Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 RPL7AP25-201ENST00000423357 805 ntBASIC4.21□□□□□ -1.74
MKS1Q9NXB0 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.21□□□□□ -1.74
MKS1Q9NXB0 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.21□□□□□ -1.74
MKS1Q9NXB0 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.21□□□□□ -1.74
MKS1Q9NXB0 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
MKS1Q9NXB0 AL162151.2-201ENST00000448875 158 ntBASIC4.21□□□□□ -1.74
MKS1Q9NXB0 FABP5P13-201ENST00000452144 328 ntBASIC4.21□□□□□ -1.74
MKS1Q9NXB0 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.21□□□□□ -1.74
MKS1Q9NXB0 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.21□□□□□ -1.74
MKS1Q9NXB0 SNRPGP3-201ENST00000469405 227 ntBASIC4.21□□□□□ -1.74
MKS1Q9NXB0 VN1R17P-201ENST00000472048 1090 ntBASIC4.21□□□□□ -1.74
MKS1Q9NXB0 EIF4EP3-201ENST00000498782 656 ntBASIC4.21□□□□□ -1.74
MKS1Q9NXB0 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.21□□□□□ -1.74
MKS1Q9NXB0 AC098591.2-201ENST00000510152 315 ntBASIC4.21□□□□□ -1.74
MKS1Q9NXB0 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.21□□□□□ -1.74
MKS1Q9NXB0 RNU6-927P-201ENST00000516199 100 ntBASIC4.21□□□□□ -1.74
MKS1Q9NXB0 SNORA70.16-201ENST00000516390 95 ntBASIC4.21□□□□□ -1.74
MKS1Q9NXB0 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.21□□□□□ -1.74
MKS1Q9NXB0 SUMO2P20-201ENST00000520803 283 ntBASIC4.21□□□□□ -1.74
MKS1Q9NXB0 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.21□□□□□ -1.74
MKS1Q9NXB0 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.21□□□□□ -1.74
MKS1Q9NXB0 AL121579.1-201ENST00000555129 305 ntBASIC4.21□□□□□ -1.74
MKS1Q9NXB0 AL138976.2-201ENST00000563989 694 ntBASIC4.21□□□□□ -1.74
MKS1Q9NXB0 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.21□□□□□ -1.74
MKS1Q9NXB0 MIR4646-201ENST00000580775 63 ntBASIC4.21□□□□□ -1.74
MKS1Q9NXB0 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.21□□□□□ -1.74
MKS1Q9NXB0 AC008945.2-201ENST00000606056 604 ntBASIC4.21□□□□□ -1.74
MKS1Q9NXB0 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.21□□□□□ -1.74
MKS1Q9NXB0 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
MKS1Q9NXB0 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
MKS1Q9NXB0 ZNF962P-201ENST00000443465 3140 ntBASIC4.21□□□□□ -1.74
MKS1Q9NXB0 HSPA8P1-201ENST00000425843 1833 ntBASIC4.21□□□□□ -1.74
MKS1Q9NXB0 AL354685.2-201ENST00000448218 1447 ntBASIC4.21□□□□□ -1.74
MKS1Q9NXB0 AC103710.2-202ENST00000641454 2853 ntBASIC4.2□□□□□ -1.74
MKS1Q9NXB0 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
MKS1Q9NXB0 OR5P1P-201ENST00000299512 925 ntBASIC4.2□□□□□ -1.74
MKS1Q9NXB0 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
MKS1Q9NXB0 MT-TL1-201ENST00000386347 75 ntBASIC4.2□□□□□ -1.74
MKS1Q9NXB0 SNORA11F-201ENST00000408237 128 ntBASIC4.2□□□□□ -1.74
MKS1Q9NXB0 MIR1290-201ENST00000408735 78 ntBASIC4.2□□□□□ -1.74
MKS1Q9NXB0 RN7SKP106-201ENST00000410832 272 ntBASIC4.2□□□□□ -1.74
MKS1Q9NXB0 RPL27AP8-201ENST00000424277 446 ntBASIC4.2□□□□□ -1.74
MKS1Q9NXB0 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.2□□□□□ -1.74
MKS1Q9NXB0 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.2□□□□□ -1.74
MKS1Q9NXB0 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.2□□□□□ -1.74
MKS1Q9NXB0 RPL23AP81-201ENST00000455252 467 ntBASIC4.2□□□□□ -1.74
MKS1Q9NXB0 RNU6-953P-201ENST00000459154 107 ntBASIC4.2□□□□□ -1.74
MKS1Q9NXB0 RPL12P20-201ENST00000475538 479 ntBASIC4.2□□□□□ -1.74
MKS1Q9NXB0 RPL38P4-201ENST00000502376 214 ntBASIC4.2□□□□□ -1.74
MKS1Q9NXB0 RBBP4P6-201ENST00000508098 202 ntBASIC4.2□□□□□ -1.74
MKS1Q9NXB0 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.2□□□□□ -1.74
MKS1Q9NXB0 MIR2114-201ENST00000516645 80 ntBASIC4.2□□□□□ -1.74
MKS1Q9NXB0 RNU6-677P-201ENST00000516914 101 ntBASIC4.2□□□□□ -1.74
MKS1Q9NXB0 RNU6-685P-201ENST00000517088 95 ntBASIC4.2□□□□□ -1.74
MKS1Q9NXB0 IGKV2-38-201ENST00000517443 247 ntBASIC4.2□□□□□ -1.74
MKS1Q9NXB0 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.2□□□□□ -1.74
MKS1Q9NXB0 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.2□□□□□ -1.74
MKS1Q9NXB0 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.2□□□□□ -1.74
MKS1Q9NXB0 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.2□□□□□ -1.74
MKS1Q9NXB0 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
MKS1Q9NXB0 AC107016.1-201ENST00000550463 337 ntBASIC4.2□□□□□ -1.74
MKS1Q9NXB0 AC008521.1-201ENST00000587471 187 ntBASIC4.2□□□□□ -1.74
MKS1Q9NXB0 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.2□□□□□ -1.74
MKS1Q9NXB0 AC006023.2-201ENST00000609916 167 ntBASIC4.2□□□□□ -1.74
MKS1Q9NXB0 AC012409.4-201ENST00000612923 249 ntBASIC4.2□□□□□ -1.74
MKS1Q9NXB0 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.2□□□□□ -1.74
MKS1Q9NXB0 MTND5P42-201ENST00000637720 498 ntBASIC4.2□□□□□ -1.74
MKS1Q9NXB0 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
MKS1Q9NXB0 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
MKS1Q9NXB0 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
MKS1Q9NXB0 AC131971.1-201ENST00000332881 1482 ntBASIC4.19□□□□□ -1.74
MKS1Q9NXB0 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
MKS1Q9NXB0 RNU6-1287P-201ENST00000362914 107 ntBASIC4.19□□□□□ -1.74
MKS1Q9NXB0 RNU6-190P-201ENST00000384154 102 ntBASIC4.19□□□□□ -1.74
MKS1Q9NXB0 RNU6-1060P-201ENST00000384664 107 ntBASIC4.19□□□□□ -1.74
MKS1Q9NXB0 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
MKS1Q9NXB0 UBE2V1P2-201ENST00000397758 440 ntBASIC4.19□□□□□ -1.74
MKS1Q9NXB0 AL138878.1-201ENST00000405131 347 ntBASIC4.19□□□□□ -1.74
MKS1Q9NXB0 HSPE1P26-201ENST00000405341 275 ntBASIC4.19□□□□□ -1.74
MKS1Q9NXB0 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.19□□□□□ -1.74
MKS1Q9NXB0 AC068533.1-201ENST00000418542 415 ntBASIC4.19□□□□□ -1.74
MKS1Q9NXB0 NDUFB4P7-201ENST00000423198 363 ntBASIC4.19□□□□□ -1.74
MKS1Q9NXB0 CALM2P2-201ENST00000428512 440 ntBASIC4.19□□□□□ -1.74
MKS1Q9NXB0 AL356867.1-201ENST00000429623 299 ntBASIC4.19□□□□□ -1.74
MKS1Q9NXB0 ATP5HP2-201ENST00000433885 485 ntBASIC4.19□□□□□ -1.74
MKS1Q9NXB0 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.19□□□□□ -1.74
MKS1Q9NXB0 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.19□□□□□ -1.74
MKS1Q9NXB0 MTND3P10-201ENST00000450967 341 ntBASIC4.19□□□□□ -1.74
MKS1Q9NXB0 ELOCP23-201ENST00000452014 332 ntBASIC4.19□□□□□ -1.74
MKS1Q9NXB0 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.19□□□□□ -1.74
MKS1Q9NXB0 RN7SL481P-201ENST00000477764 299 ntBASIC4.19□□□□□ -1.74
MKS1Q9NXB0 RPL31P61-201ENST00000496160 376 ntBASIC4.19□□□□□ -1.74
MKS1Q9NXB0 AC117522.3-201ENST00000507974 584 ntBASIC4.19□□□□□ -1.74
MKS1Q9NXB0 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.19□□□□□ -1.74
MKS1Q9NXB0 RNU6-123P-201ENST00000516163 102 ntBASIC4.19□□□□□ -1.74
MKS1Q9NXB0 SNORA20.3-201ENST00000516880 132 ntBASIC4.19□□□□□ -1.74
MKS1Q9NXB0 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.19□□□□□ -1.74
MKS1Q9NXB0 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.19□□□□□ -1.74
MKS1Q9NXB0 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.19□□□□□ -1.74
MKS1Q9NXB0 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms