Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.23□□□□□ -1.73
KCMF1Q9P0J7 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.23□□□□□ -1.73
KCMF1Q9P0J7 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.23□□□□□ -1.73
KCMF1Q9P0J7 OR11H5P-201ENST00000554039 926 ntBASIC4.23□□□□□ -1.73
KCMF1Q9P0J7 OR4H12P-201ENST00000556269 907 ntBASIC4.23□□□□□ -1.73
KCMF1Q9P0J7 BNIP3P5-201ENST00000562290 498 ntBASIC4.23□□□□□ -1.73
KCMF1Q9P0J7 ATP5J2P6-201ENST00000565203 266 ntBASIC4.23□□□□□ -1.73
KCMF1Q9P0J7 AC093249.1-201ENST00000567049 203 ntBASIC4.23□□□□□ -1.73
KCMF1Q9P0J7 BNIP3P22-201ENST00000593399 556 ntBASIC4.23□□□□□ -1.73
KCMF1Q9P0J7 AL138889.2-201ENST00000603883 242 ntBASIC4.23□□□□□ -1.73
KCMF1Q9P0J7 APOOP1-201ENST00000604695 592 ntBASIC4.23□□□□□ -1.73
KCMF1Q9P0J7 AC245389.1-201ENST00000605141 529 ntBASIC4.23□□□□□ -1.73
KCMF1Q9P0J7 AC007619.2-201ENST00000605743 379 ntBASIC4.23□□□□□ -1.73
KCMF1Q9P0J7 AP005019.3-201ENST00000620418 560 ntBASIC4.23□□□□□ -1.73
KCMF1Q9P0J7 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
KCMF1Q9P0J7 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.23□□□□□ -1.73
KCMF1Q9P0J7 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.23□□□□□ -1.73
KCMF1Q9P0J7 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.23□□□□□ -1.73
KCMF1Q9P0J7 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
KCMF1Q9P0J7 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.23□□□□□ -1.73
KCMF1Q9P0J7 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 RNU1-20P-201ENST00000363314 162 ntBASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 Y_RNA.315-201ENST00000365117 102 ntBASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 RNA5SP219-201ENST00000390940 113 ntBASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 RNU6-882P-201ENST00000391025 103 ntBASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 RNU4-14P-201ENST00000410858 122 ntBASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 RPS12P23-201ENST00000419579 400 ntBASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 AL139095.3-201ENST00000419672 1203 ntBASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 EIF4EP1-201ENST00000422311 642 ntBASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 NDUFA5P4-201ENST00000436704 385 ntBASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 BRK1P2-201ENST00000442875 223 ntBASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 RPL23AP65-201ENST00000475608 468 ntBASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 RPL7P43-201ENST00000478876 753 ntBASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 AC108022.1-201ENST00000493466 478 ntBASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 RNU6-189P-201ENST00000516120 101 ntBASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 AL121603.1-201ENST00000553815 142 ntBASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 MIR4277-201ENST00000578298 84 ntBASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 MIR4284-201ENST00000578924 81 ntBASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 DPPA3P3-201ENST00000603842 430 ntBASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 AC104662.1-201ENST00000604448 511 ntBASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 AC010201.1-201ENST00000605051 540 ntBASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 AC020634.1-201ENST00000608701 549 ntBASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 AC090971.5-201ENST00000621102 293 ntBASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 AL359757.2-201ENST00000624309 274 ntBASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 MAPK10-303ENST00000641324 3959 ntBASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 AC010300.1-201ENST00000600671 5134 ntBASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
KCMF1Q9P0J7 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
KCMF1Q9P0J7 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
KCMF1Q9P0J7 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
KCMF1Q9P0J7 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.21□□□□□ -1.74
KCMF1Q9P0J7 RNA5SP447-201ENST00000363749 119 ntBASIC4.21□□□□□ -1.74
KCMF1Q9P0J7 Y_RNA.339-201ENST00000365325 102 ntBASIC4.21□□□□□ -1.74
KCMF1Q9P0J7 RNU6-190P-201ENST00000384154 102 ntBASIC4.21□□□□□ -1.74
KCMF1Q9P0J7 U3.22-201ENST00000391120 215 ntBASIC4.21□□□□□ -1.74
KCMF1Q9P0J7 EIF4E2P1-201ENST00000393781 255 ntBASIC4.21□□□□□ -1.74
KCMF1Q9P0J7 RN7SKP167-201ENST00000411047 285 ntBASIC4.21□□□□□ -1.74
KCMF1Q9P0J7 AC092809.3-201ENST00000415453 231 ntBASIC4.21□□□□□ -1.74
KCMF1Q9P0J7 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.21□□□□□ -1.74
KCMF1Q9P0J7 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.21□□□□□ -1.74
KCMF1Q9P0J7 C4BPAP2-201ENST00000428434 478 ntBASIC4.21□□□□□ -1.74
KCMF1Q9P0J7 RPL23AP25-201ENST00000430973 463 ntBASIC4.21□□□□□ -1.74
KCMF1Q9P0J7 RPS3AP52-201ENST00000435639 297 ntBASIC4.21□□□□□ -1.74
KCMF1Q9P0J7 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.21□□□□□ -1.74
KCMF1Q9P0J7 MTND4P19-201ENST00000446659 478 ntBASIC4.21□□□□□ -1.74
KCMF1Q9P0J7 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.21□□□□□ -1.74
KCMF1Q9P0J7 AC107399.1-201ENST00000451226 265 ntBASIC4.21□□□□□ -1.74
KCMF1Q9P0J7 RN7SL860P-201ENST00000473738 223 ntBASIC4.21□□□□□ -1.74
KCMF1Q9P0J7 AC068587.1-201ENST00000483613 781 ntBASIC4.21□□□□□ -1.74
KCMF1Q9P0J7 TRBVA-201ENST00000498804 316 ntBASIC4.21□□□□□ -1.74
KCMF1Q9P0J7 RNU6-1170P-201ENST00000515974 106 ntBASIC4.21□□□□□ -1.74
KCMF1Q9P0J7 Y_RNA.689-201ENST00000516589 107 ntBASIC4.21□□□□□ -1.74
KCMF1Q9P0J7 AC090151.1-201ENST00000520784 730 ntBASIC4.21□□□□□ -1.74
KCMF1Q9P0J7 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.21□□□□□ -1.74
KCMF1Q9P0J7 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
KCMF1Q9P0J7 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 297.7 ms