Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 RN7SL75P-201ENST00000461926 281 ntBASIC3.21□□□□□ -1.9
CLPTM1O96005 AC108860.1-201ENST00000484521 383 ntBASIC3.21□□□□□ -1.9
CLPTM1O96005 MTND1P3-201ENST00000484956 952 ntBASIC3.21□□□□□ -1.9
CLPTM1O96005 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.21□□□□□ -1.9
CLPTM1O96005 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
CLPTM1O96005 RNA5SP217-201ENST00000515959 91 ntBASIC3.21□□□□□ -1.9
CLPTM1O96005 RNU1-143P-201ENST00000516296 146 ntBASIC3.21□□□□□ -1.9
CLPTM1O96005 TRMT10BP1-201ENST00000519377 943 ntBASIC3.21□□□□□ -1.9
CLPTM1O96005 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.21□□□□□ -1.9
CLPTM1O96005 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.21□□□□□ -1.9
CLPTM1O96005 AC010546.1-201ENST00000569391 485 ntBASIC3.21□□□□□ -1.9
CLPTM1O96005 EIF1P4-201ENST00000572664 335 ntBASIC3.21□□□□□ -1.9
CLPTM1O96005 MTCO3P24-201ENST00000572729 782 ntBASIC3.21□□□□□ -1.9
CLPTM1O96005 AC060771.1-201ENST00000582031 164 ntBASIC3.21□□□□□ -1.9
CLPTM1O96005 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.21□□□□□ -1.9
CLPTM1O96005 AL355812.1-201ENST00000603215 216 ntBASIC3.21□□□□□ -1.9
CLPTM1O96005 AL359999.1-201ENST00000604513 294 ntBASIC3.21□□□□□ -1.9
CLPTM1O96005 AL355472.4-201ENST00000610233 626 ntBASIC3.21□□□□□ -1.9
CLPTM1O96005 U1.23-201ENST00000610293 146 ntBASIC3.21□□□□□ -1.9
CLPTM1O96005 AC091834.1-201ENST00000614543 472 ntBASIC3.21□□□□□ -1.9
CLPTM1O96005 RNU1-68P-201ENST00000615382 146 ntBASIC3.21□□□□□ -1.9
CLPTM1O96005 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.21□□□□□ -1.9
CLPTM1O96005 AC012150.2-201ENST00000621300 544 ntBASIC3.21□□□□□ -1.9
CLPTM1O96005 U1.39-201ENST00000621562 146 ntBASIC3.21□□□□□ -1.9
CLPTM1O96005 AC039056.2-201ENST00000622261 511 ntBASIC3.21□□□□□ -1.9
CLPTM1O96005 CR381572.1-201ENST00000625098 102 ntBASIC3.21□□□□□ -1.9
CLPTM1O96005 AC027514.1-201ENST00000588561 1603 ntBASIC3.21□□□□□ -1.9
CLPTM1O96005 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.21□□□□□ -1.9
CLPTM1O96005 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLPTM1O96005 API5P2-201ENST00000397055 1498 ntBASIC3.21□□□□□ -1.9
CLPTM1O96005 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CLPTM1O96005 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.2□□□□□ -1.9
CLPTM1O96005 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CLPTM1O96005 U8.3-201ENST00000363321 132 ntBASIC3.2□□□□□ -1.9
CLPTM1O96005 RNU6-114P-201ENST00000384704 105 ntBASIC3.2□□□□□ -1.9
CLPTM1O96005 U3.20-201ENST00000390909 217 ntBASIC3.2□□□□□ -1.9
CLPTM1O96005 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.2□□□□□ -1.9
CLPTM1O96005 RNU4-65P-201ENST00000410473 140 ntBASIC3.2□□□□□ -1.9
CLPTM1O96005 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.2□□□□□ -1.9
CLPTM1O96005 RAB9AP3-201ENST00000412737 573 ntBASIC3.2□□□□□ -1.9
CLPTM1O96005 BMS1P22-201ENST00000414726 313 ntBASIC3.2□□□□□ -1.9
CLPTM1O96005 RPL32P35-201ENST00000415214 394 ntBASIC3.2□□□□□ -1.9
CLPTM1O96005 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CLPTM1O96005 C1DP2-201ENST00000418167 426 ntBASIC3.2□□□□□ -1.9
CLPTM1O96005 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.2□□□□□ -1.9
CLPTM1O96005 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.2□□□□□ -1.9
CLPTM1O96005 AC112653.1-201ENST00000443851 386 ntBASIC3.2□□□□□ -1.9
CLPTM1O96005 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.2□□□□□ -1.9
CLPTM1O96005 RAB9AP1-201ENST00000449393 573 ntBASIC3.2□□□□□ -1.9
CLPTM1O96005 GAPDHP17-201ENST00000449858 1001 ntBASIC3.2□□□□□ -1.9
CLPTM1O96005 AC140076.1-201ENST00000449897 361 ntBASIC3.2□□□□□ -1.9
CLPTM1O96005 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.2□□□□□ -1.9
CLPTM1O96005 AP1S2P1-201ENST00000457344 379 ntBASIC3.2□□□□□ -1.9
CLPTM1O96005 SRRM1P2-201ENST00000464531 1192 ntBASIC3.2□□□□□ -1.9
CLPTM1O96005 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.2□□□□□ -1.9
CLPTM1O96005 RN7SKP282-201ENST00000516824 299 ntBASIC3.2□□□□□ -1.9
CLPTM1O96005 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.2□□□□□ -1.9
CLPTM1O96005 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.2□□□□□ -1.9
CLPTM1O96005 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CLPTM1O96005 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.2□□□□□ -1.9
CLPTM1O96005 SETP7-201ENST00000552169 453 ntBASIC3.2□□□□□ -1.9
CLPTM1O96005 MIR5187-201ENST00000583479 76 ntBASIC3.2□□□□□ -1.9
CLPTM1O96005 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.2□□□□□ -1.9
CLPTM1O96005 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.2□□□□□ -1.9
CLPTM1O96005 AC012669.1-201ENST00000603209 283 ntBASIC3.2□□□□□ -1.9
CLPTM1O96005 AC009159.1-201ENST00000618386 642 ntBASIC3.2□□□□□ -1.9
CLPTM1O96005 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CLPTM1O96005 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CLPTM1O96005 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.2□□□□□ -1.9
CLPTM1O96005 AC010149.2-201ENST00000637608 315 ntBASIC3.2□□□□□ -1.9
CLPTM1O96005 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CLPTM1O96005 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CLPTM1O96005 ZNF285B-201ENST00000561698 1767 ntBASIC3.2□□□□□ -1.9
CLPTM1O96005 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CLPTM1O96005 AC092435.3-201ENST00000565538 3654 ntBASIC3.19□□□□□ -1.9
CLPTM1O96005 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.19□□□□□ -1.9
CLPTM1O96005 GNG5P1-201ENST00000255500 204 ntBASIC3.19□□□□□ -1.9
CLPTM1O96005 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CLPTM1O96005 SNORA62.3-201ENST00000365110 153 ntBASIC3.19□□□□□ -1.9
CLPTM1O96005 RNU6-359P-201ENST00000365466 108 ntBASIC3.19□□□□□ -1.9
CLPTM1O96005 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.19□□□□□ -1.9
CLPTM1O96005 AL591034.1-201ENST00000407447 340 ntBASIC3.19□□□□□ -1.9
CLPTM1O96005 SNORA11-201ENST00000408789 128 ntBASIC3.19□□□□□ -1.9
CLPTM1O96005 RNU6-648P-201ENST00000410190 107 ntBASIC3.19□□□□□ -1.9
CLPTM1O96005 RN7SKP27-201ENST00000410684 333 ntBASIC3.19□□□□□ -1.9
CLPTM1O96005 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.19□□□□□ -1.9
CLPTM1O96005 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.19□□□□□ -1.9
CLPTM1O96005 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.19□□□□□ -1.9
CLPTM1O96005 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.19□□□□□ -1.9
CLPTM1O96005 USP9YP36-201ENST00000424581 829 ntBASIC3.19□□□□□ -1.9
CLPTM1O96005 AL353777.1-201ENST00000425552 326 ntBASIC3.19□□□□□ -1.9
CLPTM1O96005 AL589872.1-201ENST00000426602 288 ntBASIC3.19□□□□□ -1.9
CLPTM1O96005 ISCA1P6-201ENST00000427740 390 ntBASIC3.19□□□□□ -1.9
CLPTM1O96005 OR2AS1P-201ENST00000427827 319 ntBASIC3.19□□□□□ -1.9
CLPTM1O96005 AC018644.1-201ENST00000429934 551 ntBASIC3.19□□□□□ -1.9
CLPTM1O96005 AC073614.1-201ENST00000438690 650 ntBASIC3.19□□□□□ -1.9
CLPTM1O96005 AC108734.1-201ENST00000439549 399 ntBASIC3.19□□□□□ -1.9
CLPTM1O96005 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CLPTM1O96005 AL049734.2-201ENST00000441066 616 ntBASIC3.19□□□□□ -1.9
CLPTM1O96005 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms