Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 RNU6-1304P-201ENST00000411374 106 ntBASIC5.82□□□□□ -1.48
COL17A1Q9UMD9 TPMTP2-201ENST00000414372 726 ntBASIC5.82□□□□□ -1.48
COL17A1Q9UMD9 RPS23P10-201ENST00000416185 486 ntBASIC5.82□□□□□ -1.48
COL17A1Q9UMD9 ELOCP4-201ENST00000420090 333 ntBASIC5.82□□□□□ -1.48
COL17A1Q9UMD9 AC022022.1-201ENST00000430304 178 ntBASIC5.82□□□□□ -1.48
COL17A1Q9UMD9 SEPT14P3-201ENST00000439401 183 ntBASIC5.82□□□□□ -1.48
COL17A1Q9UMD9 CBX1P4-201ENST00000439415 457 ntBASIC5.82□□□□□ -1.48
COL17A1Q9UMD9 AL732372.2-207ENST00000445840 183 ntBASIC5.82□□□□□ -1.48
COL17A1Q9UMD9 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.82□□□□□ -1.48
COL17A1Q9UMD9 RPL7P52-201ENST00000449200 742 ntBASIC5.82□□□□□ -1.48
COL17A1Q9UMD9 SEPT14P2-201ENST00000453405 183 ntBASIC5.82□□□□□ -1.48
COL17A1Q9UMD9 FO082796.1-201ENST00000523795 183 ntBASIC5.82□□□□□ -1.48
COL17A1Q9UMD9 NCAPGP2-201ENST00000557911 754 ntBASIC5.82□□□□□ -1.48
COL17A1Q9UMD9 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.82□□□□□ -1.48
COL17A1Q9UMD9 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC5.82□□□□□ -1.48
COL17A1Q9UMD9 LARP7P3-201ENST00000579888 337 ntBASIC5.82□□□□□ -1.48
COL17A1Q9UMD9 MIR3945-201ENST00000581853 98 ntBASIC5.82□□□□□ -1.48
COL17A1Q9UMD9 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COL17A1Q9UMD9 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.82□□□□□ -1.48
COL17A1Q9UMD9 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.82□□□□□ -1.48
COL17A1Q9UMD9 AL356585.4-201ENST00000623078 1229 ntBASIC5.82□□□□□ -1.48
COL17A1Q9UMD9 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL17A1Q9UMD9 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
COL17A1Q9UMD9 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC5.82□□□□□ -1.48
COL17A1Q9UMD9 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
COL17A1Q9UMD9 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL17A1Q9UMD9 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.81□□□□□ -1.48
COL17A1Q9UMD9 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL17A1Q9UMD9 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.81□□□□□ -1.48
COL17A1Q9UMD9 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC5.81□□□□□ -1.48
COL17A1Q9UMD9 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
COL17A1Q9UMD9 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL17A1Q9UMD9 RPL23AP57-201ENST00000332361 466 ntBASIC5.81□□□□□ -1.48
COL17A1Q9UMD9 RNU6-251P-201ENST00000363235 104 ntBASIC5.81□□□□□ -1.48
COL17A1Q9UMD9 AC117470.1-201ENST00000381974 330 ntBASIC5.81□□□□□ -1.48
COL17A1Q9UMD9 NDUFB4P5-201ENST00000415445 361 ntBASIC5.81□□□□□ -1.48
COL17A1Q9UMD9 ARL5AP4-201ENST00000430731 512 ntBASIC5.81□□□□□ -1.48
COL17A1Q9UMD9 FAM103A2P-201ENST00000444122 354 ntBASIC5.81□□□□□ -1.48
COL17A1Q9UMD9 GEMIN8P3-201ENST00000445417 720 ntBASIC5.81□□□□□ -1.48
COL17A1Q9UMD9 HMGN3P1-201ENST00000453847 193 ntBASIC5.81□□□□□ -1.48
COL17A1Q9UMD9 C1DP4-201ENST00000455429 424 ntBASIC5.81□□□□□ -1.48
COL17A1Q9UMD9 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.81□□□□□ -1.48
COL17A1Q9UMD9 RPL21P71-201ENST00000465598 459 ntBASIC5.81□□□□□ -1.48
COL17A1Q9UMD9 RPS3AP50-201ENST00000487064 803 ntBASIC5.81□□□□□ -1.48
COL17A1Q9UMD9 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.81□□□□□ -1.48
COL17A1Q9UMD9 MTCYBP40-201ENST00000509390 1135 ntBASIC5.81□□□□□ -1.48
COL17A1Q9UMD9 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.81□□□□□ -1.48
COL17A1Q9UMD9 OR5B19P-201ENST00000531766 928 ntBASIC5.81□□□□□ -1.48
COL17A1Q9UMD9 MAL2-203ENST00000534619 578 ntTSL 4 BASIC5.81□□□□□ -1.48
COL17A1Q9UMD9 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC5.81□□□□□ -1.48
COL17A1Q9UMD9 AL845331.3-202ENST00000562856 261 ntBASIC5.81□□□□□ -1.48
COL17A1Q9UMD9 AC034105.3-201ENST00000565294 442 ntBASIC5.81□□□□□ -1.48
COL17A1Q9UMD9 AP001180.3-201ENST00000582221 145 ntBASIC5.81□□□□□ -1.48
COL17A1Q9UMD9 AC098479.1-201ENST00000609225 154 ntBASIC5.81□□□□□ -1.48
COL17A1Q9UMD9 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.81□□□□□ -1.48
COL17A1Q9UMD9 AC093913.1-201ENST00000614178 329 ntBASIC5.81□□□□□ -1.48
COL17A1Q9UMD9 OR11H5P-202ENST00000641612 1325 ntBASIC5.81□□□□□ -1.48
COL17A1Q9UMD9 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.81□□□□□ -1.48
COL17A1Q9UMD9 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL17A1Q9UMD9 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 AL353743.1-202ENST00000431724 1695 ntBASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 Y_RNA.135-201ENST00000363439 95 ntBASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 Y_RNA.158-201ENST00000363651 101 ntBASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 RNY4P36-201ENST00000391116 96 ntBASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 AL121834.1-202ENST00000404494 277 ntBASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 RN7SKP266-201ENST00000410232 287 ntBASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 TEX41-204ENST00000423031 491 ntTSL 4 BASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 AC008065.1-201ENST00000428525 348 ntBASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 AC096644.2-201ENST00000429278 159 ntBASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 AC009961.2-201ENST00000435771 251 ntBASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 AC093303.1-201ENST00000514549 295 ntBASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 Y_RNA.668-201ENST00000516233 93 ntBASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 RNU6-635P-201ENST00000516651 102 ntBASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 AF279873.1-201ENST00000523393 313 ntBASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 AL163153.1-201ENST00000554223 283 ntBASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 MIR544B-201ENST00000582372 78 ntBASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 AP001521.1-201ENST00000609150 300 ntBASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 uc_338.9-201ENST00000617424 182 ntBASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 AC110801.1-201ENST00000623590 212 ntBASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 API5P2-201ENST00000397055 1498 ntBASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL17A1Q9UMD9 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms