Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AC007151.1-201ENST00000572774 483 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 AC105245.1-201ENST00000581934 244 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 AC010928.2-201ENST00000588017 287 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 AC009314.1-201ENST00000603871 304 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 AC100814.1-201ENST00000606963 623 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 AC126118.1-201ENST00000607744 628 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 AC069294.1-201ENST00000608397 350 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 AL138478.1-201ENST00000612252 832 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 MIR6071-201ENST00000616741 78 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 AC138932.5-201ENST00000617759 563 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 AC097460.3-201ENST00000623099 442 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 AC073592.7-201ENST00000623659 507 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 PISRT1-201ENST00000626175 531 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 AC116618.1-201ENST00000634617 774 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 MIR4275-201ENST00000636486 87 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 AC087821.2-201ENST00000637086 450 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 MIR1322-201ENST00000638013 71 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 MKKS-204ENST00000639674 192 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 AC005539.1-201ENST00000443768 1479 ntBASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 RNU6-1159P-201ENST00000362933 107 ntBASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 RNU6-216P-201ENST00000363282 104 ntBASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 RNA5SP456-201ENST00000364002 114 ntBASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 U6.112-201ENST00000384129 70 ntBASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 RNU6-748P-201ENST00000384648 107 ntBASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 RN7SKP140-201ENST00000411196 284 ntBASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 USP9YP19-201ENST00000412165 485 ntBASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 USP9YP13-201ENST00000417797 480 ntBASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 AL451054.2-201ENST00000420896 202 ntBASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 AC096920.1-201ENST00000423991 241 ntBASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 ZYG11AP1-201ENST00000430329 837 ntBASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 RPS20P5-201ENST00000434808 360 ntBASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 AC092393.1-201ENST00000439625 742 ntBASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 RPL23AP6-201ENST00000446637 472 ntBASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 snoU109.1-201ENST00000459339 135 ntBASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 RPL7P49-201ENST00000471402 708 ntBASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 AC092902.1-201ENST00000486999 259 ntBASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 AC104685.1-201ENST00000502445 371 ntBASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 AF213884.2-201ENST00000510417 903 ntBASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 AC026436.1-201ENST00000510537 270 ntBASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 AC026402.1-201ENST00000513642 170 ntBASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 RN7SKP132-201ENST00000516001 208 ntBASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 RNA5SP96-201ENST00000516041 107 ntBASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 RNA5SP291-201ENST00000517222 105 ntBASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 AP003730.1-201ENST00000524605 285 ntBASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 AC138915.2-201ENST00000569776 97 ntBASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 MIR4286-201ENST00000580651 93 ntBASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 AP001269.3-201ENST00000588718 329 ntBASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 AC005261.5-201ENST00000596280 355 ntBASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 AC067747.1-201ENST00000608026 250 ntBASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 AL121652.1-201ENST00000608851 448 ntBASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 MIR8084-201ENST00000614105 89 ntBASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 AC114781.5-201ENST00000615297 108 ntBASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 AC009233.1-201ENST00000616477 371 ntBASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 U4atac.1-201ENST00000618345 95 ntBASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 AL159972.1-201ENST00000625150 448 ntBASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 ABBA01000935.2-201ENST00000637477 838 ntBASIC1.14□□□□□ -2.23
CDC42SE1Q9NRR8 AC096644.4-201ENST00000563417 2912 ntBASIC1.13□□□□□ -2.23
CDC42SE1Q9NRR8 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
CDC42SE1Q9NRR8 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
CDC42SE1Q9NRR8 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC1.13□□□□□ -2.23
CDC42SE1Q9NRR8 RNU4-35P-201ENST00000362588 141 ntBASIC1.13□□□□□ -2.23
CDC42SE1Q9NRR8 RNA5SP242-201ENST00000364171 118 ntBASIC1.13□□□□□ -2.23
CDC42SE1Q9NRR8 RNU6-343P-201ENST00000364709 104 ntBASIC1.13□□□□□ -2.23
CDC42SE1Q9NRR8 RNA5SP51-201ENST00000364750 119 ntBASIC1.13□□□□□ -2.23
CDC42SE1Q9NRR8 RNA5SP160-201ENST00000364866 120 ntBASIC1.13□□□□□ -2.23
CDC42SE1Q9NRR8 SNORA23-201ENST00000365128 182 ntBASIC1.13□□□□□ -2.23
CDC42SE1Q9NRR8 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
CDC42SE1Q9NRR8 SNORA17A-201ENST00000391185 133 ntBASIC1.13□□□□□ -2.23
CDC42SE1Q9NRR8 AL591416.1-201ENST00000404015 867 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms