Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC5.08□□□□□ -1.6
RAPGEF3O95398 AC008885.1-201ENST00000514930 301 ntBASIC5.08□□□□□ -1.6
RAPGEF3O95398 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC5.08□□□□□ -1.6
RAPGEF3O95398 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC5.08□□□□□ -1.6
RAPGEF3O95398 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RAPGEF3O95398 HMGB1P33-201ENST00000563485 527 ntBASIC5.08□□□□□ -1.6
RAPGEF3O95398 AC068135.2-201ENST00000569293 1028 ntBASIC5.08□□□□□ -1.6
RAPGEF3O95398 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC5.08□□□□□ -1.6
RAPGEF3O95398 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC5.08□□□□□ -1.6
RAPGEF3O95398 AC011451.2-201ENST00000604303 598 ntBASIC5.08□□□□□ -1.6
RAPGEF3O95398 AL590099.1-201ENST00000615276 138 ntBASIC5.08□□□□□ -1.6
RAPGEF3O95398 RDM1-219ENST00000615378 542 ntTSL 3 BASIC5.08□□□□□ -1.6
RAPGEF3O95398 AC040168.1-201ENST00000623594 991 ntBASIC5.08□□□□□ -1.6
RAPGEF3O95398 CR381572.1-201ENST00000625098 102 ntBASIC5.08□□□□□ -1.6
RAPGEF3O95398 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RAPGEF3O95398 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RAPGEF3O95398 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
RAPGEF3O95398 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.08□□□□□ -1.6
RAPGEF3O95398 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.08□□□□□ -1.6
RAPGEF3O95398 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.07□□□□□ -1.6
RAPGEF3O95398 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RAPGEF3O95398 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC5.07□□□□□ -1.6
RAPGEF3O95398 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC5.07□□□□□ -1.6
RAPGEF3O95398 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RAPGEF3O95398 RNU5E-1-201ENST00000362477 120 ntBASIC5.07□□□□□ -1.6
RAPGEF3O95398 RNY4P14-201ENST00000363656 96 ntBASIC5.07□□□□□ -1.6
RAPGEF3O95398 U3.15-201ENST00000365398 212 ntBASIC5.07□□□□□ -1.6
RAPGEF3O95398 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
RAPGEF3O95398 MIR153-1-201ENST00000384914 90 ntBASIC5.07□□□□□ -1.6
RAPGEF3O95398 CALM2P3-201ENST00000400429 449 ntBASIC5.07□□□□□ -1.6
RAPGEF3O95398 RN7SKP285-201ENST00000410137 318 ntBASIC5.07□□□□□ -1.6
RAPGEF3O95398 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC5.07□□□□□ -1.6
RAPGEF3O95398 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.07□□□□□ -1.6
RAPGEF3O95398 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RAPGEF3O95398 USP9YP15-201ENST00000442391 422 ntBASIC5.07□□□□□ -1.6
RAPGEF3O95398 AL590399.6-201ENST00000446396 307 ntBASIC5.07□□□□□ -1.6
RAPGEF3O95398 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
RAPGEF3O95398 AC023194.1-201ENST00000493084 308 ntBASIC5.07□□□□□ -1.6
RAPGEF3O95398 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC5.07□□□□□ -1.6
RAPGEF3O95398 AC116353.2-201ENST00000505332 712 ntBASIC5.07□□□□□ -1.6
RAPGEF3O95398 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC5.07□□□□□ -1.6
RAPGEF3O95398 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC5.07□□□□□ -1.6
RAPGEF3O95398 AC009646.1-201ENST00000510455 318 ntBASIC5.07□□□□□ -1.6
RAPGEF3O95398 ARL2BPP6-201ENST00000512757 439 ntBASIC5.07□□□□□ -1.6
RAPGEF3O95398 AC107934.1-201ENST00000522215 217 ntBASIC5.07□□□□□ -1.6
RAPGEF3O95398 OR5AQ1P-201ENST00000527596 927 ntBASIC5.07□□□□□ -1.6
RAPGEF3O95398 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC5.07□□□□□ -1.6
RAPGEF3O95398 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC5.07□□□□□ -1.6
RAPGEF3O95398 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.07□□□□□ -1.6
RAPGEF3O95398 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.07□□□□□ -1.6
RAPGEF3O95398 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC5.07□□□□□ -1.6
RAPGEF3O95398 MIR3146-201ENST00000580367 79 ntBASIC5.07□□□□□ -1.6
RAPGEF3O95398 AL669831.4-202ENST00000590817 238 ntBASIC5.07□□□□□ -1.6
RAPGEF3O95398 AC007363.1-201ENST00000604736 620 ntBASIC5.07□□□□□ -1.6
RAPGEF3O95398 AC073657.2-201ENST00000605661 303 ntBASIC5.07□□□□□ -1.6
RAPGEF3O95398 AC091905.1-201ENST00000624400 311 ntBASIC5.07□□□□□ -1.6
RAPGEF3O95398 MIR3688-2-201ENST00000636963 87 ntBASIC5.07□□□□□ -1.6
RAPGEF3O95398 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC5.07□□□□□ -1.6
RAPGEF3O95398 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RAPGEF3O95398 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC5.07□□□□□ -1.6
RAPGEF3O95398 AC005183.1-201ENST00000603687 1979 ntBASIC5.07□□□□□ -1.6
RAPGEF3O95398 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RAPGEF3O95398 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RAPGEF3O95398 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.06□□□□□ -1.6
RAPGEF3O95398 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.06□□□□□ -1.6
RAPGEF3O95398 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RAPGEF3O95398 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RAPGEF3O95398 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RAPGEF3O95398 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RAPGEF3O95398 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC5.06□□□□□ -1.6
RAPGEF3O95398 OR5J1P-201ENST00000313544 939 ntBASIC5.06□□□□□ -1.6
RAPGEF3O95398 RNU6-181P-201ENST00000363225 107 ntBASIC5.06□□□□□ -1.6
RAPGEF3O95398 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC5.06□□□□□ -1.6
RAPGEF3O95398 MTCYBP24-201ENST00000420387 1106 ntBASIC5.06□□□□□ -1.6
RAPGEF3O95398 AC137499.1-201ENST00000427602 88 ntBASIC5.06□□□□□ -1.6
RAPGEF3O95398 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC5.06□□□□□ -1.6
RAPGEF3O95398 AL356535.1-201ENST00000440335 398 ntBASIC5.06□□□□□ -1.6
RAPGEF3O95398 RPL23AP33-201ENST00000442301 452 ntBASIC5.06□□□□□ -1.6
RAPGEF3O95398 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC5.06□□□□□ -1.6
RAPGEF3O95398 MTND2P24-201ENST00000453434 806 ntBASIC5.06□□□□□ -1.6
RAPGEF3O95398 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC5.06□□□□□ -1.6
RAPGEF3O95398 ARL4AP2-201ENST00000507378 601 ntBASIC5.06□□□□□ -1.6
RAPGEF3O95398 TMEM248P1-201ENST00000510579 951 ntBASIC5.06□□□□□ -1.6
RAPGEF3O95398 AC021146.3-201ENST00000511911 260 ntBASIC5.06□□□□□ -1.6
RAPGEF3O95398 RNU6-445P-201ENST00000516949 107 ntBASIC5.06□□□□□ -1.6
RAPGEF3O95398 AL512310.1-201ENST00000548639 172 ntBASIC5.06□□□□□ -1.6
RAPGEF3O95398 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC5.06□□□□□ -1.6
RAPGEF3O95398 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.06□□□□□ -1.6
RAPGEF3O95398 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RAPGEF3O95398 AC055876.5-201ENST00000605667 259 ntBASIC5.06□□□□□ -1.6
RAPGEF3O95398 AC104458.1-201ENST00000608243 463 ntBASIC5.06□□□□□ -1.6
RAPGEF3O95398 AC017083.3-201ENST00000609955 700 ntBASIC5.06□□□□□ -1.6
RAPGEF3O95398 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
RAPGEF3O95398 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.06□□□□□ -1.6
RAPGEF3O95398 AL008636.1-201ENST00000625038 1018 ntBASIC5.06□□□□□ -1.6
RAPGEF3O95398 AL732372.2-225ENST00000642124 456 ntBASIC5.06□□□□□ -1.6
RAPGEF3O95398 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC5.06□□□□□ -1.6
RAPGEF3O95398 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.06□□□□□ -1.6
RAPGEF3O95398 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RAPGEF3O95398 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms