Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 RNU6-1050P-201ENST00000410388 107 ntBASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 RNU4-6P-201ENST00000410804 122 ntBASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 RNA5SP111-201ENST00000411386 101 ntBASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 AC099336.2-201ENST00000422457 254 ntBASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 RPL30P3-201ENST00000424262 333 ntBASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 AC236972.1-201ENST00000433225 199 ntBASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 RPL21P112-201ENST00000434403 463 ntBASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 CEACAMP1-201ENST00000434624 1035 ntBASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 Z98949.2-201ENST00000440996 144 ntBASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 TDGF1P1-201ENST00000445734 527 ntBASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 AC099560.2-201ENST00000457554 255 ntBASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 AC128713.1-201ENST00000471495 306 ntBASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 SCARNA22-201ENST00000503991 125 ntBASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 AC116337.1-201ENST00000509680 687 ntBASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 RNU6-699P-201ENST00000517081 110 ntBASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 MIR4700-201ENST00000578311 74 ntBASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 U2.17-201ENST00000611454 95 ntBASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 SNX18P1Y-201ENST00000616231 511 ntBASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 AC011978.2-201ENST00000569835 2054 ntBASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 AL592182.3-201ENST00000642132 3304 ntBASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SEC61A2Q9H9S3 SDAD1P1-202ENST00000524156 2051 ntBASIC4.15□□□□□ -1.74
SEC61A2Q9H9S3 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
SEC61A2Q9H9S3 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SEC61A2Q9H9S3 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.15□□□□□ -1.74
SEC61A2Q9H9S3 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 Y_RNA.252-201ENST00000364556 101 ntBASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 RNU6-593P-201ENST00000364716 112 ntBASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 RNU6-701P-201ENST00000384059 107 ntBASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 Y_RNA.476-201ENST00000384347 108 ntBASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 Y_RNA.496-201ENST00000384444 101 ntBASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 SNORD3H-201ENST00000384486 214 ntBASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 MT-TG-201ENST00000387429 68 ntBASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 Y_RNA.594-201ENST00000410373 140 ntBASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 RNU6-387P-201ENST00000411331 105 ntBASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 RPL21P109-201ENST00000422213 475 ntBASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 DPH3P2-201ENST00000422618 250 ntBASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 RPS12P5-201ENST00000423449 371 ntBASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 NRBF2P3-201ENST00000432731 865 ntBASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 AC005154.2-201ENST00000438110 379 ntBASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 H2AFZP5-201ENST00000446960 382 ntBASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 AC010655.1-201ENST00000449336 292 ntBASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 PPIAP3-201ENST00000450588 505 ntBASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 CECR9-201ENST00000453421 199 ntBASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 RPS20P21-201ENST00000466859 343 ntBASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 RPL12P20-201ENST00000475538 479 ntBASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 RN7SL432P-201ENST00000484057 298 ntBASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 AC015911.1-201ENST00000495111 156 ntBASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 AC026782.1-201ENST00000512952 449 ntBASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 Y_RNA.708-201ENST00000516950 96 ntBASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 RNU6-685P-201ENST00000517088 95 ntBASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 HMGN1P28-201ENST00000521340 364 ntBASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 SETP7-201ENST00000552169 453 ntBASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 AC090115.3-201ENST00000553218 849 ntBASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 RPL21P7-201ENST00000557463 483 ntBASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 RN7SL652P-201ENST00000577769 300 ntBASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 MIR4270-201ENST00000581799 70 ntBASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 MIR6853-201ENST00000619642 74 ntBASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 AC010300.1-201ENST00000600671 5134 ntBASIC4.15□□□□□ -1.75
SEC61A2Q9H9S3 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms