ntBASIC2.06□□□□□ -2.08
COL5A1P20908 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
COL5A1P20908 MIR378A-201ENST00000362177 66 ntBASIC2.06□□□□□ -2.08
COL5A1P20908 RNU6-666P-201ENST00000363499 107 ntBASIC2.06□□□□□ -2.08
COL5A1P20908 RNU6-353P-201ENST00000364266 108 ntBASIC2.06□□□□□ -2.08
COL5A1P20908 SNORD116.1-201ENST00000365628 92 ntBASIC2.06□□□□□ -2.08
COL5A1P20908 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.06□□□□□ -2.08
COL5A1P20908 RNU6-185P-201ENST00000384421 107 ntBASIC2.06□□□□□ -2.08
COL5A1P20908 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
COL5A1P20908 AL590084.1-201ENST00000407885 387 ntBASIC2.06□□□□□ -2.08
COL5A1P20908 MIR1303-201ENST00000408625 86 ntBASIC2.06□□□□□ -2.08
COL5A1P20908 HMGN2P35-201ENST00000412164 270 ntBASIC2.06□□□□□ -2.08
COL5A1P20908 MTND2P18-201ENST00000419962 1030 ntBASIC2.06□□□□□ -2.08
COL5A1P20908 MTND5P25-201ENST00000430499 799 ntBASIC2.06□□□□□ -2.08
COL5A1P20908 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.06□□□□□ -2.08
COL5A1P20908 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.06□□□□□ -2.08
COL5A1P20908 AL138799.3-201ENST00000438968 350 ntBASIC2.06□□□□□ -2.08
COL5A1P20908 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
COL5A1P20908 MTND2P22-201ENST00000444325 1033 ntBASIC2.06□□□□□ -2.08
COL5A1P20908 AL929288.2-201ENST00000446368 407 ntBASIC2.06□□□□□ -2.08
COL5A1P20908 AL050341.1-201ENST00000447743 313 ntBASIC2.06□□□□□ -2.08
COL5A1P20908 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.06□□□□□ -2.08
COL5A1P20908 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
COL5A1P20908 SNORD13-201ENST00000459299 104 ntBASIC2.06□□□□□ -2.08
COL5A1P20908 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.06□□□□□ -2.08
COL5A1P20908 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.06□□□□□ -2.08
COL5A1P20908 AC026414.1-201ENST00000504046 698 ntBASIC2.06□□□□□ -2.08
COL5A1P20908 MTATP6P22-201ENST00000507369 598 ntBASIC2.06□□□□□ -2.08
COL5A1P20908 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC2.06□□□□□ -2.08
COL5A1P20908 AC025881.1-201ENST00000518851 512 ntBASIC2.06□□□□□ -2.08
COL5A1P20908 AC135279.1-201ENST00000543493 504 ntBASIC2.06□□□□□ -2.08
COL5A1P20908 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.06□□□□□ -2.08
COL5A1P20908 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.06□□□□□ -2.08
COL5A1P20908 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.06□□□□□ -2.08
COL5A1P20908 MIR5708-201ENST00000579723 85 ntBASIC2.06□□□□□ -2.08
COL5A1P20908 AC021749.1-201ENST00000604322 607 ntBASIC2.06□□□□□ -2.08
COL5A1P20908 BNIP3P4-201ENST00000604946 565 ntBASIC2.06□□□□□ -2.08
COL5A1P20908 AL158042.1-201ENST00000605338 460 ntBASIC2.06□□□□□ -2.08
COL5A1P20908 Z99289.3-201ENST00000605586 594 ntBASIC2.06□□□□□ -2.08
COL5A1P20908 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
COL5A1P20908 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.06□□□□□ -2.08
COL5A1P20908 AC015726.3-201ENST00000624501 418 ntBASIC2.06□□□□□ -2.08
COL5A1P20908 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.06□□□□□ -2.08
COL5A1P20908 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.06□□□□□ -2.08
COL5A1P20908 Y_RNA.122-201ENST00000363331 96 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 RNU4-92P-201ENST00000363783 136 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 RNA5SP189-201ENST00000364920 115 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 MIR320B1-201ENST00000390209 79 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 Y_RNA.578-201ENST00000390903 88 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 MTND4P13-201ENST00000402078 1023 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
COL5A1P20908 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.05□□□□□ -2.08
COL5A1P20908 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.05□□□□□ -2.08
COL5A1P20908 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.05□□□□□ -2.08
COL5A1P20908 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.05□□□□□ -2.08
COL5A1P20908 AC004866.2-201ENST00000438285 481 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 AL008629.1-201ENST00000438615 184 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.05□□□□□ -2.08
COL5A1P20908 AC079776.3-201ENST00000450665 370 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 ANKRD26P4-201ENST00000455755 950 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 AL122001.1-201ENST00000457027 370 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 RNU7-140P-201ENST00000459546 60 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.05□□□□□ -2.08
COL5A1P20908 MTCO3P35-201ENST00000485582 781 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
COL5A1P20908 AC098799.2-201ENST00000509466 868 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 MTND5P4-201ENST00000514978 288 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.05□□□□□ -2.08
COL5A1P20908 AC060766.3-201ENST00000591442 263 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 AC013468.1-201ENST00000608680 598 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 AP000238.1-201ENST00000608759 426 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 AC092954.1-201ENST00000609121 445 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 AC022079.1-201ENST00000621546 602 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 AC078883.4-201ENST00000623218 367 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 AC068057.2-201ENST00000624047 895 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 AC079416.3-201ENST00000624479 549 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 AC090897.3-201ENST00000636973 1157 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 AC007671.2-201ENST00000637344 619 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 AL118496.1-201ENST00000440201 1812 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 AC110774.1-201ENST00000623567 2018 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.05□□□□□ -2.08
COL5A1P20908 MTND4P8-201ENST00000514997 1362 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 RNU6-1339P-201ENST00000363574 91 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 MIR513B-201ENST00000385136 84 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 FGF7P8-201ENST00000402994 292 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 BTBD10P2-201ENST00000404779 676 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.05□□□□□ -2.08
COL5A1P20908 AL353729.1-201ENST00000425044 720 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 AL593851.1-201ENST00000426171 157 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.05□□□□□ -2.08
COL5A1P20908 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.05□□□□□ -2.08
COL5A1P20908 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.05□□□□□ -2.08
COL5A1P20908 MTCO1P42-201ENST00000457379 726 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 NAP1L1P3-201ENST00000462291 880 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 AC012181.1-201ENST00000479895 423 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 AC091860.1-201ENST00000505723 432 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 MTND4LP22-201ENST00000508209 276 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 AC104108.1-201ENST00000509930 412 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms