Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 PIGFP3-201ENST00000441918 722 ntBASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 AC115115.1-201ENST00000449927 248 ntBASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 SNRPGP6-201ENST00000451124 220 ntBASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 AC010099.1-201ENST00000455434 375 ntBASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 AC013267.1-201ENST00000458227 267 ntBASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 AC034236.1-201ENST00000469891 373 ntBASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 BZW1P2-201ENST00000473537 826 ntBASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 RPS4XP22-201ENST00000480755 780 ntBASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 AC005178.1-201ENST00000508392 440 ntBASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 MTND4LP18-201ENST00000526864 291 ntBASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 AC123904.3-201ENST00000547218 814 ntBASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 AC011611.1-201ENST00000552179 197 ntBASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 AC012435.1-202ENST00000568772 240 ntBASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 KC877982.1-201ENST00000602313 470 ntBASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 ELOCP35-201ENST00000604289 336 ntBASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 AC008277.2-201ENST00000605196 797 ntBASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 Z99289.3-201ENST00000605586 594 ntBASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 AC122133.1-201ENST00000613964 233 ntBASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 AL157817.1-201ENST00000614264 790 ntBASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 Y_RNA.46-201ENST00000362695 102 ntBASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 RNU6-1027P-201ENST00000383998 107 ntBASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 RNVU1-14-201ENST00000384770 164 ntBASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 CCNG1P1-201ENST00000406783 885 ntBASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 RNU2-62P-201ENST00000410868 191 ntBASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 RNA5SP107-201ENST00000411358 122 ntBASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 RPL31P12-201ENST00000422587 358 ntBASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 AC092047.1-201ENST00000424997 240 ntBASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 AL353777.1-201ENST00000425552 326 ntBASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 AL365184.2-201ENST00000431139 435 ntBASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 AL358232.1-201ENST00000448030 501 ntBASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 AC068587.2-201ENST00000478386 781 ntBASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 MTND5P13-201ENST00000513046 1079 ntBASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 AC007115.1-201ENST00000546853 234 ntBASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 AL356432.3-201ENST00000568952 465 ntBASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 AL359999.1-201ENST00000604513 294 ntBASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 AL355472.4-201ENST00000610233 626 ntBASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 AC004852.3-201ENST00000614131 326 ntBASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 AL603755.1-201ENST00000619504 163 ntBASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
BLOC1S4Q9NUP1 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
BLOC1S4Q9NUP1 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.59□□□□□ -1.84
BLOC1S4Q9NUP1 AC091564.4-201ENST00000533934 2194 ntBASIC3.58□□□□□ -1.84
BLOC1S4Q9NUP1 AC010680.1-201ENST00000590024 3590 ntBASIC3.58□□□□□ -1.84
BLOC1S4Q9NUP1 SNORD56.3-201ENST00000363507 71 ntBASIC3.58□□□□□ -1.84
BLOC1S4Q9NUP1 RNU5F-7P-201ENST00000363696 115 ntBASIC3.58□□□□□ -1.84
BLOC1S4Q9NUP1 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
BLOC1S4Q9NUP1 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.58□□□□□ -1.84
BLOC1S4Q9NUP1 UBE2D3P1-201ENST00000436669 444 ntBASIC3.58□□□□□ -1.84
BLOC1S4Q9NUP1 BNIP3P2-201ENST00000441221 577 ntBASIC3.58□□□□□ -1.84
BLOC1S4Q9NUP1 AC020550.1-201ENST00000447385 163 ntBASIC3.58□□□□□ -1.84
BLOC1S4Q9NUP1 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC3.58□□□□□ -1.84
BLOC1S4Q9NUP1 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.58□□□□□ -1.84
BLOC1S4Q9NUP1 RPL37P6-201ENST00000460682 294 ntBASIC3.58□□□□□ -1.84
BLOC1S4Q9NUP1 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
BLOC1S4Q9NUP1 AC010631.1-201ENST00000474150 156 ntBASIC3.58□□□□□ -1.84
BLOC1S4Q9NUP1 AC006483.1-201ENST00000487308 313 ntBASIC3.58□□□□□ -1.84
BLOC1S4Q9NUP1 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.58□□□□□ -1.84
BLOC1S4Q9NUP1 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.58□□□□□ -1.84
BLOC1S4Q9NUP1 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
BLOC1S4Q9NUP1 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.58□□□□□ -1.84
BLOC1S4Q9NUP1 RNU6-927P-201ENST00000516199 100 ntBASIC3.58□□□□□ -1.84
BLOC1S4Q9NUP1 AC145350.1-201ENST00000567426 208 ntBASIC3.58□□□□□ -1.84
BLOC1S4Q9NUP1 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.58□□□□□ -1.84
BLOC1S4Q9NUP1 AL353778.1-201ENST00000603149 408 ntBASIC3.58□□□□□ -1.84
BLOC1S4Q9NUP1 AC121334.2-201ENST00000605387 271 ntBASIC3.58□□□□□ -1.84
BLOC1S4Q9NUP1 AC239868.4-201ENST00000608318 671 ntBASIC3.58□□□□□ -1.84
BLOC1S4Q9NUP1 AC245517.5-201ENST00000611529 162 ntBASIC3.58□□□□□ -1.84
BLOC1S4Q9NUP1 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.58□□□□□ -1.84
BLOC1S4Q9NUP1 AC012314.7-201ENST00000619693 93 ntBASIC3.58□□□□□ -1.84
BLOC1S4Q9NUP1 AC092628.2-201ENST00000622492 339 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms