Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.85□□□□□ -1.95
MBD3O95983 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.85□□□□□ -1.95
MBD3O95983 RNU6-150P-201ENST00000516237 95 ntBASIC2.85□□□□□ -1.95
MBD3O95983 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
MBD3O95983 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.85□□□□□ -1.95
MBD3O95983 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.85□□□□□ -1.95
MBD3O95983 AC128657.1-201ENST00000549459 145 ntBASIC2.85□□□□□ -1.95
MBD3O95983 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.85□□□□□ -1.95
MBD3O95983 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.85□□□□□ -1.95
MBD3O95983 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.85□□□□□ -1.95
MBD3O95983 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.85□□□□□ -1.95
MBD3O95983 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.85□□□□□ -1.95
MBD3O95983 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.85□□□□□ -1.95
MBD3O95983 MTND3P19-201ENST00000603825 345 ntBASIC2.85□□□□□ -1.95
MBD3O95983 RPL23AP88-201ENST00000605759 454 ntBASIC2.85□□□□□ -1.95
MBD3O95983 AC006270.3-201ENST00000605967 1036 ntBASIC2.85□□□□□ -1.95
MBD3O95983 AC090186.1-201ENST00000605991 572 ntBASIC2.85□□□□□ -1.95
MBD3O95983 AC006213.4-201ENST00000616184 634 ntBASIC2.85□□□□□ -1.95
MBD3O95983 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.85□□□□□ -1.95
MBD3O95983 AC116618.1-201ENST00000634617 774 ntBASIC2.85□□□□□ -1.95
MBD3O95983 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.85□□□□□ -1.95
MBD3O95983 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
MBD3O95983 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
MBD3O95983 AC008669.1-201ENST00000565823 2178 ntBASIC2.84□□□□□ -1.95
MBD3O95983 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
MBD3O95983 SNORD62.1-201ENST00000362541 86 ntBASIC2.84□□□□□ -1.95
MBD3O95983 RNU6-1207P-201ENST00000384343 107 ntBASIC2.84□□□□□ -1.95
MBD3O95983 SNORA48.7-201ENST00000391302 135 ntBASIC2.84□□□□□ -1.95
MBD3O95983 SPA17P1-201ENST00000416656 452 ntBASIC2.84□□□□□ -1.95
MBD3O95983 HMGN2P30-201ENST00000423237 256 ntBASIC2.84□□□□□ -1.95
MBD3O95983 AC092573.2-201ENST00000434546 243 ntBASIC2.84□□□□□ -1.95
MBD3O95983 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.84□□□□□ -1.95
MBD3O95983 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.84□□□□□ -1.95
MBD3O95983 AC108729.1-201ENST00000487812 947 ntBASIC2.84□□□□□ -1.95
MBD3O95983 AP002812.1-201ENST00000495378 474 ntBASIC2.84□□□□□ -1.95
MBD3O95983 AL358832.1-201ENST00000497800 389 ntBASIC2.84□□□□□ -1.95
MBD3O95983 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.84□□□□□ -1.95
MBD3O95983 AC021146.8-201ENST00000507455 733 ntBASIC2.84□□□□□ -1.95
MBD3O95983 AC107222.1-201ENST00000510899 637 ntBASIC2.84□□□□□ -1.95
MBD3O95983 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.84□□□□□ -1.95
MBD3O95983 AC079600.2-201ENST00000550076 130 ntBASIC2.84□□□□□ -1.95
MBD3O95983 AC124947.2-202ENST00000552735 133 ntBASIC2.84□□□□□ -1.95
MBD3O95983 AC023813.2-201ENST00000564321 469 ntBASIC2.84□□□□□ -1.95
MBD3O95983 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.84□□□□□ -1.95
MBD3O95983 AC013553.2-201ENST00000604244 589 ntBASIC2.84□□□□□ -1.95
MBD3O95983 AL592221.1-201ENST00000605266 382 ntBASIC2.84□□□□□ -1.95
MBD3O95983 RNU4-5P-201ENST00000607255 135 ntBASIC2.84□□□□□ -1.95
MBD3O95983 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.84□□□□□ -1.95
MBD3O95983 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
MBD3O95983 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.83□□□□□ -1.96
MBD3O95983 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.83□□□□□ -1.96
MBD3O95983 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
MBD3O95983 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
MBD3O95983 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.83□□□□□ -1.96
MBD3O95983 AL356421.1-201ENST00000403255 413 ntBASIC2.83□□□□□ -1.96
MBD3O95983 USP9YP33-201ENST00000412220 421 ntBASIC2.83□□□□□ -1.96
MBD3O95983 AC092648.1-201ENST00000425870 423 ntBASIC2.83□□□□□ -1.96
MBD3O95983 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.83□□□□□ -1.96
MBD3O95983 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.83□□□□□ -1.96
MBD3O95983 USP9YP35-201ENST00000435696 412 ntBASIC2.83□□□□□ -1.96
MBD3O95983 LSM1P1-201ENST00000438629 273 ntBASIC2.83□□□□□ -1.96
MBD3O95983 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.83□□□□□ -1.96
MBD3O95983 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.83□□□□□ -1.96
MBD3O95983 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.83□□□□□ -1.96
MBD3O95983 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.83□□□□□ -1.96
MBD3O95983 SCARNA1-201ENST00000517138 166 ntBASIC2.83□□□□□ -1.96
MBD3O95983 HMGN1P28-201ENST00000521340 364 ntBASIC2.83□□□□□ -1.96
MBD3O95983 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.83□□□□□ -1.96
MBD3O95983 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.83□□□□□ -1.96
MBD3O95983 PRELID2P1-201ENST00000552837 301 ntBASIC2.83□□□□□ -1.96
MBD3O95983 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.83□□□□□ -1.96
MBD3O95983 AC012493.2-201ENST00000595083 291 ntBASIC2.83□□□□□ -1.96
MBD3O95983 RPL23AP78-201ENST00000599928 470 ntBASIC2.83□□□□□ -1.96
MBD3O95983 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.83□□□□□ -1.96
MBD3O95983 U73023.1-201ENST00000603134 700 ntBASIC2.83□□□□□ -1.96
MBD3O95983 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.83□□□□□ -1.96
MBD3O95983 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
MBD3O95983 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
MBD3O95983 AP000776.1-201ENST00000530032 1663 ntBASIC2.82□□□□□ -1.96
MBD3O95983 AL049641.1-201ENST00000441055 1948 ntBASIC2.82□□□□□ -1.96
MBD3O95983 MIR21-201ENST00000362134 72 ntBASIC2.82□□□□□ -1.96
MBD3O95983 RNU6-462P-201ENST00000362659 105 ntBASIC2.82□□□□□ -1.96
MBD3O95983 RNU6-223P-201ENST00000362830 107 ntBASIC2.82□□□□□ -1.96
MBD3O95983 RNU1-140P-201ENST00000365040 165 ntBASIC2.82□□□□□ -1.96
MBD3O95983 RNU6-1035P-201ENST00000384477 107 ntBASIC2.82□□□□□ -1.96
MBD3O95983 RNU6-925P-201ENST00000384629 104 ntBASIC2.82□□□□□ -1.96
MBD3O95983 MIR670-201ENST00000390142 98 ntBASIC2.82□□□□□ -1.96
MBD3O95983 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
MBD3O95983 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
MBD3O95983 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.82□□□□□ -1.96
MBD3O95983 SNORA11-201ENST00000408789 128 ntBASIC2.82□□□□□ -1.96
MBD3O95983 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.82□□□□□ -1.96
MBD3O95983 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.82□□□□□ -1.96
MBD3O95983 OR4K11P-201ENST00000431829 904 ntBASIC2.82□□□□□ -1.96
MBD3O95983 RPL35AP22-201ENST00000436855 335 ntBASIC2.82□□□□□ -1.96
MBD3O95983 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.82□□□□□ -1.96
MBD3O95983 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.82□□□□□ -1.96
MBD3O95983 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.82□□□□□ -1.96
MBD3O95983 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.82□□□□□ -1.96
MBD3O95983 PRSS3P4-201ENST00000453323 162 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms