Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.16□□□□□ -2.06
UPK1AO00322 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
UPK1AO00322 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.16□□□□□ -2.06
UPK1AO00322 AC018634.1-201ENST00000437554 401 ntBASIC2.16□□□□□ -2.06
UPK1AO00322 SDCBPP1-201ENST00000440192 890 ntBASIC2.16□□□□□ -2.06
UPK1AO00322 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.16□□□□□ -2.06
UPK1AO00322 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC2.16□□□□□ -2.06
UPK1AO00322 MTND2P24-201ENST00000453434 806 ntBASIC2.16□□□□□ -2.06
UPK1AO00322 TMEM251P1-201ENST00000503717 318 ntBASIC2.16□□□□□ -2.06
UPK1AO00322 AC114322.1-201ENST00000506771 926 ntBASIC2.16□□□□□ -2.06
UPK1AO00322 MTND2P31-201ENST00000512602 616 ntBASIC2.16□□□□□ -2.06
UPK1AO00322 HSPA8P13-201ENST00000523715 472 ntBASIC2.16□□□□□ -2.06
UPK1AO00322 MTCO1P47-201ENST00000523889 1271 ntBASIC2.16□□□□□ -2.06
UPK1AO00322 AP001646.1-201ENST00000527936 915 ntBASIC2.16□□□□□ -2.06
UPK1AO00322 NDUFS5P6-201ENST00000529136 295 ntBASIC2.16□□□□□ -2.06
UPK1AO00322 AP003066.2-201ENST00000529375 555 ntBASIC2.16□□□□□ -2.06
UPK1AO00322 OR4R1P-201ENST00000529879 463 ntBASIC2.16□□□□□ -2.06
UPK1AO00322 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.16□□□□□ -2.06
UPK1AO00322 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.16□□□□□ -2.06
UPK1AO00322 AC087897.1-201ENST00000550134 156 ntBASIC2.16□□□□□ -2.06
UPK1AO00322 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.16□□□□□ -2.06
UPK1AO00322 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.16□□□□□ -2.06
UPK1AO00322 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.16□□□□□ -2.06
UPK1AO00322 AC009097.3-201ENST00000563557 1018 ntBASIC2.16□□□□□ -2.06
UPK1AO00322 AC023825.1-201ENST00000566704 1030 ntBASIC2.16□□□□□ -2.06
UPK1AO00322 AC105137.2-201ENST00000569073 466 ntBASIC2.16□□□□□ -2.06
UPK1AO00322 MYL12BP1-201ENST00000569826 507 ntBASIC2.16□□□□□ -2.06
UPK1AO00322 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.16□□□□□ -2.06
UPK1AO00322 MIR5694-201ENST00000581190 76 ntBASIC2.16□□□□□ -2.06
UPK1AO00322 MIR4672-201ENST00000583126 81 ntBASIC2.16□□□□□ -2.06
UPK1AO00322 AF131215.7-201ENST00000602443 707 ntBASIC2.16□□□□□ -2.06
UPK1AO00322 AL158211.2-201ENST00000607282 395 ntBASIC2.16□□□□□ -2.06
UPK1AO00322 AC024560.3-201ENST00000608482 349 ntBASIC2.16□□□□□ -2.06
UPK1AO00322 AC025588.4-201ENST00000615802 908 ntBASIC2.16□□□□□ -2.06
UPK1AO00322 AC006213.4-201ENST00000616184 634 ntBASIC2.16□□□□□ -2.06
UPK1AO00322 AC103798.2-201ENST00000624292 632 ntBASIC2.16□□□□□ -2.06
UPK1AO00322 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.16□□□□□ -2.06
UPK1AO00322 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.16□□□□□ -2.06
UPK1AO00322 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.16□□□□□ -2.06
UPK1AO00322 AL356473.1-201ENST00000406203 1408 ntBASIC2.16□□□□□ -2.06
UPK1AO00322 CDR1-202ENST00000625883 1485 ntBASIC2.15□□□□□ -2.06
UPK1AO00322 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
UPK1AO00322 SNORA67.1-201ENST00000364749 141 ntBASIC2.15□□□□□ -2.07
UPK1AO00322 RNU6-76P-201ENST00000384060 104 ntBASIC2.15□□□□□ -2.07
UPK1AO00322 MIR325-201ENST00000385260 98 ntBASIC2.15□□□□□ -2.07
UPK1AO00322 MIR767-201ENST00000390228 109 ntBASIC2.15□□□□□ -2.07
UPK1AO00322 Y_RNA.578-201ENST00000390903 88 ntBASIC2.15□□□□□ -2.07
UPK1AO00322 ANAPC10P1-201ENST00000395991 556 ntBASIC2.15□□□□□ -2.07
UPK1AO00322 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
UPK1AO00322 AL591416.1-201ENST00000404015 867 ntBASIC2.15□□□□□ -2.07
UPK1AO00322 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.15□□□□□ -2.07
UPK1AO00322 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.15□□□□□ -2.07
UPK1AO00322 AC013262.1-201ENST00000426710 252 ntBASIC2.15□□□□□ -2.07
UPK1AO00322 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.15□□□□□ -2.07
UPK1AO00322 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
UPK1AO00322 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.15□□□□□ -2.07
UPK1AO00322 PTGES3P1-201ENST00000439531 483 ntBASIC2.15□□□□□ -2.07
UPK1AO00322 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.15□□□□□ -2.07
UPK1AO00322 HSPE1P6-201ENST00000479457 291 ntBASIC2.15□□□□□ -2.07
UPK1AO00322 AL049874.1-201ENST00000489560 388 ntBASIC2.15□□□□□ -2.07
UPK1AO00322 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.15□□□□□ -2.07
UPK1AO00322 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.15□□□□□ -2.07
UPK1AO00322 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.15□□□□□ -2.07
UPK1AO00322 RNU6-928P-201ENST00000516876 104 ntBASIC2.15□□□□□ -2.07
UPK1AO00322 AC087808.1-201ENST00000520501 361 ntBASIC2.15□□□□□ -2.07
UPK1AO00322 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
UPK1AO00322 AC087276.1-201ENST00000529659 480 ntBASIC2.15□□□□□ -2.07
UPK1AO00322 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.15□□□□□ -2.07
UPK1AO00322 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.15□□□□□ -2.07
UPK1AO00322 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.15□□□□□ -2.07
UPK1AO00322 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.15□□□□□ -2.07
UPK1AO00322 AC090615.1-201ENST00000577519 154 ntBASIC2.15□□□□□ -2.07
UPK1AO00322 AL022067.1-201ENST00000602426 454 ntBASIC2.15□□□□□ -2.07
UPK1AO00322 AL136363.1-201ENST00000605349 337 ntBASIC2.15□□□□□ -2.07
UPK1AO00322 AC013562.2-201ENST00000611632 603 ntBASIC2.15□□□□□ -2.07
UPK1AO00322 AL450472.3-201ENST00000615578 367 ntBASIC2.15□□□□□ -2.07
UPK1AO00322 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.15□□□□□ -2.07
UPK1AO00322 AC009159.1-201ENST00000618386 642 ntBASIC2.15□□□□□ -2.07
UPK1AO00322 AC008443.7-201ENST00000622195 246 ntBASIC2.15□□□□□ -2.07
UPK1AO00322 AC025034.2-201ENST00000623264 286 ntBASIC2.15□□□□□ -2.07
UPK1AO00322 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.15□□□□□ -2.07
UPK1AO00322 AC120349.2-201ENST00000625002 298 ntBASIC2.15□□□□□ -2.07
UPK1AO00322 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
UPK1AO00322 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.15□□□□□ -2.07
UPK1AO00322 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
UPK1AO00322 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
UPK1AO00322 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
UPK1AO00322 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
UPK1AO00322 AC131280.1-202ENST00000624067 4211 ntBASIC2.14□□□□□ -2.07
UPK1AO00322 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
UPK1AO00322 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
UPK1AO00322 RNU6-28P-201ENST00000362378 107 ntBASIC2.14□□□□□ -2.07
UPK1AO00322 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
UPK1AO00322 MIR144-201ENST00000384886 86 ntBASIC2.14□□□□□ -2.07
UPK1AO00322 RNU6-193P-201ENST00000410977 107 ntBASIC2.14□□□□□ -2.07
UPK1AO00322 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.14□□□□□ -2.07
UPK1AO00322 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.14□□□□□ -2.07
UPK1AO00322 AL512844.2-201ENST00000433990 593 ntBASIC2.14□□□□□ -2.07
UPK1AO00322 TAAR7P-201ENST00000436141 242 ntBASIC2.14□□□□□ -2.07
UPK1AO00322 USP9YP22-201ENST00000438971 294 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms