Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
VAMP4O75379 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
VAMP4O75379 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VAMP4O75379 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.98□□□□□ -1.61
VAMP4O75379 AL139811.1-201ENST00000424779 2299 ntBASIC4.98□□□□□ -1.61
VAMP4O75379 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
VAMP4O75379 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
VAMP4O75379 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VAMP4O75379 RNU6-903P-201ENST00000391270 109 ntBASIC4.98□□□□□ -1.61
VAMP4O75379 RNA5SP239-201ENST00000410218 129 ntBASIC4.98□□□□□ -1.61
VAMP4O75379 RNU2-29P-201ENST00000410423 189 ntBASIC4.98□□□□□ -1.61
VAMP4O75379 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC4.98□□□□□ -1.61
VAMP4O75379 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.98□□□□□ -1.61
VAMP4O75379 AL353748.1-201ENST00000440753 474 ntBASIC4.98□□□□□ -1.61
VAMP4O75379 AC133473.1-201ENST00000455173 299 ntBASIC4.98□□□□□ -1.61
VAMP4O75379 AC087385.1-201ENST00000475062 312 ntBASIC4.98□□□□□ -1.61
VAMP4O75379 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.98□□□□□ -1.61
VAMP4O75379 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.98□□□□□ -1.61
VAMP4O75379 AC116562.3-201ENST00000506136 177 ntBASIC4.98□□□□□ -1.61
VAMP4O75379 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.98□□□□□ -1.61
VAMP4O75379 MTCO3P44-201ENST00000510977 541 ntBASIC4.98□□□□□ -1.61
VAMP4O75379 AC026726.1-201ENST00000512859 601 ntBASIC4.98□□□□□ -1.61
VAMP4O75379 RNU4-49P-201ENST00000516080 140 ntBASIC4.98□□□□□ -1.61
VAMP4O75379 RNU7-51P-201ENST00000516560 62 ntBASIC4.98□□□□□ -1.61
VAMP4O75379 SUMO2P20-201ENST00000520803 283 ntBASIC4.98□□□□□ -1.61
VAMP4O75379 AC068587.5-201ENST00000528506 175 ntBASIC4.98□□□□□ -1.61
VAMP4O75379 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.98□□□□□ -1.61
VAMP4O75379 SETP7-201ENST00000552169 453 ntBASIC4.98□□□□□ -1.61
VAMP4O75379 BNIP3P5-201ENST00000562290 498 ntBASIC4.98□□□□□ -1.61
VAMP4O75379 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.98□□□□□ -1.61
VAMP4O75379 AC113194.1-201ENST00000606037 500 ntBASIC4.98□□□□□ -1.61
VAMP4O75379 AL133255.1-201ENST00000606374 441 ntBASIC4.98□□□□□ -1.61
VAMP4O75379 AC104237.2-201ENST00000612456 443 ntBASIC4.98□□□□□ -1.61
VAMP4O75379 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.98□□□□□ -1.61
VAMP4O75379 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.98□□□□□ -1.61
VAMP4O75379 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.98□□□□□ -1.61
VAMP4O75379 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
VAMP4O75379 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VAMP4O75379 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VAMP4O75379 AC010300.1-201ENST00000600671 5134 ntBASIC4.98□□□□□ -1.61
VAMP4O75379 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VAMP4O75379 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VAMP4O75379 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
VAMP4O75379 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VAMP4O75379 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
VAMP4O75379 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.97□□□□□ -1.61
VAMP4O75379 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
VAMP4O75379 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
VAMP4O75379 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.97□□□□□ -1.61
VAMP4O75379 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
VAMP4O75379 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VAMP4O75379 Y_RNA.394-201ENST00000383942 103 ntBASIC4.97□□□□□ -1.61
VAMP4O75379 RNU6-38P-201ENST00000384085 107 ntBASIC4.97□□□□□ -1.61
VAMP4O75379 MIR30B-201ENST00000384850 88 ntBASIC4.97□□□□□ -1.61
VAMP4O75379 SNORD37.1-201ENST00000390968 65 ntBASIC4.97□□□□□ -1.61
VAMP4O75379 RNU2-39P-201ENST00000410604 198 ntBASIC4.97□□□□□ -1.61
VAMP4O75379 MTCO2P12-201ENST00000427426 682 ntBASIC4.97□□□□□ -1.61
VAMP4O75379 AC236972.2-201ENST00000434979 310 ntBASIC4.97□□□□□ -1.61
VAMP4O75379 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VAMP4O75379 AC016696.1-201ENST00000446949 318 ntBASIC4.97□□□□□ -1.61
VAMP4O75379 HMGB3P22-202ENST00000451823 572 ntBASIC4.97□□□□□ -1.61
VAMP4O75379 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.97□□□□□ -1.61
VAMP4O75379 snoU109.4-201ENST00000458953 143 ntBASIC4.97□□□□□ -1.61
VAMP4O75379 RNU6-333P-201ENST00000459117 107 ntBASIC4.97□□□□□ -1.61
VAMP4O75379 AC010469.1-201ENST00000463864 576 ntBASIC4.97□□□□□ -1.61
VAMP4O75379 AC007537.2-201ENST00000472093 511 ntBASIC4.97□□□□□ -1.61
VAMP4O75379 RN7SL323P-201ENST00000494712 295 ntBASIC4.97□□□□□ -1.61
VAMP4O75379 AC004062.1-201ENST00000509926 645 ntBASIC4.97□□□□□ -1.61
VAMP4O75379 AC026402.1-201ENST00000513642 170 ntBASIC4.97□□□□□ -1.61
VAMP4O75379 RNU6-27P-201ENST00000516146 107 ntBASIC4.97□□□□□ -1.61
VAMP4O75379 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.97□□□□□ -1.61
VAMP4O75379 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.97□□□□□ -1.61
VAMP4O75379 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.97□□□□□ -1.61
VAMP4O75379 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.97□□□□□ -1.61
VAMP4O75379 AL133153.1-201ENST00000557756 303 ntBASIC4.97□□□□□ -1.61
VAMP4O75379 AC090877.1-201ENST00000561418 344 ntBASIC4.97□□□□□ -1.61
VAMP4O75379 HSPE1P5-201ENST00000561489 272 ntBASIC4.97□□□□□ -1.61
VAMP4O75379 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.97□□□□□ -1.61
VAMP4O75379 AC005255.1-201ENST00000593748 216 ntBASIC4.97□□□□□ -1.61
VAMP4O75379 AC008638.3-201ENST00000603341 463 ntBASIC4.97□□□□□ -1.61
VAMP4O75379 AL022345.1-201ENST00000607292 135 ntBASIC4.97□□□□□ -1.61
VAMP4O75379 AP001486.3-201ENST00000615334 372 ntBASIC4.97□□□□□ -1.61
VAMP4O75379 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
VAMP4O75379 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VAMP4O75379 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.97□□□□□ -1.61
VAMP4O75379 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
VAMP4O75379 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VAMP4O75379 IPO8P1-201ENST00000455509 3109 ntBASIC4.97□□□□□ -1.61
VAMP4O75379 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VAMP4O75379 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.96□□□□□ -1.62
VAMP4O75379 Y_RNA.184-201ENST00000363884 108 ntBASIC4.96□□□□□ -1.62
VAMP4O75379 RNU4-20P-201ENST00000365601 151 ntBASIC4.96□□□□□ -1.62
VAMP4O75379 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VAMP4O75379 Y_RNA.384-201ENST00000383909 102 ntBASIC4.96□□□□□ -1.62
VAMP4O75379 SNORA3.3-201ENST00000408712 125 ntBASIC4.96□□□□□ -1.62
VAMP4O75379 RNU4-26P-201ENST00000410270 107 ntBASIC4.96□□□□□ -1.62
VAMP4O75379 Y_RNA.615-201ENST00000410769 117 ntBASIC4.96□□□□□ -1.62
VAMP4O75379 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.96□□□□□ -1.62
VAMP4O75379 OR1AA1P-201ENST00000419597 916 ntBASIC4.96□□□□□ -1.62
VAMP4O75379 RPS6P12-201ENST00000432491 726 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms