Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AL627309.6-201ENST00000606857 840 ntBASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 AP000254.1-201ENST00000609934 520 ntBASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 AC008443.7-201ENST00000622195 246 ntBASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 MIR4275-201ENST00000636486 87 ntBASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 AC092447.10-201ENST00000620607 1652 ntBASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 AC103988.1-201ENST00000566382 2177 ntBASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 GABRG2-229ENST00000641017 3628 ntBASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 AC092593.1-201ENST00000515413 1815 ntBASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 FAM133CP-201ENST00000332869 704 ntBASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 RNU5A-1-201ENST00000362698 116 ntBASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 RNU6-744P-201ENST00000365557 107 ntBASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 RNU6-1316P-201ENST00000384242 108 ntBASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 RNU6-83P-201ENST00000384568 112 ntBASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 Y_RNA.548-201ENST00000384656 105 ntBASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 MIR9-1-201ENST00000385198 89 ntBASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 MIR320C1-201ENST00000408566 88 ntBASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 RNA5SP21-201ENST00000410917 96 ntBASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 TPMTP3-201ENST00000411928 735 ntBASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 BX119904.4-201ENST00000424402 301 ntBASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 OR4K11P-201ENST00000431829 904 ntBASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 NDUFB4P6-201ENST00000436819 366 ntBASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 AL513043.1-201ENST00000439124 535 ntBASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 AC093392.2-201ENST00000450682 337 ntBASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 SNORD11.1-201ENST00000459482 85 ntBASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 RPL21P41-201ENST00000459863 264 ntBASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 RPL31P60-201ENST00000478450 367 ntBASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 AC091951.3-201ENST00000504093 246 ntBASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 AC118282.1-201ENST00000506408 765 ntBASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 RNU5A-4P-201ENST00000516588 111 ntBASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 SNORD59.2-201ENST00000516873 68 ntBASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 AC105185.1-201ENST00000518705 535 ntBASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 HPRT1P3-201ENST00000539521 576 ntBASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 AC010653.1-201ENST00000571108 881 ntBASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 AC004067.1-201ENST00000608733 700 ntBASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 AC090115.4-201ENST00000609970 188 ntBASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 AL050303.3-201ENST00000613704 284 ntBASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 AL136981.2-201ENST00000617319 734 ntBASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 AL159972.1-201ENST00000625150 448 ntBASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CLCF1Q9UBD9 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.47□□□□□ -2.01
CLCF1Q9UBD9 ZNF876P-202ENST00000398732 1485 ntBASIC2.47□□□□□ -2.01
CLCF1Q9UBD9 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.47□□□□□ -2.01
CLCF1Q9UBD9 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CLCF1Q9UBD9 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CLCF1Q9UBD9 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CLCF1Q9UBD9 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
CLCF1Q9UBD9 RNU6-157P-201ENST00000383957 107 ntBASIC2.47□□□□□ -2.01
CLCF1Q9UBD9 RNU1-101P-201ENST00000391171 127 ntBASIC2.47□□□□□ -2.01
CLCF1Q9UBD9 RNA5SP38-201ENST00000410750 119 ntBASIC2.47□□□□□ -2.01
CLCF1Q9UBD9 PPP1R11P2-201ENST00000423543 382 ntBASIC2.47□□□□□ -2.01
CLCF1Q9UBD9 AC019097.1-201ENST00000424783 735 ntBASIC2.47□□□□□ -2.01
CLCF1Q9UBD9 AC063976.3-201ENST00000426849 329 ntBASIC2.47□□□□□ -2.01
CLCF1Q9UBD9 TXNL1P1-201ENST00000429528 554 ntBASIC2.47□□□□□ -2.01
CLCF1Q9UBD9 AL356867.1-201ENST00000429623 299 ntBASIC2.47□□□□□ -2.01
CLCF1Q9UBD9 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.47□□□□□ -2.01
CLCF1Q9UBD9 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CLCF1Q9UBD9 RPL21P2-201ENST00000440049 481 ntBASIC2.47□□□□□ -2.01
CLCF1Q9UBD9 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.47□□□□□ -2.01
CLCF1Q9UBD9 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.47□□□□□ -2.01
CLCF1Q9UBD9 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.47□□□□□ -2.01
CLCF1Q9UBD9 HSPE1P6-201ENST00000479457 291 ntBASIC2.47□□□□□ -2.01
CLCF1Q9UBD9 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.47□□□□□ -2.01
CLCF1Q9UBD9 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.47□□□□□ -2.01
CLCF1Q9UBD9 AC020699.1-201ENST00000505161 445 ntBASIC2.47□□□□□ -2.01
CLCF1Q9UBD9 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.47□□□□□ -2.01
CLCF1Q9UBD9 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.47□□□□□ -2.01
CLCF1Q9UBD9 AC034159.1-201ENST00000513885 583 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms