Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC188H7C350 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC188H7C350 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC188H7C350 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC188H7C350 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC188H7C350 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC188H7C350 RNU6-741P-201ENST00000383889 107 ntBASIC3.2□□□□□ -1.9
CCDC188H7C350 RNA5SP252-201ENST00000391131 119 ntBASIC3.2□□□□□ -1.9
CCDC188H7C350 RN7SKP140-201ENST00000411196 284 ntBASIC3.2□□□□□ -1.9
CCDC188H7C350 RAB9AP3-201ENST00000412737 573 ntBASIC3.2□□□□□ -1.9
CCDC188H7C350 BX323014.1-201ENST00000412876 237 ntBASIC3.2□□□□□ -1.9
CCDC188H7C350 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC188H7C350 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC188H7C350 RPL21P40-201ENST00000428586 483 ntBASIC3.2□□□□□ -1.9
CCDC188H7C350 YME1L1P1-201ENST00000429435 297 ntBASIC3.2□□□□□ -1.9
CCDC188H7C350 OR2B8P-201ENST00000432841 938 ntBASIC3.2□□□□□ -1.9
CCDC188H7C350 LARP1BP3-201ENST00000437229 869 ntBASIC3.2□□□□□ -1.9
CCDC188H7C350 PIGFP3-201ENST00000441918 722 ntBASIC3.2□□□□□ -1.9
CCDC188H7C350 RAB9AP1-201ENST00000449393 573 ntBASIC3.2□□□□□ -1.9
CCDC188H7C350 AC108059.3-201ENST00000456388 214 ntBASIC3.2□□□□□ -1.9
CCDC188H7C350 AL139824.2-201ENST00000458731 1095 ntBASIC3.2□□□□□ -1.9
CCDC188H7C350 RPL37P6-201ENST00000460682 294 ntBASIC3.2□□□□□ -1.9
CCDC188H7C350 MTND4LP3-201ENST00000468320 276 ntBASIC3.2□□□□□ -1.9
CCDC188H7C350 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC188H7C350 PAICSP4-201ENST00000517543 1253 ntBASIC3.2□□□□□ -1.9
CCDC188H7C350 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC188H7C350 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC188H7C350 HSPE1P7-201ENST00000604681 321 ntBASIC3.2□□□□□ -1.9
CCDC188H7C350 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC188H7C350 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC188H7C350 AC006927.3-201ENST00000638789 384 ntBASIC3.2□□□□□ -1.9
CCDC188H7C350 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC188H7C350 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.2□□□□□ -1.9
CCDC188H7C350 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC188H7C350 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC188H7C350 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
CCDC188H7C350 RNA5SP124-201ENST00000362739 110 ntBASIC3.19□□□□□ -1.9
CCDC188H7C350 RNU5A-8P-201ENST00000364102 114 ntBASIC3.19□□□□□ -1.9
CCDC188H7C350 SNORA48.8-201ENST00000391324 134 ntBASIC3.19□□□□□ -1.9
CCDC188H7C350 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC188H7C350 RPL7P25-201ENST00000404151 721 ntBASIC3.19□□□□□ -1.9
CCDC188H7C350 RNA5SP344-201ENST00000411081 104 ntBASIC3.19□□□□□ -1.9
CCDC188H7C350 AC093151.1-201ENST00000427711 313 ntBASIC3.19□□□□□ -1.9
CCDC188H7C350 UBE2D3P1-201ENST00000436669 444 ntBASIC3.19□□□□□ -1.9
CCDC188H7C350 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC188H7C350 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC188H7C350 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC188H7C350 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC188H7C350 AC055855.1-201ENST00000489563 579 ntBASIC3.19□□□□□ -1.9
CCDC188H7C350 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC188H7C350 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.19□□□□□ -1.9
CCDC188H7C350 AC083760.1-201ENST00000589621 670 ntBASIC3.19□□□□□ -1.9
CCDC188H7C350 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC188H7C350 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC188H7C350 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC188H7C350 Z99289.3-201ENST00000605586 594 ntBASIC3.19□□□□□ -1.9
CCDC188H7C350 AC018638.7-201ENST00000605836 1114 ntBASIC3.19□□□□□ -1.9
CCDC188H7C350 AL355365.1-201ENST00000616480 294 ntBASIC3.19□□□□□ -1.9
CCDC188H7C350 AC084035.1-201ENST00000634543 607 ntBASIC3.19□□□□□ -1.9
CCDC188H7C350 AC097655.1-201ENST00000635075 318 ntBASIC3.19□□□□□ -1.9
CCDC188H7C350 AL445523.1-201ENST00000451184 1362 ntBASIC3.19□□□□□ -1.9
CCDC188H7C350 AC007785.2-201ENST00000598627 1916 ntBASIC3.19□□□□□ -1.9
CCDC188H7C350 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC188H7C350 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC188H7C350 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC188H7C350 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC188H7C350 RNU5F-6P-201ENST00000362979 116 ntBASIC3.18□□□□□ -1.9
CCDC188H7C350 Y_RNA.169-201ENST00000363745 96 ntBASIC3.18□□□□□ -1.9
CCDC188H7C350 RNA5SP387-201ENST00000364226 106 ntBASIC3.18□□□□□ -1.9
CCDC188H7C350 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CCDC188H7C350 MIR7-3-201ENST00000384898 110 ntBASIC3.18□□□□□ -1.9
CCDC188H7C350 MTCYBP36-201ENST00000404146 440 ntBASIC3.18□□□□□ -1.9
CCDC188H7C350 AC063979.1-201ENST00000415539 377 ntBASIC3.18□□□□□ -1.9
CCDC188H7C350 BTF3L4P3-201ENST00000418879 476 ntBASIC3.18□□□□□ -1.9
CCDC188H7C350 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC188H7C350 MED14P1-201ENST00000430517 648 ntBASIC3.18□□□□□ -1.9
CCDC188H7C350 RPL23AP69-201ENST00000431134 458 ntBASIC3.18□□□□□ -1.9
CCDC188H7C350 AL365184.2-201ENST00000431139 435 ntBASIC3.18□□□□□ -1.9
CCDC188H7C350 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC188H7C350 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC188H7C350 CBWD4P-201ENST00000445695 655 ntBASIC3.18□□□□□ -1.9
CCDC188H7C350 AL133217.1-201ENST00000450980 425 ntBASIC3.18□□□□□ -1.9
CCDC188H7C350 ART2BP-201ENST00000453501 499 ntBASIC3.18□□□□□ -1.9
CCDC188H7C350 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC188H7C350 RPL21P41-201ENST00000459863 264 ntBASIC3.18□□□□□ -1.9
CCDC188H7C350 AC104472.2-201ENST00000469035 601 ntBASIC3.18□□□□□ -1.9
CCDC188H7C350 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC188H7C350 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC188H7C350 RPF2P2-201ENST00000504693 896 ntBASIC3.18□□□□□ -1.9
CCDC188H7C350 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.18□□□□□ -1.9
CCDC188H7C350 AC098862.1-201ENST00000504991 413 ntBASIC3.18□□□□□ -1.9
CCDC188H7C350 AC110794.1-201ENST00000505816 425 ntBASIC3.18□□□□□ -1.9
CCDC188H7C350 AC111000.2-201ENST00000507775 550 ntBASIC3.18□□□□□ -1.9
CCDC188H7C350 CDC42P4-201ENST00000510507 563 ntBASIC3.18□□□□□ -1.9
CCDC188H7C350 RNU6-759P-201ENST00000516740 103 ntBASIC3.18□□□□□ -1.9
CCDC188H7C350 DEFB108A-201ENST00000530110 222 ntBASIC3.18□□□□□ -1.9
CCDC188H7C350 AP000889.1-201ENST00000530968 660 ntBASIC3.18□□□□□ -1.9
CCDC188H7C350 AC123904.3-201ENST00000547218 814 ntBASIC3.18□□□□□ -1.9
CCDC188H7C350 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.18□□□□□ -1.9
CCDC188H7C350 ELOCP35-201ENST00000604289 336 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms