Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 TTC39CP1-201ENST00000512513 755 ntBASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 VN1R85P-201ENST00000601587 426 ntBASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 AL136363.1-201ENST00000605349 337 ntBASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 AC018638.7-201ENST00000605836 1114 ntBASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 AC239868.4-201ENST00000608318 671 ntBASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 AC009159.2-201ENST00000617603 606 ntBASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 AC073308.1-201ENST00000623696 305 ntBASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 AC079248.2-201ENST00000623779 326 ntBASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 AC068724.3-201ENST00000625906 87 ntBASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 AC073476.4-201ENST00000628409 72 ntBASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 AC017071.1-201ENST00000564407 2204 ntBASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 AC008669.1-201ENST00000565823 2178 ntBASIC3.15□□□□□ -1.9
CHCHD3Q9NX63 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CHCHD3Q9NX63 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 Y_RNA.97-201ENST00000363094 102 ntBASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 RNA5SP252-201ENST00000391131 119 ntBASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 AL049545.1-201ENST00000401856 572 ntBASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 AL353777.1-201ENST00000425552 326 ntBASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 RPL21P89-201ENST00000444021 467 ntBASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 AC020550.1-201ENST00000447385 163 ntBASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 AC010099.1-201ENST00000455434 375 ntBASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 AC008571.1-201ENST00000467232 300 ntBASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 AC010460.1-201ENST00000507087 466 ntBASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 FTH1P21-201ENST00000512179 511 ntBASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 RNU6-927P-201ENST00000516199 100 ntBASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 RNU6-826P-201ENST00000516827 104 ntBASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 LRRC34P1-201ENST00000542742 915 ntBASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 AC005951.2-201ENST00000576282 495 ntBASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 RPL12P50-201ENST00000603116 116 ntBASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 NUTF2P8-201ENST00000604593 363 ntBASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 AL355816.2-201ENST00000610049 647 ntBASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 AL360219.1-201ENST00000610230 366 ntBASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 MIR6867-201ENST00000610636 67 ntBASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 AL355493.4-201ENST00000618530 292 ntBASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 AC244100.1-202ENST00000621554 382 ntBASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 PABPC1P9-201ENST00000426076 1612 ntBASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CHCHD3Q9NX63 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.14□□□□□ -1.91
CHCHD3Q9NX63 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.14□□□□□ -1.91
CHCHD3Q9NX63 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CHCHD3Q9NX63 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.14□□□□□ -1.91
CHCHD3Q9NX63 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.14□□□□□ -1.91
CHCHD3Q9NX63 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CHCHD3Q9NX63 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CHCHD3Q9NX63 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.14□□□□□ -1.91
CHCHD3Q9NX63 RNU6-213P-201ENST00000384051 104 ntBASIC3.14□□□□□ -1.91
CHCHD3Q9NX63 RNU1-13P-201ENST00000384499 162 ntBASIC3.14□□□□□ -1.91
CHCHD3Q9NX63 RNA5SP317-201ENST00000410176 116 ntBASIC3.14□□□□□ -1.91
CHCHD3Q9NX63 RN7SKP159-201ENST00000410657 292 ntBASIC3.14□□□□□ -1.91
CHCHD3Q9NX63 RNU2-62P-201ENST00000410868 191 ntBASIC3.14□□□□□ -1.91
CHCHD3Q9NX63 RNA5SP311-201ENST00000411290 116 ntBASIC3.14□□□□□ -1.91
CHCHD3Q9NX63 AL356968.1-201ENST00000416622 474 ntBASIC3.14□□□□□ -1.91
CHCHD3Q9NX63 VPS26BP1-201ENST00000417155 755 ntBASIC3.14□□□□□ -1.91
CHCHD3Q9NX63 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.14□□□□□ -1.91
CHCHD3Q9NX63 AC005005.2-201ENST00000420779 380 ntBASIC3.14□□□□□ -1.91
CHCHD3Q9NX63 AC006366.1-201ENST00000422002 759 ntBASIC3.14□□□□□ -1.91
CHCHD3Q9NX63 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.14□□□□□ -1.91
CHCHD3Q9NX63 RPL7P2-201ENST00000427639 268 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms