Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.24□□□□□ -1.89
PDGFRAP16234 MTCYBP35-201ENST00000503630 1137 ntBASIC3.24□□□□□ -1.89
PDGFRAP16234 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.24□□□□□ -1.89
PDGFRAP16234 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.24□□□□□ -1.89
PDGFRAP16234 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.24□□□□□ -1.89
PDGFRAP16234 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.24□□□□□ -1.89
PDGFRAP16234 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.24□□□□□ -1.89
PDGFRAP16234 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.24□□□□□ -1.89
PDGFRAP16234 AC068657.1-201ENST00000520807 306 ntBASIC3.24□□□□□ -1.89
PDGFRAP16234 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.24□□□□□ -1.89
PDGFRAP16234 AC124947.2-202ENST00000552735 133 ntBASIC3.24□□□□□ -1.89
PDGFRAP16234 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.24□□□□□ -1.89
PDGFRAP16234 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.24□□□□□ -1.89
PDGFRAP16234 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.24□□□□□ -1.89
PDGFRAP16234 MIR4307-201ENST00000582802 84 ntBASIC3.24□□□□□ -1.89
PDGFRAP16234 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
PDGFRAP16234 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.24□□□□□ -1.89
PDGFRAP16234 AC013553.2-201ENST00000604244 589 ntBASIC3.24□□□□□ -1.89
PDGFRAP16234 AC107214.2-201ENST00000608204 634 ntBASIC3.24□□□□□ -1.89
PDGFRAP16234 AL355816.2-201ENST00000610049 647 ntBASIC3.24□□□□□ -1.89
PDGFRAP16234 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.24□□□□□ -1.89
PDGFRAP16234 AC012150.2-201ENST00000621300 544 ntBASIC3.24□□□□□ -1.89
PDGFRAP16234 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.24□□□□□ -1.89
PDGFRAP16234 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.24□□□□□ -1.89
PDGFRAP16234 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.24□□□□□ -1.89
PDGFRAP16234 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PDGFRAP16234 AC092125.1-201ENST00000562568 1995 ntBASIC3.23□□□□□ -1.89
PDGFRAP16234 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PDGFRAP16234 TPTE2P4-201ENST00000258589 1605 ntBASIC3.23□□□□□ -1.89
PDGFRAP16234 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
PDGFRAP16234 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PDGFRAP16234 MIR148B-201ENST00000362252 99 ntBASIC3.23□□□□□ -1.89
PDGFRAP16234 RNU6-660P-201ENST00000364566 109 ntBASIC3.23□□□□□ -1.89
PDGFRAP16234 MIR128-1-201ENST00000384921 82 ntBASIC3.23□□□□□ -1.89
PDGFRAP16234 TAS2R15P-201ENST00000390674 928 ntBASIC3.23□□□□□ -1.89
PDGFRAP16234 SNORD67-201ENST00000390833 111 ntBASIC3.23□□□□□ -1.89
PDGFRAP16234 SNORA48.2-201ENST00000390926 124 ntBASIC3.23□□□□□ -1.89
PDGFRAP16234 MTND5P27-201ENST00000428871 1720 ntBASIC3.23□□□□□ -1.89
PDGFRAP16234 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.23□□□□□ -1.89
PDGFRAP16234 SETP8-201ENST00000435341 628 ntBASIC3.23□□□□□ -1.89
PDGFRAP16234 LARP1BP3-201ENST00000437229 869 ntBASIC3.23□□□□□ -1.89
PDGFRAP16234 MTCYBP39-201ENST00000437562 491 ntBASIC3.23□□□□□ -1.89
PDGFRAP16234 FTH1P1-201ENST00000437933 532 ntBASIC3.23□□□□□ -1.89
PDGFRAP16234 AC016696.1-201ENST00000446949 318 ntBASIC3.23□□□□□ -1.89
PDGFRAP16234 MTND2P24-201ENST00000453434 806 ntBASIC3.23□□□□□ -1.89
PDGFRAP16234 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.23□□□□□ -1.89
PDGFRAP16234 RPS20P20-201ENST00000460498 340 ntBASIC3.23□□□□□ -1.89
PDGFRAP16234 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.23□□□□□ -1.89
PDGFRAP16234 AC006445.2-201ENST00000510061 472 ntBASIC3.23□□□□□ -1.89
PDGFRAP16234 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.23□□□□□ -1.89
PDGFRAP16234 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.23□□□□□ -1.89
PDGFRAP16234 LRRC34P1-201ENST00000542742 915 ntBASIC3.23□□□□□ -1.89
PDGFRAP16234 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.23□□□□□ -1.89
PDGFRAP16234 AL355836.1-201ENST00000555951 870 ntBASIC3.23□□□□□ -1.89
PDGFRAP16234 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.23□□□□□ -1.89
PDGFRAP16234 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.23□□□□□ -1.89
PDGFRAP16234 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.23□□□□□ -1.89
PDGFRAP16234 AC131159.1-201ENST00000621854 213 ntBASIC3.23□□□□□ -1.89
PDGFRAP16234 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
PDGFRAP16234 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
PDGFRAP16234 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.23□□□□□ -1.89
PDGFRAP16234 AL353743.1-202ENST00000431724 1695 ntBASIC3.23□□□□□ -1.89
PDGFRAP16234 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PDGFRAP16234 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PDGFRAP16234 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.22□□□□□ -1.89
PDGFRAP16234 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PDGFRAP16234 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.22□□□□□ -1.89
PDGFRAP16234 RNU6-500P-201ENST00000362349 107 ntBASIC3.22□□□□□ -1.89
PDGFRAP16234 DYNLT3P1-201ENST00000378574 347 ntBASIC3.22□□□□□ -1.89
PDGFRAP16234 RNU5A-2P-201ENST00000384337 116 ntBASIC3.22□□□□□ -1.89
PDGFRAP16234 AL109755.1-201ENST00000401791 649 ntBASIC3.22□□□□□ -1.89
PDGFRAP16234 RPL7P25-201ENST00000404151 721 ntBASIC3.22□□□□□ -1.89
PDGFRAP16234 TXNP7-201ENST00000406296 293 ntBASIC3.22□□□□□ -1.89
PDGFRAP16234 RPL5P18-201ENST00000406671 891 ntBASIC3.22□□□□□ -1.89
PDGFRAP16234 AC011233.1-201ENST00000422812 283 ntBASIC3.22□□□□□ -1.89
PDGFRAP16234 AC104332.2-201ENST00000429959 156 ntBASIC3.22□□□□□ -1.89
PDGFRAP16234 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.22□□□□□ -1.89
PDGFRAP16234 RPS15AP36-201ENST00000492022 382 ntBASIC3.22□□□□□ -1.89
PDGFRAP16234 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
PDGFRAP16234 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.22□□□□□ -1.89
PDGFRAP16234 CDC42P4-201ENST00000510507 563 ntBASIC3.22□□□□□ -1.89
PDGFRAP16234 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.22□□□□□ -1.89
PDGFRAP16234 RNU6-1256P-201ENST00000516539 103 ntBASIC3.22□□□□□ -1.89
PDGFRAP16234 RNU6-840P-201ENST00000517275 65 ntBASIC3.22□□□□□ -1.89
PDGFRAP16234 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.22□□□□□ -1.89
PDGFRAP16234 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.22□□□□□ -1.89
PDGFRAP16234 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.22□□□□□ -1.89
PDGFRAP16234 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.22□□□□□ -1.89
PDGFRAP16234 AL133153.1-201ENST00000557756 303 ntBASIC3.22□□□□□ -1.89
PDGFRAP16234 AC005951.2-201ENST00000576282 495 ntBASIC3.22□□□□□ -1.89
PDGFRAP16234 MIR3609-201ENST00000582661 80 ntBASIC3.22□□□□□ -1.89
PDGFRAP16234 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.22□□□□□ -1.89
PDGFRAP16234 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.22□□□□□ -1.89
PDGFRAP16234 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.22□□□□□ -1.89
PDGFRAP16234 AC005000.2-201ENST00000605468 310 ntBASIC3.22□□□□□ -1.89
PDGFRAP16234 AC091965.4-201ENST00000607691 587 ntBASIC3.22□□□□□ -1.89
PDGFRAP16234 AC004908.2-201ENST00000609090 574 ntBASIC3.22□□□□□ -1.89
PDGFRAP16234 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.22□□□□□ -1.89
PDGFRAP16234 AL162274.2-201ENST00000614406 332 ntBASIC3.22□□□□□ -1.89
PDGFRAP16234 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms